BLASTX nr result

ID: Coptis21_contig00006206 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00006206
         (677 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002317354.1| predicted protein [Populus trichocarpa] gi|1...   121   1e-25
ref|XP_002866085.1| ATP synthase subunit H family protein [Arabi...   121   1e-25
emb|CAD27522.1| vacuolar ATPase subunit e-like [Mesembryanthemum...   120   2e-25
ref|NP_568823.1| ATPase, V0 complex, subunit E [Arabidopsis thal...   120   2e-25
ref|XP_003532155.1| PREDICTED: uncharacterized protein LOC100527...   120   3e-25

>ref|XP_002317354.1| predicted protein [Populus trichocarpa] gi|118481681|gb|ABK92781.1|
           unknown [Populus trichocarpa]
           gi|222860419|gb|EEE97966.1| predicted protein [Populus
           trichocarpa]
          Length = 70

 Score =  121 bits (304), Expect = 1e-25
 Identities = 56/68 (82%), Positives = 63/68 (92%)
 Frame = -1

Query: 476 MGFLLTSLIFLVVGIVAALFMRICCNRGPSANLLHLTLVITAVVCCWLMWAIVYLAQMKP 297
           MGFL+T+LIF+VVGI+A+L  RICCNRGPS NLLHLTLV+TA VCCW+MWAIVYLAQMKP
Sbjct: 1   MGFLVTTLIFVVVGIIASLCTRICCNRGPSTNLLHLTLVLTATVCCWMMWAIVYLAQMKP 60

Query: 296 LINPILSE 273
           LI PILSE
Sbjct: 61  LIVPILSE 68


>ref|XP_002866085.1| ATP synthase subunit H family protein [Arabidopsis lyrata subsp.
           lyrata] gi|297311920|gb|EFH42344.1| ATP synthase subunit
           H family protein [Arabidopsis lyrata subsp. lyrata]
          Length = 70

 Score =  121 bits (303), Expect = 1e-25
 Identities = 56/68 (82%), Positives = 62/68 (91%)
 Frame = -1

Query: 476 MGFLLTSLIFLVVGIVAALFMRICCNRGPSANLLHLTLVITAVVCCWLMWAIVYLAQMKP 297
           MGFL+T+LIF+VVGI+AAL  RICCNRGPS NLLHLTLVITA VCCW+MWAIVY+AQM P
Sbjct: 1   MGFLITTLIFVVVGIIAALCARICCNRGPSTNLLHLTLVITATVCCWMMWAIVYIAQMNP 60

Query: 296 LINPILSE 273
           LI PILSE
Sbjct: 61  LIVPILSE 68


>emb|CAD27522.1| vacuolar ATPase subunit e-like [Mesembryanthemum crystallinum]
          Length = 70

 Score =  120 bits (302), Expect = 2e-25
 Identities = 55/68 (80%), Positives = 63/68 (92%)
 Frame = -1

Query: 476 MGFLLTSLIFLVVGIVAALFMRICCNRGPSANLLHLTLVITAVVCCWLMWAIVYLAQMKP 297
           MGFL+T+LIFLV+GI+A+L  RIC NRGPS NLLHLTLV+TA VCCW+MWAIVYLAQMKP
Sbjct: 1   MGFLITTLIFLVIGIIASLCTRICFNRGPSTNLLHLTLVLTATVCCWMMWAIVYLAQMKP 60

Query: 296 LINPILSE 273
           LINPIL+E
Sbjct: 61  LINPILNE 68


>ref|NP_568823.1| ATPase, V0 complex, subunit E [Arabidopsis thaliana]
           gi|238481571|ref|NP_001154781.1| ATPase, V0 complex,
           subunit E [Arabidopsis thaliana]
           gi|13926255|gb|AAK49600.1|AF372884_1 AT5g55290/MCO15_24
           [Arabidopsis thaliana] gi|9758126|dbj|BAB08598.1|
           unnamed protein product [Arabidopsis thaliana]
           gi|16323226|gb|AAL15347.1| AT5g55290/MCO15_24
           [Arabidopsis thaliana] gi|227204441|dbj|BAH57072.1|
           AT5G55290 [Arabidopsis thaliana]
           gi|332009227|gb|AED96610.1| ATPase, V0 complex, subunit
           E [Arabidopsis thaliana] gi|332009228|gb|AED96611.1|
           ATPase, V0 complex, subunit E [Arabidopsis thaliana]
          Length = 70

 Score =  120 bits (302), Expect = 2e-25
 Identities = 55/68 (80%), Positives = 63/68 (92%)
 Frame = -1

Query: 476 MGFLLTSLIFLVVGIVAALFMRICCNRGPSANLLHLTLVITAVVCCWLMWAIVYLAQMKP 297
           MGFL+T+LIF+VVGI+A+L +RICCNRGPS NLLHLTLVITA VCCW+MWAIVY+AQM P
Sbjct: 1   MGFLITTLIFVVVGIIASLCVRICCNRGPSTNLLHLTLVITATVCCWMMWAIVYIAQMNP 60

Query: 296 LINPILSE 273
           LI PILSE
Sbjct: 61  LIVPILSE 68


>ref|XP_003532155.1| PREDICTED: uncharacterized protein LOC100527598 [Glycine max]
          Length = 70

 Score =  120 bits (300), Expect = 3e-25
 Identities = 54/68 (79%), Positives = 62/68 (91%)
 Frame = -1

Query: 476 MGFLLTSLIFLVVGIVAALFMRICCNRGPSANLLHLTLVITAVVCCWLMWAIVYLAQMKP 297
           MGFL+T+LIF+V+GI+A L  RICCNRGPSANL HLTLVITA +CCW+MWAIVYLAQMKP
Sbjct: 1   MGFLVTTLIFVVIGIIACLCTRICCNRGPSANLFHLTLVITATICCWMMWAIVYLAQMKP 60

Query: 296 LINPILSE 273
           LI PIL+E
Sbjct: 61  LIVPILNE 68


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