BLASTX nr result

ID: Coptis21_contig00006205 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00006205
         (1605 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002284269.1| PREDICTED: dehydration-responsive protein RD...   330   6e-88
gb|AAV36561.1| RD22-like protein [Vitis vinifera]                     330   6e-88
ref|XP_002308621.1| predicted protein [Populus trichocarpa] gi|2...   324   5e-86
ref|XP_002284286.1| PREDICTED: dehydration-responsive protein RD...   322   1e-85
ref|XP_003522684.1| PREDICTED: dehydration-responsive protein RD...   321   3e-85

>ref|XP_002284269.1| PREDICTED: dehydration-responsive protein RD22 [Vitis vinifera]
          Length = 364

 Score =  330 bits (846), Expect = 6e-88
 Identities = 162/247 (65%), Positives = 189/247 (76%), Gaps = 6/247 (2%)
 Frame = +1

Query: 697  HRGKPVVVRAGD------FDYLYAASEDQLHADPNAALFFLEKDLKCGTKMNLHFTRTTN 858
            H+GK V V  G       FDY YAA+EDQLH DPN ALFF EK+++ GTKM LHF R  N
Sbjct: 116  HKGKHVYVGVGKGKSKSPFDYKYAATEDQLHDDPNVALFFFEKNMQPGTKMELHFIRDAN 175

Query: 859  GARFLPRKVAEASPLSSNKFAEVLKQFSVEPQSMEAEAMKQTVKXXXXXXXXXXXKSCAT 1038
             A FLPR+VA + P SS KF E+L +FS++P+S EAE +K T++           K CAT
Sbjct: 176  LATFLPRQVANSIPFSSKKFPEILNEFSIKPESEEAETIKNTIRECEEPGIKGEEKYCAT 235

Query: 1039 SLESMVDFSTSKLGKHVQPMSTEIDKQETPKQKYIIAPGVKKMGGENSVVCHKQIYAYAV 1218
            SLESMVDFSTSKLGK VQ +STE++K ETP+Q+Y I  GVKK+ G+ +VVCHKQ Y YAV
Sbjct: 236  SLESMVDFSTSKLGKGVQVISTEVEK-ETPEQQYTITTGVKKLAGDKAVVCHKQSYPYAV 294

Query: 1219 FYCHKTKSTEAYKVPLVGADGTKATAVAVCHTDTSKWNPKHLAFQVLKVKPGTVPICHFL 1398
            FYCHKT++T AY VPLVGADG+K  AVAVCHTDTS WNPKHLAFQVLKVKPGTVPICHFL
Sbjct: 295  FYCHKTQTTRAYMVPLVGADGSKVKAVAVCHTDTSAWNPKHLAFQVLKVKPGTVPICHFL 354

Query: 1399 PEDHIVW 1419
            PEDH+VW
Sbjct: 355  PEDHVVW 361



 Score = 60.5 bits (145), Expect = 1e-06
 Identities = 26/43 (60%), Positives = 32/43 (74%)
 Frame = +3

Query: 171 LLPIFAILLIAVVVSHAALPSEVYWDKVLPNTPMPKAVXXXXR 299
           LLPI A++ + V   HAALP+EVYW+ VLPNTPMPKA+    R
Sbjct: 5   LLPILALISLVVAAGHAALPTEVYWNSVLPNTPMPKAIRDILR 47


>gb|AAV36561.1| RD22-like protein [Vitis vinifera]
          Length = 364

 Score =  330 bits (846), Expect = 6e-88
 Identities = 162/247 (65%), Positives = 189/247 (76%), Gaps = 6/247 (2%)
 Frame = +1

Query: 697  HRGKPVVVRAGD------FDYLYAASEDQLHADPNAALFFLEKDLKCGTKMNLHFTRTTN 858
            H+GK V V  G       FDY YAA+EDQLH DPN ALFF EK+++ GTKM LHF R  N
Sbjct: 116  HKGKHVYVGVGKGKSKSPFDYKYAATEDQLHDDPNVALFFFEKNMQPGTKMELHFIRDAN 175

Query: 859  GARFLPRKVAEASPLSSNKFAEVLKQFSVEPQSMEAEAMKQTVKXXXXXXXXXXXKSCAT 1038
             A FLPR+VA + P SS KF E+L +FS++P+S EAE +K T++           K CAT
Sbjct: 176  LATFLPRQVANSIPFSSKKFPEILNEFSIKPESEEAETIKNTIRECEEPGIKGEEKYCAT 235

Query: 1039 SLESMVDFSTSKLGKHVQPMSTEIDKQETPKQKYIIAPGVKKMGGENSVVCHKQIYAYAV 1218
            SLESMVDFSTSKLGK VQ +STE++K ETP+Q+Y I  GVKK+ G+ +VVCHKQ Y YAV
Sbjct: 236  SLESMVDFSTSKLGKGVQMISTEVEK-ETPEQQYTITTGVKKLAGDKAVVCHKQSYPYAV 294

Query: 1219 FYCHKTKSTEAYKVPLVGADGTKATAVAVCHTDTSKWNPKHLAFQVLKVKPGTVPICHFL 1398
            FYCHKT++T AY VPLVGADG+K  AVAVCHTDTS WNPKHLAFQVLKVKPGTVPICHFL
Sbjct: 295  FYCHKTQTTRAYMVPLVGADGSKVKAVAVCHTDTSAWNPKHLAFQVLKVKPGTVPICHFL 354

Query: 1399 PEDHIVW 1419
            PEDH+VW
Sbjct: 355  PEDHVVW 361



 Score = 58.9 bits (141), Expect = 4e-06
 Identities = 25/43 (58%), Positives = 32/43 (74%)
 Frame = +3

Query: 171 LLPIFAILLIAVVVSHAALPSEVYWDKVLPNTPMPKAVXXXXR 299
           LLPI A++ + V   HAALP++VYW+ VLPNTPMPKA+    R
Sbjct: 5   LLPILALISLVVAAGHAALPTKVYWNSVLPNTPMPKAIRDILR 47


>ref|XP_002308621.1| predicted protein [Populus trichocarpa] gi|222854597|gb|EEE92144.1|
            predicted protein [Populus trichocarpa]
          Length = 401

 Score =  324 bits (830), Expect = 5e-86
 Identities = 160/248 (64%), Positives = 186/248 (75%), Gaps = 4/248 (1%)
 Frame = +1

Query: 697  HRGKPVVVRA----GDFDYLYAASEDQLHADPNAALFFLEKDLKCGTKMNLHFTRTTNGA 864
            H GKPV+V      G F+Y+YAA+E QLH DPN ALFFLEKD+  G  MNL FT  TN A
Sbjct: 155  HHGKPVIVGVRPGPGPFNYIYAATETQLHDDPNVALFFLEKDMHPGKIMNLQFTENTNTA 214

Query: 865  RFLPRKVAEASPLSSNKFAEVLKQFSVEPQSMEAEAMKQTVKXXXXXXXXXXXKSCATSL 1044
             FLPR+VA++ P SS+K  E+  +FSV+P SMEA  M+ T+K           K CATSL
Sbjct: 215  TFLPRQVADSIPFSSDKLPEIYSEFSVKPGSMEAAEMENTIKECESPGIKGEEKYCATSL 274

Query: 1045 ESMVDFSTSKLGKHVQPMSTEIDKQETPKQKYIIAPGVKKMGGENSVVCHKQIYAYAVFY 1224
            ESM+DFSTSKLGK+VQ +STE+D Q T  QKY I  GVKK+ G+ SVVCHKQ YAY+VFY
Sbjct: 275  ESMIDFSTSKLGKNVQAISTEVDNQ-TKMQKYTIKTGVKKVAGDKSVVCHKQNYAYSVFY 333

Query: 1225 CHKTKSTEAYKVPLVGADGTKATAVAVCHTDTSKWNPKHLAFQVLKVKPGTVPICHFLPE 1404
            CH T++T AY VPL G DGTKA AVAVCHTDTS WNPKHLAFQVL VKPGTVP+CHFLP+
Sbjct: 334  CHATQTTRAYTVPLEGDDGTKAKAVAVCHTDTSAWNPKHLAFQVLNVKPGTVPVCHFLPQ 393

Query: 1405 DHIVWTSN 1428
            DH+VW SN
Sbjct: 394  DHVVWFSN 401



 Score = 56.2 bits (134), Expect(2) = 2e-14
 Identities = 26/38 (68%), Positives = 30/38 (78%)
 Frame = +3

Query: 171 LLPIFAILLIAVVVSHAALPSEVYWDKVLPNTPMPKAV 284
           L  I A L  A+VVSHAALP E+YW+ VLPNTPMPK+V
Sbjct: 5   LTRILAFLSFALVVSHAALPPELYWNSVLPNTPMPKSV 42



 Score = 50.8 bits (120), Expect(2) = 2e-14
 Identities = 24/36 (66%), Positives = 29/36 (80%)
 Frame = +1

Query: 334 TPMPKAVRELLRPDPEEEKSTSVNVGKAGVAIDSTK 441
           TPMPK+VR+LL PD  E+KSTSV VGK GV +D+ K
Sbjct: 36  TPMPKSVRDLLHPDLVEDKSTSVAVGKGGVNVDAGK 71


>ref|XP_002284286.1| PREDICTED: dehydration-responsive protein RD22 [Vitis vinifera]
            gi|227464475|gb|ACP40551.1| rd22-c [Vitis vinifera]
          Length = 337

 Score =  322 bits (826), Expect = 1e-85
 Identities = 161/245 (65%), Positives = 186/245 (75%), Gaps = 4/245 (1%)
 Frame = +1

Query: 697  HRGKPVVVRA----GDFDYLYAASEDQLHADPNAALFFLEKDLKCGTKMNLHFTRTTNGA 864
            H+GKPV V        F Y YAA+EDQLHADP+ ALFF+EKD++ GTKMNLHF + T  A
Sbjct: 92   HKGKPVYVGVTPGPSPFTYKYAATEDQLHADPSVALFFMEKDMRPGTKMNLHFIKNTKEA 151

Query: 865  RFLPRKVAEASPLSSNKFAEVLKQFSVEPQSMEAEAMKQTVKXXXXXXXXXXXKSCATSL 1044
             FLP+        SS K  E+LK FSV+P+S+EA+ +K T+K           K CATSL
Sbjct: 152  TFLPQS-EHPIIFSSEKLPEILKHFSVKPESVEAQIIKNTIKECEAPGTKGEEKYCATSL 210

Query: 1045 ESMVDFSTSKLGKHVQPMSTEIDKQETPKQKYIIAPGVKKMGGENSVVCHKQIYAYAVFY 1224
            ESM+DFS SKLGK VQ +STE+ K ET KQKY IA GVKKM G+ SVVCHKQ Y YAVFY
Sbjct: 211  ESMIDFSISKLGKRVQAISTEVVK-ETQKQKYTIAAGVKKMAGDESVVCHKQNYPYAVFY 269

Query: 1225 CHKTKSTEAYKVPLVGADGTKATAVAVCHTDTSKWNPKHLAFQVLKVKPGTVPICHFLPE 1404
            CHKT++T AY VPLVGADGT+A AVAVCHTDTS+WNPKHLAFQVLKVKPGT+PICHFLPE
Sbjct: 270  CHKTQTTRAYMVPLVGADGTRAKAVAVCHTDTSEWNPKHLAFQVLKVKPGTIPICHFLPE 329

Query: 1405 DHIVW 1419
            DHI+W
Sbjct: 330  DHIIW 334


>ref|XP_003522684.1| PREDICTED: dehydration-responsive protein RD22-like [Glycine max]
          Length = 341

 Score =  321 bits (823), Expect = 3e-85
 Identities = 158/245 (64%), Positives = 188/245 (76%), Gaps = 4/245 (1%)
 Frame = +1

Query: 697  HRGKPVVVRAGD---FDYLYAASEDQLHADPNAALFFLEKDLKCGTKMNLHFTRTT-NGA 864
            H+GKPV V  G    FDY+YAA+E QLH DPN ALFFLEKDL  GTK++LHFTR+T N A
Sbjct: 95   HKGKPVHVSVGSKSPFDYVYAATETQLHDDPNVALFFLEKDLHSGTKLDLHFTRSTSNQA 154

Query: 865  RFLPRKVAEASPLSSNKFAEVLKQFSVEPQSMEAEAMKQTVKXXXXXXXXXXXKSCATSL 1044
             FL R+VA++ P SSNK   +  +FSV+P S EA+ MK T+            K CATSL
Sbjct: 155  TFLSRQVADSIPFSSNKVDFIFNKFSVKPGSEEAQIMKNTISECEEGGIKGEEKYCATSL 214

Query: 1045 ESMVDFSTSKLGKHVQPMSTEIDKQETPKQKYIIAPGVKKMGGENSVVCHKQIYAYAVFY 1224
            ESMVDFSTSKLG +V+ +STE+DK ET  QKY +APGVKK+ G+ +VVCHKQ Y YAVFY
Sbjct: 215  ESMVDFSTSKLGNNVEVVSTEVDK-ETGLQKYTVAPGVKKLSGDKAVVCHKQNYPYAVFY 273

Query: 1225 CHKTKSTEAYKVPLVGADGTKATAVAVCHTDTSKWNPKHLAFQVLKVKPGTVPICHFLPE 1404
            CHKT++T AY VPL G +G +  AVAVCHTDTS+WNPKHLAFQVLKVKPGT+P+CHFLPE
Sbjct: 274  CHKTETTRAYSVPLEGTNGVRVKAVAVCHTDTSEWNPKHLAFQVLKVKPGTIPVCHFLPE 333

Query: 1405 DHIVW 1419
            DH+VW
Sbjct: 334  DHVVW 338



 Score = 60.5 bits (145), Expect(2) = 1e-13
 Identities = 27/38 (71%), Positives = 31/38 (81%)
 Frame = +3

Query: 171 LLPIFAILLIAVVVSHAALPSEVYWDKVLPNTPMPKAV 284
           LLPIF +L IA+V +HAALP EVYW  VLP TPMPKA+
Sbjct: 5   LLPIFTLLNIALVATHAALPPEVYWKSVLPTTPMPKAI 42



 Score = 43.5 bits (101), Expect(2) = 1e-13
 Identities = 22/42 (52%), Positives = 29/42 (69%)
 Frame = +1

Query: 334 TPMPKAVRELLRPDPEEEKSTSVNVGKAGVAIDSTKPGKSDT 459
           TPMPKA+ ++L  D  EEKS+SV+VG  GV + + K G S T
Sbjct: 36  TPMPKAITDILYSDWVEEKSSSVHVGGGGVNVHTGKGGGSGT 77


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