BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00006178
         (2143 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003578758.1| PREDICTED: uncharacterized protein LOC100826...   119   4e-24
ref|NP_001067091.1| Os12g0572400 [Oryza sativa Japonica Group] g...   115   4e-23
gb|EEC69539.1| hypothetical protein OsI_38819 [Oryza sativa Indi...   115   4e-23
dbj|BAC78592.1| pre-mRNA splicing factor [Oryza sativa Japonica ...   115   4e-23
ref|NP_001046448.1| Os02g0252100 [Oryza sativa Japonica Group] g...   114   1e-22

>ref|XP_003578758.1| PREDICTED: uncharacterized protein LOC100826288 [Brachypodium
            distachyon]
          Length = 295

 Score =  119 bits (297), Expect = 4e-24
 Identities = 71/166 (42%), Positives = 87/166 (52%)
 Frame = +2

Query: 1271 EPRGFAFVQFVDGYDAAEAQYHMNRQLFGGREITVVLAAETRKRPEEMRSRAXXXXXXXX 1450
            EPRGFAFV+FVD YDA+EAQYHMNRQ+F GREITVVLAAE+RKRPE+MRSR         
Sbjct: 104  EPRGFAFVEFVDPYDASEAQYHMNRQVFFGREITVVLAAESRKRPEDMRSRTRIRGYSGG 163

Query: 1451 XXXXXXXXXXXXXXXXXXXXXXXXYTXXXXXXXXXXXXXXXXXQRDDYSVSPRGRAMDHS 1630
                                                       +RDDYS SPRGR    +
Sbjct: 164  QEGRRSSHYGRSRSRSRSLS-----PRPRGGRPRSRSYSPAPRRRDDYSASPRGRESHRT 218

Query: 1631 RSPRDHLQERESGHVRRRSFSPGYDSADNHEADNGHAKKPVYDDTE 1768
            +SP  H +E E G  +RRS+SP     D  +ADN + K+    D++
Sbjct: 219  KSPIRHPKENEEG--KRRSYSPAGRDGDQRDADNDYEKRSPPPDSD 262


>ref|NP_001067091.1| Os12g0572400 [Oryza sativa Japonica Group] gi|77556878|gb|ABA99674.1|
            RNA recognition motif family protein, expressed [Oryza
            sativa Japonica Group] gi|113649598|dbj|BAF30110.1|
            Os12g0572400 [Oryza sativa Japonica Group]
            gi|215694562|dbj|BAG89555.1| unnamed protein product
            [Oryza sativa Japonica Group] gi|222617335|gb|EEE53467.1|
            hypothetical protein OsJ_36595 [Oryza sativa Japonica
            Group]
          Length = 263

 Score =  115 bits (289), Expect = 4e-23
 Identities = 75/197 (38%), Positives = 94/197 (47%)
 Frame = +2

Query: 1271 EPRGFAFVQFVDGYDAAEAQYHMNRQLFGGREITVVLAAETRKRPEEMRSRAXXXXXXXX 1450
            EPRGFAFV+FVD YDA+EAQYHMNRQ+F GREITVVLAAE+RKRPEEMRSRA        
Sbjct: 76   EPRGFAFVEFVDPYDASEAQYHMNRQVFFGREITVVLAAESRKRPEEMRSRARVRGYSGN 135

Query: 1451 XXXXXXXXXXXXXXXXXXXXXXXXYTXXXXXXXXXXXXXXXXXQRDDYSVSPRGRAMDHS 1630
                                     +                 +RDDYS SP  +    +
Sbjct: 136  EGRRSSYYGRSRSRSR---------SPHYRGRPRSRSYSPAPRRRDDYSASPPRKDTHPT 186

Query: 1631 RSPRDHLQERESGHVRRRSFSPGYDSADNHEADNGHAKKPVYDDTEEGRPEWXXXXXXXX 1810
            +SPR   +E +    +RRS+SP     D  +ADNG+ K+    D++   P          
Sbjct: 187  KSPRRQPKEHDE-EKKRRSYSPASRDGDPRDADNGYEKRSPPPDSDGSPPHRRSPRHSSG 245

Query: 1811 XXXXXXXXXXDLSPRRS 1861
                      D+SP RS
Sbjct: 246  SPPGSRSRSADVSPARS 262


>gb|EEC69539.1| hypothetical protein OsI_38819 [Oryza sativa Indica Group]
          Length = 263

 Score =  115 bits (289), Expect = 4e-23
 Identities = 75/197 (38%), Positives = 94/197 (47%)
 Frame = +2

Query: 1271 EPRGFAFVQFVDGYDAAEAQYHMNRQLFGGREITVVLAAETRKRPEEMRSRAXXXXXXXX 1450
            EPRGFAFV+FVD YDA+EAQYHMNRQ+F GREITVVLAAE+RKRPEEMRSRA        
Sbjct: 76   EPRGFAFVEFVDPYDASEAQYHMNRQVFFGREITVVLAAESRKRPEEMRSRARVRGYSGN 135

Query: 1451 XXXXXXXXXXXXXXXXXXXXXXXXYTXXXXXXXXXXXXXXXXXQRDDYSVSPRGRAMDHS 1630
                                     +                 +RDDYS SP  +    +
Sbjct: 136  EGRRSSYYGRSRSRSR---------SPRYRGRPRSRSYSPAPRRRDDYSASPPRKDTHPT 186

Query: 1631 RSPRDHLQERESGHVRRRSFSPGYDSADNHEADNGHAKKPVYDDTEEGRPEWXXXXXXXX 1810
            +SPR   +E +    +RRS+SP     D  +ADNG+ K+    D++   P          
Sbjct: 187  KSPRRQPKEHDE-EKKRRSYSPASRDGDPRDADNGYEKRSPPPDSDGSPPHRRSPRHSSG 245

Query: 1811 XXXXXXXXXXDLSPRRS 1861
                      D+SP RS
Sbjct: 246  SPPGSRSRSADVSPARS 262


>dbj|BAC78592.1| pre-mRNA splicing factor [Oryza sativa Japonica Group]
          Length = 232

 Score =  115 bits (289), Expect = 4e-23
 Identities = 75/197 (38%), Positives = 94/197 (47%)
 Frame = +2

Query: 1271 EPRGFAFVQFVDGYDAAEAQYHMNRQLFGGREITVVLAAETRKRPEEMRSRAXXXXXXXX 1450
            EPRGFAFV+FVD YDA+EAQYHMNRQ+F GREITVVLAAE+RKRPEEMRSRA        
Sbjct: 45   EPRGFAFVEFVDPYDASEAQYHMNRQVFFGREITVVLAAESRKRPEEMRSRARVRGYSGN 104

Query: 1451 XXXXXXXXXXXXXXXXXXXXXXXXYTXXXXXXXXXXXXXXXXXQRDDYSVSPRGRAMDHS 1630
                                     +                 +RDDYS SP  +    +
Sbjct: 105  EGRRSSYYGRSRSRSR---------SPHYRGRPRSRSYSPAPRRRDDYSASPPRKDTHPT 155

Query: 1631 RSPRDHLQERESGHVRRRSFSPGYDSADNHEADNGHAKKPVYDDTEEGRPEWXXXXXXXX 1810
            +SPR   +E +    +RRS+SP     D  +ADNG+ K+    D++   P          
Sbjct: 156  KSPRRQPKEHDE-EKKRRSYSPASRDGDPRDADNGYEKRSPPPDSDGSPPHRRSPRHSSG 214

Query: 1811 XXXXXXXXXXDLSPRRS 1861
                      D+SP RS
Sbjct: 215  SPPGSRSRSADVSPARS 231


>ref|NP_001046448.1| Os02g0252100 [Oryza sativa Japonica Group]
            gi|47497118|dbj|BAD19168.1| putative pre-mRNA splicing
            factor [Oryza sativa Japonica Group]
            gi|47497696|dbj|BAD19762.1| putative pre-mRNA splicing
            factor [Oryza sativa Japonica Group]
            gi|66394215|gb|AAG43284.2| pre-mRNA splicing factor
            [Oryza sativa] gi|113535979|dbj|BAF08362.1| Os02g0252100
            [Oryza sativa Japonica Group]
            gi|215704460|dbj|BAG93894.1| unnamed protein product
            [Oryza sativa Japonica Group]
          Length = 265

 Score =  114 bits (285), Expect = 1e-22
 Identities = 70/170 (41%), Positives = 88/170 (51%)
 Frame = +2

Query: 1271 EPRGFAFVQFVDGYDAAEAQYHMNRQLFGGREITVVLAAETRKRPEEMRSRAXXXXXXXX 1450
            EPRGFAFV+FVD YDA+EAQYHMNRQ+  GREITVVLAAE+RKRPEEMRSRA        
Sbjct: 76   EPRGFAFVEFVDPYDASEAQYHMNRQVVFGREITVVLAAESRKRPEEMRSRARVRGYSDH 135

Query: 1451 XXXXXXXXXXXXXXXXXXXXXXXXYTXXXXXXXXXXXXXXXXXQRDDYSVSPRGRAMDHS 1630
                                     +                 +RDDYS SP+ +    +
Sbjct: 136  EGRRSSHYGRSRSRSRSR-------SPRYRGRPRSRSYSPAPRRRDDYSASPQRKDTHRA 188

Query: 1631 RSPRDHLQERESGHVRRRSFSPGYDSADNHEADNGHAKKPVYDDTEEGRP 1780
            +SPR   +E E    +RRS+SP     D  +ADNG+ K+    D++   P
Sbjct: 189  KSPRRQPKEHEVDK-KRRSYSPANKDGDRRDADNGYEKRSPPADSDGSPP 237