BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00006171
         (340 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI19757.3| unnamed protein product [Vitis vinifera]              106   8e-24
ref|XP_002281042.1| PREDICTED: GTPase HflX-like [Vitis vinifera]      106   8e-24
ref|XP_003575913.1| PREDICTED: GTPase HflX-like [Brachypodium di...   103   3e-23
gb|EEE52387.1| hypothetical protein OsJ_34479 [Oryza sativa Japo...   103   4e-23
gb|ABA94562.1| small GTP-binding protein domain containing prote...   103   4e-23

>emb|CBI19757.3| unnamed protein product [Vitis vinifera]
          Length = 561

 Score =  106 bits (265), Expect(2) = 8e-24
 Identities = 65/93 (69%), Positives = 68/93 (73%), Gaps = 1/93 (1%)
 Frame = -1

Query: 337 SVPIPVVSLVGYTNAGKSTLLNRLTGANVLAED*LFATLDPATXXXXXXXXXXRNIF*LT 158
           SVP+PVVSLVGYTNAGKSTLLNRLTG+NVLAED LFATLDP T             F LT
Sbjct: 334 SVPVPVVSLVGYTNAGKSTLLNRLTGSNVLAEDRLFATLDPTTRRVQMKNGRE---FLLT 390

Query: 157 LLVS-SKSYPLHLVAAFRATLEEISESSLLVHV 62
             V   +  P  LVAAFRATLEEISESSLLVHV
Sbjct: 391 DTVGFIQKLPTMLVAAFRATLEEISESSLLVHV 423



 Score = 28.5 bits (62), Expect(2) = 8e-24
 Identities = 13/18 (72%), Positives = 15/18 (83%)
 Frame = -2

Query: 54  VHFSHILSQQQIDAVDKV 1
           V  SH L++QQIDAVDKV
Sbjct: 424 VDISHPLAEQQIDAVDKV 441


>ref|XP_002281042.1| PREDICTED: GTPase HflX-like [Vitis vinifera]
          Length = 547

 Score =  106 bits (265), Expect(2) = 8e-24
 Identities = 65/93 (69%), Positives = 68/93 (73%), Gaps = 1/93 (1%)
 Frame = -1

Query: 337 SVPIPVVSLVGYTNAGKSTLLNRLTGANVLAED*LFATLDPATXXXXXXXXXXRNIF*LT 158
           SVP+PVVSLVGYTNAGKSTLLNRLTG+NVLAED LFATLDP T             F LT
Sbjct: 320 SVPVPVVSLVGYTNAGKSTLLNRLTGSNVLAEDRLFATLDPTTRRVQMKNGRE---FLLT 376

Query: 157 LLVS-SKSYPLHLVAAFRATLEEISESSLLVHV 62
             V   +  P  LVAAFRATLEEISESSLLVHV
Sbjct: 377 DTVGFIQKLPTMLVAAFRATLEEISESSLLVHV 409



 Score = 28.5 bits (62), Expect(2) = 8e-24
 Identities = 13/18 (72%), Positives = 15/18 (83%)
 Frame = -2

Query: 54  VHFSHILSQQQIDAVDKV 1
           V  SH L++QQIDAVDKV
Sbjct: 410 VDISHPLAEQQIDAVDKV 427


>ref|XP_003575913.1| PREDICTED: GTPase HflX-like [Brachypodium distachyon]
          Length = 535

 Score =  103 bits (257), Expect(2) = 3e-23
 Identities = 63/93 (67%), Positives = 68/93 (73%), Gaps = 1/93 (1%)
 Frame = -1

Query: 337 SVPIPVVSLVGYTNAGKSTLLNRLTGANVLAED*LFATLDPATXXXXXXXXXXRNIF*LT 158
           SVPIPVVSLVGYTNAGKSTLLNRLTGA+VLAED LFATLDP T             F LT
Sbjct: 332 SVPIPVVSLVGYTNAGKSTLLNRLTGADVLAEDKLFATLDPTTRRVLMKSGTE---FLLT 388

Query: 157 LLVS-SKSYPLHLVAAFRATLEEISESSLLVHV 62
             V   +  P  LVAAFRATLEEISESS++VH+
Sbjct: 389 DTVGFIQKLPTMLVAAFRATLEEISESSIIVHL 421



 Score = 29.6 bits (65), Expect(2) = 3e-23
 Identities = 14/18 (77%), Positives = 15/18 (83%)
 Frame = -2

Query: 54  VHFSHILSQQQIDAVDKV 1
           V  SH L+QQQIDAVDKV
Sbjct: 422 VDISHPLAQQQIDAVDKV 439


>gb|EEE52387.1| hypothetical protein OsJ_34479 [Oryza sativa Japonica Group]
          Length = 568

 Score =  103 bits (256), Expect(2) = 4e-23
 Identities = 63/93 (67%), Positives = 68/93 (73%), Gaps = 1/93 (1%)
 Frame = -1

Query: 337 SVPIPVVSLVGYTNAGKSTLLNRLTGANVLAED*LFATLDPATXXXXXXXXXXRNIF*LT 158
           SVPIPVVSLVGYTNAGKSTLLNRLTGA+VLAED LFATLDP T             F LT
Sbjct: 340 SVPIPVVSLVGYTNAGKSTLLNRLTGADVLAEDKLFATLDPTTRRVLMKNGTE---FLLT 396

Query: 157 LLVS-SKSYPLHLVAAFRATLEEISESSLLVHV 62
             V   +  P  LVAAFRATLEEISESS++VH+
Sbjct: 397 DTVGFIQKLPTMLVAAFRATLEEISESSVIVHL 429



 Score = 29.6 bits (65), Expect(2) = 4e-23
 Identities = 14/18 (77%), Positives = 15/18 (83%)
 Frame = -2

Query: 54  VHFSHILSQQQIDAVDKV 1
           V  SH L+QQQIDAVDKV
Sbjct: 430 VDISHPLAQQQIDAVDKV 447


>gb|ABA94562.1| small GTP-binding protein domain containing protein, expressed
           [Oryza sativa Japonica Group]
           gi|218194387|gb|EEC76814.1| hypothetical protein
           OsI_14944 [Oryza sativa Indica Group]
          Length = 552

 Score =  103 bits (256), Expect(2) = 4e-23
 Identities = 63/93 (67%), Positives = 68/93 (73%), Gaps = 1/93 (1%)
 Frame = -1

Query: 337 SVPIPVVSLVGYTNAGKSTLLNRLTGANVLAED*LFATLDPATXXXXXXXXXXRNIF*LT 158
           SVPIPVVSLVGYTNAGKSTLLNRLTGA+VLAED LFATLDP T             F LT
Sbjct: 324 SVPIPVVSLVGYTNAGKSTLLNRLTGADVLAEDKLFATLDPTTRRVLMKNGTE---FLLT 380

Query: 157 LLVS-SKSYPLHLVAAFRATLEEISESSLLVHV 62
             V   +  P  LVAAFRATLEEISESS++VH+
Sbjct: 381 DTVGFIQKLPTMLVAAFRATLEEISESSVIVHL 413



 Score = 29.6 bits (65), Expect(2) = 4e-23
 Identities = 14/18 (77%), Positives = 15/18 (83%)
 Frame = -2

Query: 54  VHFSHILSQQQIDAVDKV 1
           V  SH L+QQQIDAVDKV
Sbjct: 414 VDISHPLAQQQIDAVDKV 431