BLASTX nr result

ID: Coptis21_contig00006127 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00006127
         (251 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI20154.3| unnamed protein product [Vitis vinifera]              100   9e-20
emb|CAN81779.1| hypothetical protein VITISV_034284 [Vitis vinifera]   100   9e-20
ref|XP_004146083.1| PREDICTED: probable LRR receptor-like serine...    97   1e-18
ref|XP_003596262.1| Receptor-like serine/threonine kinase [Medic...    96   2e-18
ref|XP_002283497.2| PREDICTED: probable LRR receptor-like serine...    92   4e-17

>emb|CBI20154.3| unnamed protein product [Vitis vinifera]
          Length = 1181

 Score =  100 bits (250), Expect = 9e-20
 Identities = 48/69 (69%), Positives = 55/69 (79%)
 Frame = -1

Query: 251 VGKSFVTEHNANVTGSTLEIHLYWAGKGTIAVPRGDIYGPLISAISVTPNFDPSTGLSAG 72
           VGK+   +   +V GSTLEIHLYWAGKGT A+P   +YGPLISAI+VTPNFD STGLSAG
Sbjct: 708 VGKAITKDFETSVNGSTLEIHLYWAGKGTNAIPSRGVYGPLISAITVTPNFDVSTGLSAG 767

Query: 71  TIAGIVVGS 45
            IAGIV+ S
Sbjct: 768 AIAGIVIAS 776


>emb|CAN81779.1| hypothetical protein VITISV_034284 [Vitis vinifera]
          Length = 970

 Score =  100 bits (250), Expect = 9e-20
 Identities = 48/69 (69%), Positives = 55/69 (79%)
 Frame = -1

Query: 251 VGKSFVTEHNANVTGSTLEIHLYWAGKGTIAVPRGDIYGPLISAISVTPNFDPSTGLSAG 72
           VGK+   +   +V GSTLEIHLYWAGKGT A+P   +YGPLISAI+VTPNFD STGLSAG
Sbjct: 497 VGKAITKDFETSVNGSTLEIHLYWAGKGTNAIPSRGVYGPLISAITVTPNFDVSTGLSAG 556

Query: 71  TIAGIVVGS 45
            IAGIV+ S
Sbjct: 557 AIAGIVIAS 565


>ref|XP_004146083.1| PREDICTED: probable LRR receptor-like serine/threonine-protein
           kinase At1g53440-like [Cucumis sativus]
           gi|449521066|ref|XP_004167552.1| PREDICTED: probable LRR
           receptor-like serine/threonine-protein kinase
           At1g53440-like [Cucumis sativus]
          Length = 1012

 Score = 97.1 bits (240), Expect = 1e-18
 Identities = 51/72 (70%), Positives = 56/72 (77%), Gaps = 2/72 (2%)
 Frame = -1

Query: 251 VGKSFVTEH-NANVTGSTLEIHLYWAGKGTIAVPRGDIYGPLISAISVTPNFDPSTG-LS 78
           VGK+F+ E  N  V GSTLEIHLYWAGKGT A+P   +YGPLIS I+VTPNFD   G LS
Sbjct: 543 VGKTFILEESNILVNGSTLEIHLYWAGKGTTAIPDRGVYGPLISGITVTPNFDVEPGTLS 602

Query: 77  AGTIAGIVVGSF 42
           AG IAGIVVGSF
Sbjct: 603 AGAIAGIVVGSF 614


>ref|XP_003596262.1| Receptor-like serine/threonine kinase [Medicago truncatula]
           gi|355485310|gb|AES66513.1| Receptor-like
           serine/threonine kinase [Medicago truncatula]
          Length = 1011

 Score = 96.3 bits (238), Expect = 2e-18
 Identities = 50/84 (59%), Positives = 57/84 (67%), Gaps = 1/84 (1%)
 Frame = -1

Query: 251 VGKSFVTEHNANVTGSTLEIHLYWAGKGTIAVPRGDIYGPLISAISVTPNFD-PSTGLSA 75
           VGK    + N +V  STLEIHL WAGKGT A+P   +YGPLISAI+VTPNF  PS GLSA
Sbjct: 550 VGKGITRDFNVDVNDSTLEIHLSWAGKGTNAIPMRGVYGPLISAITVTPNFKIPSNGLSA 609

Query: 74  GTIAGIVVGSFXXXXXXXXXLWKL 3
           G IAGIV+GS          LWK+
Sbjct: 610 GAIAGIVIGSLAFVMLILFVLWKM 633


>ref|XP_002283497.2| PREDICTED: probable LRR receptor-like serine/threonine-protein
           kinase At1g53440-like [Vitis vinifera]
          Length = 1019

 Score = 92.0 bits (227), Expect = 4e-17
 Identities = 42/68 (61%), Positives = 51/68 (75%)
 Frame = -1

Query: 248 GKSFVTEHNANVTGSTLEIHLYWAGKGTIAVPRGDIYGPLISAISVTPNFDPSTGLSAGT 69
           G     + +A+V GSTLEIHLYW GKGT ++P   +YGPLISAI+VTPNFDP+ GLS G 
Sbjct: 544 GNGIYRDFDASVNGSTLEIHLYWTGKGTNSIPEKGVYGPLISAIAVTPNFDPNPGLSVGG 603

Query: 68  IAGIVVGS 45
           I GIV+ S
Sbjct: 604 IIGIVIAS 611


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