BLASTX nr result

ID: Coptis21_contig00006126 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00006126
         (320 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABK92751.1| unknown [Populus trichocarpa]                          124   6e-27
ref|XP_002527636.1| conserved hypothetical protein [Ricinus comm...   123   2e-26
ref|XP_003524459.1| PREDICTED: uncharacterized protein LOC547883...   122   4e-26
gb|AFK40219.1| unknown [Lotus japonicus]                              120   9e-26
ref|XP_003611447.1| GMFP4 [Medicago truncatula] gi|355512782|gb|...   120   2e-25

>gb|ABK92751.1| unknown [Populus trichocarpa]
          Length = 280

 Score =  124 bits (312), Expect = 6e-27
 Identities = 62/104 (59%), Positives = 69/104 (66%)
 Frame = -1

Query: 317 DGHQFLQLGRPMLLLVSLSSTILDKLPKAWFIYLFIGIGVILVFISLFGCIGALTRXXXX 138
           DG    QLGRPML+ +SLS  ILDKLPKAWFIYLF+ +GVIL  IS FGCIGA TR    
Sbjct: 51  DGQGLTQLGRPMLMTMSLSDNILDKLPKAWFIYLFVAVGVILFIISCFGCIGAATRNGCC 110

Query: 137 XXXXXXXXXXXXXXXXXXXAFIFFDKSWKDEIPTDKTGDFEMIY 6
                              AFIFFDKSWK+EIPTDKTGDF+M+Y
Sbjct: 111 LTCYSVLIVLLILVELGCAAFIFFDKSWKEEIPTDKTGDFDMLY 154


>ref|XP_002527636.1| conserved hypothetical protein [Ricinus communis]
           gi|223532941|gb|EEF34707.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 280

 Score =  123 bits (308), Expect = 2e-26
 Identities = 60/99 (60%), Positives = 71/99 (71%)
 Frame = -1

Query: 302 LQLGRPMLLLVSLSSTILDKLPKAWFIYLFIGIGVILVFISLFGCIGALTRXXXXXXXXX 123
           +QLGRPML+ VSLS +++DKLPKAWFIYLFIG+G+IL  IS FGCIG++TR         
Sbjct: 56  IQLGRPMLMAVSLSDSLVDKLPKAWFIYLFIGVGLILFVISCFGCIGSVTRNGCCLSCYS 115

Query: 122 XXXXXXXXXXXXXXAFIFFDKSWKDEIPTDKTGDFEMIY 6
                         AFIFFDKSWK+EIPTDKTGDF+MIY
Sbjct: 116 VLVILLILIELGCAAFIFFDKSWKEEIPTDKTGDFDMIY 154


>ref|XP_003524459.1| PREDICTED: uncharacterized protein LOC547883 [Glycine max]
          Length = 277

 Score =  122 bits (305), Expect = 4e-26
 Identities = 62/104 (59%), Positives = 69/104 (66%)
 Frame = -1

Query: 317 DGHQFLQLGRPMLLLVSLSSTILDKLPKAWFIYLFIGIGVILVFISLFGCIGALTRXXXX 138
           D    +QLGRPML+ VSLS++ LD LPKAWFIYLFIGIG +L  IS FGCI ALTR    
Sbjct: 48  DDQTLVQLGRPMLVAVSLSNSFLDDLPKAWFIYLFIGIGAVLFVISCFGCIAALTRNGCC 107

Query: 137 XXXXXXXXXXXXXXXXXXXAFIFFDKSWKDEIPTDKTGDFEMIY 6
                              AFIFFDKSWK+EIPTDKTGDF+MIY
Sbjct: 108 LSFYSVLVLLLILVELGCAAFIFFDKSWKEEIPTDKTGDFDMIY 151


>gb|AFK40219.1| unknown [Lotus japonicus]
          Length = 282

 Score =  120 bits (302), Expect = 9e-26
 Identities = 61/104 (58%), Positives = 69/104 (66%)
 Frame = -1

Query: 317 DGHQFLQLGRPMLLLVSLSSTILDKLPKAWFIYLFIGIGVILVFISLFGCIGALTRXXXX 138
           D    +QLGRPML+ VSLS++  D LPKAWFIYLFIGIGV+L  IS FGCIGA+TR    
Sbjct: 53  DDQTLVQLGRPMLMAVSLSNSFFDDLPKAWFIYLFIGIGVVLFVISCFGCIGAMTRSGCC 112

Query: 137 XXXXXXXXXXXXXXXXXXXAFIFFDKSWKDEIPTDKTGDFEMIY 6
                              AFIFFDKSWK EIPTDKTG+F+MIY
Sbjct: 113 LSCFAVLVVLLILAELGCAAFIFFDKSWKKEIPTDKTGNFDMIY 156


>ref|XP_003611447.1| GMFP4 [Medicago truncatula] gi|355512782|gb|AES94405.1| GMFP4
           [Medicago truncatula]
          Length = 289

 Score =  120 bits (300), Expect = 2e-25
 Identities = 58/99 (58%), Positives = 66/99 (66%)
 Frame = -1

Query: 302 LQLGRPMLLLVSLSSTILDKLPKAWFIYLFIGIGVILVFISLFGCIGALTRXXXXXXXXX 123
           +Q GRPML+ VSLS  I DKLPKAWFIYLFIG+G +L  +S FGCIGA TR         
Sbjct: 64  IQFGRPMLMAVSLSDNIFDKLPKAWFIYLFIGVGAVLFVVSCFGCIGATTRNGCCLICYS 123

Query: 122 XXXXXXXXXXXXXXAFIFFDKSWKDEIPTDKTGDFEMIY 6
                         AF+FFDKSWK+EIPTDKTGDF+MIY
Sbjct: 124 ILVALLILVELGCAAFLFFDKSWKEEIPTDKTGDFDMIY 162


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