BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00006120
         (514 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002274670.1| PREDICTED: pentatricopeptide repeat-containi...   101   6e-20
ref|XP_004158532.1| PREDICTED: pentatricopeptide repeat-containi...    88   6e-16
emb|CBI21323.3| unnamed protein product [Vitis vinifera]               88   6e-16
ref|XP_003549091.1| PREDICTED: pentatricopeptide repeat-containi...    79   4e-13
ref|XP_004138797.1| PREDICTED: pentatricopeptide repeat-containi...    78   9e-13

>ref|XP_002274670.1| PREDICTED: pentatricopeptide repeat-containing protein At5g14080
           [Vitis vinifera]
          Length = 660

 Score =  101 bits (252), Expect = 6e-20
 Identities = 49/123 (39%), Positives = 78/123 (63%)
 Frame = +3

Query: 3   ILTALVHSLCKEGNSLAASRLIRGLPPDIIDHECHVVLLKGLSDSGDTGMALEHIQWVGD 182
           IL   +  +CKEGN L AS+L+ GL  D+   + HV+ LK L+D+ +   A+EHI+WVGD
Sbjct: 540 ILNTFILYICKEGNFLFASKLLCGLTYDVGHSDSHVIFLKYLADASEISTAIEHIKWVGD 599

Query: 183 NSPSILKAVSAELVTSLSSSLKPGPVIQLIRVMMGKGLVSYDDTWMDICDEISLTRC*SG 362
             PS+L  +S EL   L+SS KP P++Q++  M  K  + Y+D+W ++ +++      +G
Sbjct: 600 TLPSMLPTISTELFALLASSSKPEPILQMLLAMQEKSPLPYNDSWKELSNQLF-----TG 654

Query: 363 HTL 371
           H+L
Sbjct: 655 HSL 657


>ref|XP_004158532.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g14080-like [Cucumis sativus]
          Length = 640

 Score = 88.2 bits (217), Expect = 6e-16
 Identities = 38/93 (40%), Positives = 64/93 (68%)
 Frame = +3

Query: 3   ILTALVHSLCKEGNSLAASRLIRGLPPDIIDHECHVVLLKGLSDSGDTGMALEHIQWVGD 182
           +L+  +  LCK G+ LAAS+L+RGL  D+   + HV LLKG +D+G+  +A +H++WV +
Sbjct: 540 LLSTFILCLCKVGHFLAASKLLRGLASDVAHPDSHVTLLKGFADAGEVSLAKQHVEWVQE 599

Query: 183 NSPSILKAVSAELVTSLSSSLKPGPVIQLIRVM 281
            SPS+L  +S EL+  L SS K  P++++++ +
Sbjct: 600 TSPSMLSVISTELLAFLPSSPKADPILEILQTV 632


>emb|CBI21323.3| unnamed protein product [Vitis vinifera]
          Length = 676

 Score = 88.2 bits (217), Expect = 6e-16
 Identities = 42/93 (45%), Positives = 61/93 (65%)
 Frame = +3

Query: 3   ILTALVHSLCKEGNSLAASRLIRGLPPDIIDHECHVVLLKGLSDSGDTGMALEHIQWVGD 182
           IL   +  +CKEGN L AS+L+ GL  D+   + HV+ LK L+D+ +   A+EHI+WVGD
Sbjct: 540 ILNTFILYICKEGNFLFASKLLCGLTYDVGHSDSHVIFLKYLADASEISTAIEHIKWVGD 599

Query: 183 NSPSILKAVSAELVTSLSSSLKPGPVIQLIRVM 281
             PS+L  +S EL   L+SS KP P++Q++  M
Sbjct: 600 TLPSMLPTISTELFALLASSSKPEPILQMLLAM 632


>ref|XP_003549091.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g14080-like [Glycine max]
          Length = 647

 Score = 79.0 bits (193), Expect = 4e-13
 Identities = 37/91 (40%), Positives = 65/91 (71%)
 Frame = +3

Query: 3   ILTALVHSLCKEGNSLAASRLIRGLPPDIIDHECHVVLLKGLSDSGDTGMALEHIQWVGD 182
           IL++ + SLC++G+ +AAS+L+  L  DI   E HV+LL+ L+++ +  +A+EH++WV +
Sbjct: 536 ILSSFISSLCRKGHLMAASKLLCSLNHDIGCAESHVILLESLANAQEIPIAIEHLKWVQE 595

Query: 183 NSPSILKAVSAELVTSLSSSLKPGPVIQLIR 275
            SPSIL+ +   L+ SLSS+  P P++Q ++
Sbjct: 596 KSPSILQDICTGLLASLSSATCPEPILQFLK 626


>ref|XP_004138797.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g14080-like [Cucumis sativus]
          Length = 635

 Score = 77.8 bits (190), Expect = 9e-13
 Identities = 33/78 (42%), Positives = 55/78 (70%)
 Frame = +3

Query: 48  LAASRLIRGLPPDIIDHECHVVLLKGLSDSGDTGMALEHIQWVGDNSPSILKAVSAELVT 227
           LAAS+L+RGL  D+   + HV LLKG +D+G+  +A +H++WV + SPS+L  +S EL+ 
Sbjct: 550 LAASKLLRGLASDVAHPDSHVTLLKGFADAGEVSLAKQHVEWVQETSPSMLSVISTELLA 609

Query: 228 SLSSSLKPGPVIQLIRVM 281
            L SS K  P++++++ +
Sbjct: 610 FLPSSPKADPILEILQTV 627