BLASTX nr result

ID: Coptis21_contig00006118 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00006118
         (428 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003623651.1| hypothetical protein MTR_7g074070 [Medicago ...    99   4e-19
ref|XP_004142670.1| PREDICTED: uncharacterized protein LOC101209...    98   8e-19
ref|XP_002269239.1| PREDICTED: uncharacterized protein LOC100258...    97   1e-18
ref|XP_002326276.1| predicted protein [Populus trichocarpa] gi|2...    97   2e-18
gb|ABK93697.1| unknown [Populus trichocarpa] gi|118486849|gb|ABK...    97   2e-18

>ref|XP_003623651.1| hypothetical protein MTR_7g074070 [Medicago truncatula]
           gi|355498666|gb|AES79869.1| hypothetical protein
           MTR_7g074070 [Medicago truncatula]
          Length = 353

 Score = 99.0 bits (245), Expect = 4e-19
 Identities = 61/143 (42%), Positives = 73/143 (51%), Gaps = 41/143 (28%)
 Frame = +1

Query: 118 VTMENLIFGSGCLLGYMASRPXXXXXXXXXXXX---VGTIMNF----FLSPNFG------ 258
           V ME L+  + C+LG MASRP               VG I+NF     L+P  G      
Sbjct: 120 VLMEELVGVTACVLGDMASRPNFGLNELDFVFSTLVVGAILNFTLMYLLAPTLGASSASV 179

Query: 259 ----------------------------YKGLVFACVGFAAGLFGTAISNGLIMLRKKMD 354
                                       YKG +FA VGF AGL GTA+SNGLI +RKKMD
Sbjct: 180 PAIFASCPKSHMFEPGAFSLLDRLGTLVYKGTIFAAVGFGAGLAGTALSNGLIKMRKKMD 239

Query: 355 PNIETPSKAPPTILNALTWSAQM 423
           PN ETP+KAPPT+LN+LTW+A M
Sbjct: 240 PNFETPNKAPPTLLNSLTWAAHM 262


>ref|XP_004142670.1| PREDICTED: uncharacterized protein LOC101209534 isoform 1 [Cucumis
           sativus] gi|449449837|ref|XP_004142671.1| PREDICTED:
           uncharacterized protein LOC101209534 isoform 2 [Cucumis
           sativus] gi|449510965|ref|XP_004163824.1| PREDICTED:
           uncharacterized protein LOC101229310 isoform 1 [Cucumis
           sativus] gi|449510969|ref|XP_004163825.1| PREDICTED:
           uncharacterized protein LOC101229310 isoform 2 [Cucumis
           sativus]
          Length = 370

 Score = 97.8 bits (242), Expect = 8e-19
 Identities = 63/145 (43%), Positives = 73/145 (50%), Gaps = 43/145 (29%)
 Frame = +1

Query: 118 VTMENLIFGSGCLLGYMASRPXXXXXXXXXXXX---VGTIMNF----FLSPN-------- 252
           V ME L+  S C+LG MASRP               VG+I+NF     L+P         
Sbjct: 132 VLMEELVGVSSCVLGDMASRPNFGLNELDFVFSTLVVGSILNFTLMYLLAPTAAAGVAAQ 191

Query: 253 ----------------------------FGYKGLVFACVGFAAGLFGTAISNGLIMLRKK 348
                                       F YKG VFA VG AAGL GTA+SNGLIMLRKK
Sbjct: 192 RLPSIFASCPTSHMFEPGAFTLLDRVGTFVYKGTVFAAVGLAAGLVGTALSNGLIMLRKK 251

Query: 349 MDPNIETPSKAPPTILNALTWSAQM 423
           MDP  ETP+KAPPT+LNA+TW+  M
Sbjct: 252 MDPGFETPNKAPPTLLNAMTWAIHM 276


>ref|XP_002269239.1| PREDICTED: uncharacterized protein LOC100258770 [Vitis vinifera]
          Length = 351

 Score = 97.1 bits (240), Expect = 1e-18
 Identities = 61/143 (42%), Positives = 74/143 (51%), Gaps = 41/143 (28%)
 Frame = +1

Query: 118 VTMENLIFGSGCLLGYMASRPXXXXXXXXXXXX---VGTIMNFFL-----------SPN- 252
           V ME L+  + C++G MASRP               VG+IMNF L           +PN 
Sbjct: 119 VLMEELVGVTACVIGDMASRPNFGLNELDFVFSTLVVGSIMNFVLMYLLAPTASSVTPNL 178

Query: 253 --------------------------FGYKGLVFACVGFAAGLFGTAISNGLIMLRKKMD 354
                                     F YKG++FA VGFAAGL GTAISNGLI +RKKMD
Sbjct: 179 PAIFAGCPPGHMFESGSYGVLNRFGTFVYKGVLFATVGFAAGLVGTAISNGLISMRKKMD 238

Query: 355 PNIETPSKAPPTILNALTWSAQM 423
           PN  TP+K PPT+LNA+TW+  M
Sbjct: 239 PNFVTPNKPPPTVLNAITWAIHM 261


>ref|XP_002326276.1| predicted protein [Populus trichocarpa] gi|222833469|gb|EEE71946.1|
           predicted protein [Populus trichocarpa]
          Length = 269

 Score = 96.7 bits (239), Expect = 2e-18
 Identities = 61/143 (42%), Positives = 72/143 (50%), Gaps = 41/143 (28%)
 Frame = +1

Query: 118 VTMENLIFGSGCLLGYMASRPXXXXXXXXXXXX---VGTIMNF----FLSPN-------- 252
           V ME ++  S C+LG MASRP               VG I+NF     L+P         
Sbjct: 61  VLMEEVVGVSACVLGDMASRPNFGLDELDFVFSTLVVGCILNFTLMYLLAPTAAATSQTL 120

Query: 253 --------------------------FGYKGLVFACVGFAAGLFGTAISNGLIMLRKKMD 354
                                     F YKG +FA VGFAAGL GTA+SNGLI +RKKMD
Sbjct: 121 PAIFANCPTSHMFEPGAYGLMNRLGTFVYKGTIFAAVGFAAGLVGTALSNGLIKMRKKMD 180

Query: 355 PNIETPSKAPPTILNALTWSAQM 423
           P  ETP+KAPPT+LNALTW+  M
Sbjct: 181 PTFETPNKAPPTVLNALTWAIHM 203


>gb|ABK93697.1| unknown [Populus trichocarpa] gi|118486849|gb|ABK95259.1| unknown
           [Populus trichocarpa]
          Length = 357

 Score = 96.7 bits (239), Expect = 2e-18
 Identities = 61/143 (42%), Positives = 72/143 (50%), Gaps = 41/143 (28%)
 Frame = +1

Query: 118 VTMENLIFGSGCLLGYMASRPXXXXXXXXXXXX---VGTIMNF----FLSPN-------- 252
           V ME ++  S C+LG MASRP               VG I+NF     L+P         
Sbjct: 122 VLMEEVVGVSACVLGDMASRPNFGLDELDFVFSTLVVGCILNFTLMYLLAPTAAATSQTL 181

Query: 253 --------------------------FGYKGLVFACVGFAAGLFGTAISNGLIMLRKKMD 354
                                     F YKG +FA VGFAAGL GTA+SNGLI +RKKMD
Sbjct: 182 PAIFANCPTSHMFEPGAYGLMNRLGTFVYKGTIFAAVGFAAGLVGTALSNGLIKMRKKMD 241

Query: 355 PNIETPSKAPPTILNALTWSAQM 423
           P  ETP+KAPPT+LNALTW+  M
Sbjct: 242 PTFETPNKAPPTVLNALTWAIHM 264


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