BLASTX nr result

ID: Coptis21_contig00006109 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00006109
         (2934 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002285750.1| PREDICTED: uncharacterized protein LOC100253...   416   e-150
emb|CBI29937.3| unnamed protein product [Vitis vinifera]              409   e-139
emb|CBI16561.3| unnamed protein product [Vitis vinifera]              387   e-131
ref|XP_003531272.1| PREDICTED: uncharacterized protein LOC100819...   395   e-131
ref|XP_003629923.1| YTH domain family protein [Medicago truncatu...   374   e-127

>ref|XP_002285750.1| PREDICTED: uncharacterized protein LOC100253534 [Vitis vinifera]
          Length = 705

 Score =  416 bits (1069), Expect(3) = e-150
 Identities = 214/386 (55%), Positives = 266/386 (68%), Gaps = 9/386 (2%)
 Frame = +2

Query: 968  ADKASLPVEAATGNRKGDIDGNS----DGAMPFRANKPNTSLNSNGSKGRGVFPRGLSGT 1135
            AD+  L VE A GN  G   G +    +G+ P +    N+  NSNGS GRG  P G+  +
Sbjct: 191  ADQKPLSVETANGNSNGIASGGAMKGNNGSAPVKPTYQNSPFNSNGSYGRGALPGGVPAS 250

Query: 1136 DYQDPRYNFNGMGSYAPWMDATYFTDGQHRPTTRNSLSSTFSRTNNIQQGRNHNLQPLPN 1315
             YQDPR+ F+G+ S  PW+D   F+D   RP T  S++S+ S  NN+   RN  L+P  +
Sbjct: 251  GYQDPRFAFDGLRSPLPWLDGPVFSDP--RPVTSTSITSSISNANNVTASRN--LRPHSH 306

Query: 1316 LMGLQYQRQTSGLGGTPGFVNRTYPSNRFYGQYGTTARTG-GFGANGYDPRINSRGFFGV 1492
             MGLQ+ R  SG+G   GF+NR YP N+ YGQYG T R+G GFG+N YD R N R +  V
Sbjct: 307  FMGLQHPRPMSGMGTAHGFMNRMYP-NKLYGQYGNTVRSGLGFGSNAYDSRTNGRSWLAV 365

Query: 1493 DTXXXXXXXXXXXXXXXXXXXXXXSEMSRGPRA-GFKNQKG-GTLAVRGQNISSD-ANNK 1663
            D                       +E++RGPRA   KNQKG   +  +GQN+ S+ +N++
Sbjct: 366  DNKYKPRGRGIGFFGYGNENMDGLNELNRGPRAKSSKNQKGLAPVTAKGQNVQSNGSNDE 425

Query: 1664 DKD-TSAVPDRERYNREEFPLDYTVAKFFIIKSYSEDDIHKSIKYSVWASTPNGNKKLDA 1840
            +KD TS  PDR++YN  +FP+++T AKFFIIKSYSEDD+HKSIKY+VWASTPNGNKKLDA
Sbjct: 426  EKDRTSVFPDRDQYNHADFPVEHTEAKFFIIKSYSEDDVHKSIKYNVWASTPNGNKKLDA 485

Query: 1841 GYQEAQEKSGDCRLFLFFSVNTSGQFVGLAEMVGHVDFNKTLDYWQQDKWNGSFPVKWHI 2020
             Y+EAQEKS  C +FLFFSVNTSGQFVGLAEMVGHVDF+K ++YWQQDKWNG F VKWH+
Sbjct: 486  AYREAQEKSAGCPVFLFFSVNTSGQFVGLAEMVGHVDFHKNVEYWQQDKWNGCFSVKWHV 545

Query: 2021 VKDVPNILLKHITLENNDNKPVTNSR 2098
            VKDVPN LLKHITLENN+NKPVTNSR
Sbjct: 546  VKDVPNSLLKHITLENNENKPVTNSR 571



 Score =  112 bits (280), Expect(3) = e-150
 Identities = 67/145 (46%), Positives = 84/145 (57%), Gaps = 1/145 (0%)
 Frame = +1

Query: 2164 KPVTNSRDTQEVNFEKGIQMLKIFKDYSSKSCILDDFEFYESRQKTVXXXXXXXXXXXXX 2343
            KPVTNSRDTQEV  E+G+QMLKIFK++ SK+CILDDF FYESRQKT+             
Sbjct: 565  KPVTNSRDTQEVKLEQGLQMLKIFKEHCSKTCILDDFAFYESRQKTIQEKKAKQQQF--- 621

Query: 2344 XXXXXTDPVVSDEKEKGGTNGEPRLQISLEDDSALPNHPT-AAQSDVEHKQSEETELVGE 2520
                     V + K     NGE + Q SLE  S L    T A Q++ + K  E   +   
Sbjct: 622  ------QKQVWEGKPTDEKNGELKPQKSLEVASDLIKESTPAVQANGDRKVFENGSVAKS 675

Query: 2521 GEAPKGAKPIVATEKRVAVSGVANG 2595
            G+APK  KP + +EKR+  +GVANG
Sbjct: 676  GDAPKAFKPSIVSEKRIVANGVANG 700



 Score = 56.6 bits (135), Expect(3) = e-150
 Identities = 29/62 (46%), Positives = 35/62 (56%), Gaps = 2/62 (3%)
 Frame = +1

Query: 712 GLYGDNTSIMYH-GYGFQPYGTYTQSGS-VSTVGHDXXXXXXXXXXXXXXXXXSPTQSNG 885
           G+YGDN S+MYH GYG+ PYG Y  +GS V TVGHD                  PT ++G
Sbjct: 112 GVYGDNGSLMYHHGYGYAPYGPYPPAGSPVPTVGHDGQLYGPQHYQYPAPYFQPPTPTSG 171

Query: 886 PY 891
           PY
Sbjct: 172 PY 173


>emb|CBI29937.3| unnamed protein product [Vitis vinifera]
          Length = 694

 Score =  409 bits (1050), Expect(3) = e-139
 Identities = 213/388 (54%), Positives = 262/388 (67%), Gaps = 12/388 (3%)
 Frame = +2

Query: 971  DKASLPVEAATGNRK-----GDIDGNSDGAMPFRANKPNTSLNSNGSKGRGVFPRGLSGT 1135
            D+  L VEAA GN       G+++GN+ G    R +  N+SL+SNGS GR   P G+  +
Sbjct: 176  DQVPLSVEAAKGNTNNLVNGGNVNGNN-GPKALRPSHQNSSLSSNGSYGRASLPTGVPSS 234

Query: 1136 DYQDPRYNFNGMGSYAPWMDATYFTDGQHRPTTRNSLSSTFSRTNNIQQGRNHNLQPLPN 1315
             YQDPR+ F+G  S  P   A  F++GQ +       SS  S  NN   GRN N +P+P 
Sbjct: 235  GYQDPRFGFDGTRSLIP--SADMFSEGQSKHVASVGFSSPVSHANNFPSGRNQNFRPIPQ 292

Query: 1316 LMGLQYQRQTSGLGGTPGFVNRTYPSNRFYGQYGTTARTG-GFGANGYDPRINSRGFFGV 1492
            LM   + R  SGLG   GF++R YP+NR Y QYG   RTG GFG+NGYD R + RG+  V
Sbjct: 293  LM---HARAASGLGQASGFMSRMYPNNRMYDQYGNAFRTGSGFGSNGYDSRTSGRGWLTV 349

Query: 1493 DTXXXXXXXXXXXXXXXXXXXXXXSEMSRGPRA-GFKNQKGG---TLAVRGQNISSDANN 1660
            D+                      +E++RGPRA GFKNQKG    TLAVRGQN+  + NN
Sbjct: 350  DSRYRNKSRANSVLGYGNENMDGLNELNRGPRAKGFKNQKGFGPVTLAVRGQNLQLNGNN 409

Query: 1661 KDKD--TSAVPDRERYNREEFPLDYTVAKFFIIKSYSEDDIHKSIKYSVWASTPNGNKKL 1834
             + D   + VPD+E+YN E+FP +Y+ AKFFIIKSYSEDD+HKSIKY++WAST NGNKKL
Sbjct: 410  SNSDGNLTLVPDKEQYNSEDFPENYSDAKFFIIKSYSEDDVHKSIKYNMWASTANGNKKL 469

Query: 1835 DAGYQEAQEKSGDCRLFLFFSVNTSGQFVGLAEMVGHVDFNKTLDYWQQDKWNGSFPVKW 2014
            DA YQEAQ KSG C +FL FSVN SGQFVG+AEMVG VDFN++L+YWQQDKW G FPVKW
Sbjct: 470  DAAYQEAQGKSGSCPIFLLFSVNASGQFVGVAEMVGSVDFNRSLEYWQQDKWTGCFPVKW 529

Query: 2015 HIVKDVPNILLKHITLENNDNKPVTNSR 2098
            H++KD+PN LLKHITLENN+NKPVTNSR
Sbjct: 530  HVIKDIPNSLLKHITLENNENKPVTNSR 557



 Score =  100 bits (248), Expect(3) = e-139
 Identities = 67/147 (45%), Positives = 87/147 (59%), Gaps = 4/147 (2%)
 Frame = +1

Query: 2164 KPVTNSRDTQEVNFEKGIQMLKIFKDYSSKSCILDDFEFYESRQKTVXXXXXXXXXXXXX 2343
            KPVTNSRDTQEV FE+GIQ+LKIFK++SSK+ ILDDF FYE+RQ+T+             
Sbjct: 551  KPVTNSRDTQEVKFEQGIQVLKIFKNHSSKTTILDDFGFYEARQRTMQEKKAKQQLFQKQ 610

Query: 2344 XXXXXTDPVVSDEKEKGG--TNGEPRLQISLEDDSALPNHPTA-AQSDVEHKQSEET-EL 2511
                    +V D K   G  T+ + RL  S++  S+L   PT   +++ E K  EE    
Sbjct: 611  ARI-----LVRDVKPTDGVATDDKDRLHQSVDVASSLIKEPTGPVKANGELKALEEIGSA 665

Query: 2512 VGEGEAPKGAKPIVATEKRVAVSGVAN 2592
                +APK AKP V +EKRV  +GVAN
Sbjct: 666  AVADDAPKSAKPDVLSEKRVVPNGVAN 692



 Score = 38.5 bits (88), Expect(3) = e-139
 Identities = 23/61 (37%), Positives = 29/61 (47%), Gaps = 1/61 (1%)
 Frame = +1

Query: 712 GLYGDNTSIMYHGYGFQPYGTYTQSGS-VSTVGHDXXXXXXXXXXXXXXXXXSPTQSNGP 888
           G+YGD   I +HG+G+ PYGTY   GS V T+GHD                     + GP
Sbjct: 101 GVYGD---IYHHGFGY-PYGTYPPPGSPVPTMGHDGQLYGPQHYQYPTPYYQPQAPNGGP 156

Query: 889 Y 891
           Y
Sbjct: 157 Y 157


>emb|CBI16561.3| unnamed protein product [Vitis vinifera]
          Length = 675

 Score =  387 bits (994), Expect(2) = e-131
 Identities = 198/344 (57%), Positives = 244/344 (70%), Gaps = 5/344 (1%)
 Frame = +2

Query: 1082 NSNGSKGRGVFPRGLSGTDYQDPRYNFNGMGSYAPWMDATYFTDGQHRPTTRNSLSSTFS 1261
            NSNG    G  P G+  + YQDPR+ F+G+ S  PW+D   F+D   RP T  S++S+ S
Sbjct: 204  NSNGIAS-GALPGGVPASGYQDPRFAFDGLRSPLPWLDGPVFSDP--RPVTSTSITSSIS 260

Query: 1262 RTNNIQQGRNHNLQPLPNLMGLQYQRQTSGLGGTPGFVNRTYPSNRFYGQYGTTARTG-G 1438
              NN+   RN  L+P  + MGLQ+ R  SG+G   GF+NR YP N+ YGQYG T R+G G
Sbjct: 261  NANNVTASRN--LRPHSHFMGLQHPRPMSGMGTAHGFMNRMYP-NKLYGQYGNTVRSGLG 317

Query: 1439 FGANGYDPRINSRGFFGVDTXXXXXXXXXXXXXXXXXXXXXXSEMSRGPRA-GFKNQKG- 1612
            FG+N YD R N R +  VD                       +E++RGPRA   KNQKG 
Sbjct: 318  FGSNAYDSRTNGRSWLAVDNKYKPRGRGIGFFGYGNENMDGLNELNRGPRAKSSKNQKGL 377

Query: 1613 GTLAVRGQNISSD-ANNKDKD-TSAVPDRERYNREEFPLDYTVAKFFIIKSYSEDDIHKS 1786
              +  +GQN+ S+ +N+++KD TS  PDR++YN  +FP+++T AKFFIIKSYSEDD+HKS
Sbjct: 378  APVTAKGQNVQSNGSNDEEKDRTSVFPDRDQYNHADFPVEHTEAKFFIIKSYSEDDVHKS 437

Query: 1787 IKYSVWASTPNGNKKLDAGYQEAQEKSGDCRLFLFFSVNTSGQFVGLAEMVGHVDFNKTL 1966
            IKY+VWASTPNGNKKLDA Y+EAQEKS  C +FLFFSVNTSGQFVGLAEMVGHVDF+K +
Sbjct: 438  IKYNVWASTPNGNKKLDAAYREAQEKSAGCPVFLFFSVNTSGQFVGLAEMVGHVDFHKNV 497

Query: 1967 DYWQQDKWNGSFPVKWHIVKDVPNILLKHITLENNDNKPVTNSR 2098
            +YWQQDKWNG F VKWH+VKDVPN LLKHITLENN+NKPVTNSR
Sbjct: 498  EYWQQDKWNGCFSVKWHVVKDVPNSLLKHITLENNENKPVTNSR 541



 Score =  112 bits (280), Expect(2) = e-131
 Identities = 67/145 (46%), Positives = 84/145 (57%), Gaps = 1/145 (0%)
 Frame = +1

Query: 2164 KPVTNSRDTQEVNFEKGIQMLKIFKDYSSKSCILDDFEFYESRQKTVXXXXXXXXXXXXX 2343
            KPVTNSRDTQEV  E+G+QMLKIFK++ SK+CILDDF FYESRQKT+             
Sbjct: 535  KPVTNSRDTQEVKLEQGLQMLKIFKEHCSKTCILDDFAFYESRQKTIQEKKAKQQQF--- 591

Query: 2344 XXXXXTDPVVSDEKEKGGTNGEPRLQISLEDDSALPNHPT-AAQSDVEHKQSEETELVGE 2520
                     V + K     NGE + Q SLE  S L    T A Q++ + K  E   +   
Sbjct: 592  ------QKQVWEGKPTDEKNGELKPQKSLEVASDLIKESTPAVQANGDRKVFENGSVAKS 645

Query: 2521 GEAPKGAKPIVATEKRVAVSGVANG 2595
            G+APK  KP + +EKR+  +GVANG
Sbjct: 646  GDAPKAFKPSIVSEKRIVANGVANG 670


>ref|XP_003531272.1| PREDICTED: uncharacterized protein LOC100819200 isoform 1 [Glycine
            max]
          Length = 707

 Score =  395 bits (1014), Expect(2) = e-131
 Identities = 205/388 (52%), Positives = 262/388 (67%), Gaps = 11/388 (2%)
 Frame = +2

Query: 968  ADKASLPVEAATGNRKGDIDGNS----DGAMPFRANKPNTSLNSNGSKGRGVFPRGLSGT 1135
            AD+  LPVEAA GN  G  +G +    + A P +    N+S +S  S  R   P     +
Sbjct: 192  ADQKPLPVEAANGNSNGVSNGGNAKGNNAAAPIKQANQNSSFSSKASNERVAMPGRGPTS 251

Query: 1136 DYQDPRYNFNGMGSYAPWMDATYFTDGQHRPTTRNSLSSTFSRTNNIQQGRNHNLQPLPN 1315
             YQDPR+ ++G+ S  PW+DA  F+DGQ RP +  +++S+ S  NN    R+   +P   
Sbjct: 252  GYQDPRFGYDGVRSPIPWLDAPLFSDGQPRPVSSTTITSSISGGNNTAS-RSQTFRPNSQ 310

Query: 1316 LMGLQYQRQTSGLGGTPGFVNRTYPSNRFYGQYGTTARTG-GFGANGYDPRINSRGFFGV 1492
             MGL + R    +G T  F+NR YP N+ YGQYG T R+G G+G +GYD R N R +  V
Sbjct: 311  FMGLHHPRPMPAMGATHSFINRMYP-NKLYGQYGNTVRSGMGYGTHGYDSRANGRAWLAV 369

Query: 1493 DTXXXXXXXXXXXXXXXXXXXXXXSEMSRGPRA-GFKNQKGGT---LAVRGQNI-SSDAN 1657
            D+                      +E++RGPRA G KNQKG     LAV+GQN+ +S   
Sbjct: 370  DSKYKTRGRSGGYFGYGNENVDGLNELNRGPRAKGGKNQKGFAPTILAVKGQNLPASLGT 429

Query: 1658 NKDKD-TSAVPDRERYNREEFPLDYTVAKFFIIKSYSEDDIHKSIKYSVWASTPNGNKKL 1834
            +++KD TS VPDR++YN+ +FP +YT AKFF+IKSYSEDDIHKSIKY+VWAST NGNKKL
Sbjct: 430  DEEKDKTSTVPDRDQYNKADFPEEYTDAKFFVIKSYSEDDIHKSIKYNVWASTQNGNKKL 489

Query: 1835 DAGYQEAQEKSGDCRLFLFFSVNTSGQFVGLAEMVGHVDFNKTLDYWQQDKWNGSFPVKW 2014
            DA Y EAQ+K G C +FLFFSVNTSGQFVGLAEM+G VDFNK+++YWQQDKWNG FP+KW
Sbjct: 490  DAAYHEAQQKPGGCPVFLFFSVNTSGQFVGLAEMIGPVDFNKSVEYWQQDKWNGCFPLKW 549

Query: 2015 HIVKDVPNILLKHITLENNDNKPVTNSR 2098
            H+VKDVPN LL+HITL+NN+NKPVTNSR
Sbjct: 550  HVVKDVPNNLLRHITLDNNENKPVTNSR 577



 Score =  102 bits (253), Expect(2) = e-131
 Identities = 63/144 (43%), Positives = 78/144 (54%)
 Frame = +1

Query: 2164 KPVTNSRDTQEVNFEKGIQMLKIFKDYSSKSCILDDFEFYESRQKTVXXXXXXXXXXXXX 2343
            KPVTNSRDTQEV  E G++++KIFK+Y+SK+CILDDF FYE+RQKT+             
Sbjct: 571  KPVTNSRDTQEVMLEPGLKLIKIFKEYTSKTCILDDFGFYEARQKTILEKKAKQQFPKQV 630

Query: 2344 XXXXXTDPVVSDEKEKGGTNGEPRLQISLEDDSALPNHPTAAQSDVEHKQSEETELVGEG 2523
                  D       EK   NGE   Q S E  S +     A +   +HK  E       G
Sbjct: 631  WEGKPAD-------EKIEINGEVNTQKS-EVSSEVLKESLAEKDSDDHKVPENGCATKTG 682

Query: 2524 EAPKGAKPIVATEKRVAVSGVANG 2595
            +APKGAKP+V   K VA   V+NG
Sbjct: 683  DAPKGAKPVVPESKIVANGVVSNG 706


>ref|XP_003629923.1| YTH domain family protein [Medicago truncatula]
            gi|355523945|gb|AET04399.1| YTH domain family protein
            [Medicago truncatula]
          Length = 677

 Score =  374 bits (960), Expect(2) = e-127
 Identities = 199/383 (51%), Positives = 244/383 (63%), Gaps = 6/383 (1%)
 Frame = +2

Query: 968  ADKASLPVEAATGNRKGDIDGNSDGAMPFRANKPNTSLNSNGSKGRGVFPRGLSGTDYQD 1147
            AD+  L VEAA GN                     T+  +NG   +G  P   +   YQD
Sbjct: 184  ADQKPLSVEAANGN---------------------TNAGTNGVNAKGRTP---TSGGYQD 219

Query: 1148 PRYNFNGMGSYAPWMDATYFTDGQHRPTTRNSLSSTFSRTNNIQQGRNHNLQPLPNLMGL 1327
            PRY F+G  S   W+D   F+DGQ RP +   +SS+ S  NN    RN   +P    MGL
Sbjct: 220  PRYGFDGARSPNLWLDTPIFSDGQPRPVSSTVISSSISSGNNGTASRNQTYRPNSQYMGL 279

Query: 1328 QYQRQTSGLGGTPGFVNRTYPSNRFYGQYGTTARTG-GFGANGYDPRINSRGFFGVDTXX 1504
             + R    +G TPGF+NR YP+ R YGQYG + R+G G+G +GYD R N R +  VD   
Sbjct: 280  HHPRPIPAMGATPGFINRMYPNTR-YGQYGNSVRSGMGYGTHGYDSRTNGRAWLAVDNKY 338

Query: 1505 XXXXXXXXXXXXXXXXXXXXSEMSRGPRA-GFKNQK---GGTLAVRGQNISSDANNKDKD 1672
                                +E++RGPRA G KNQK      L V+GQN+  +  +++K+
Sbjct: 339  KTRGRNGGYFGYGNENTDGLNELNRGPRAKGGKNQKVFVPTVLTVKGQNVPVNTVDEEKE 398

Query: 1673 -TSAVPDRERYNREEFPLDYTVAKFFIIKSYSEDDIHKSIKYSVWASTPNGNKKLDAGYQ 1849
              S  PDRE+YN+ +FP +YT AKFF+IKSYSEDDIHKSIKY+VWAST NGNKKLDA YQ
Sbjct: 399  KNSTTPDREQYNKADFPEEYTDAKFFVIKSYSEDDIHKSIKYNVWASTQNGNKKLDAAYQ 458

Query: 1850 EAQEKSGDCRLFLFFSVNTSGQFVGLAEMVGHVDFNKTLDYWQQDKWNGSFPVKWHIVKD 2029
            EAQ+KSG C +FL FSVNTSGQFVGLAEM G VDFNK+L+YWQQDKW G FP+KWHIVKD
Sbjct: 459  EAQQKSGGCPIFLLFSVNTSGQFVGLAEMTGPVDFNKSLEYWQQDKWMGCFPLKWHIVKD 518

Query: 2030 VPNILLKHITLENNDNKPVTNSR 2098
            VPN +L+HITLENN+NKPVTNSR
Sbjct: 519  VPNNVLRHITLENNENKPVTNSR 541



 Score =  110 bits (274), Expect(2) = e-127
 Identities = 68/146 (46%), Positives = 88/146 (60%), Gaps = 2/146 (1%)
 Frame = +1

Query: 2164 KPVTNSRDTQEVNFEKGIQMLKIFKDYSSKSCILDDFEFYESRQKTVXXXXXXXXXXXXX 2343
            KPVTNSRDTQE+  E G+++LKIFK+YSSK+CILDDF FYE RQKT+             
Sbjct: 535  KPVTNSRDTQEIMLEPGLKLLKIFKEYSSKTCILDDFGFYEGRQKTI--LEKKAKQQFPK 592

Query: 2344 XXXXXTDPVVSDE--KEKGGTNGEPRLQISLEDDSALPNHPTAAQSDVEHKQSEETELVG 2517
                 T PV   +   EK   NGE   Q S E +S L    T A+ + ++K SE   +  
Sbjct: 593  QARLSTIPVWEGKPTDEKIEVNGETNTQKS-EVNSELLKESTLAKDNDDNKHSENGAVPT 651

Query: 2518 EGEAPKGAKPIVATEKRVAVSGVANG 2595
             G+APKGAKP+V +E ++  +GVANG
Sbjct: 652  TGDAPKGAKPVV-SESKIVPNGVANG 676


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