BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00006089
         (1629 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002278480.1| PREDICTED: F-box protein At5g46170 isoform 1...   520   e-145
emb|CAN73778.1| hypothetical protein VITISV_042179 [Vitis vinifera]   520   e-145
ref|XP_004137366.1| PREDICTED: F-box protein At5g46170-like [Cuc...   514   e-143
ref|XP_004134599.1| PREDICTED: F-box protein At5g46170-like [Cuc...   494   e-137
ref|XP_003593894.1| F-box family protein [Medicago truncatula] g...   493   e-137

>ref|XP_002278480.1| PREDICTED: F-box protein At5g46170 isoform 1 [Vitis vinifera]
            gi|359483890|ref|XP_003633032.1| PREDICTED: F-box protein
            At5g46170 isoform 2 [Vitis vinifera]
          Length = 399

 Score =  520 bits (1339), Expect = e-145
 Identities = 274/401 (68%), Positives = 312/401 (77%), Gaps = 14/401 (3%)
 Frame = +2

Query: 128  MSTSLRPDLSSKIYPYDLDSS-----YQYSIDHFDRLPDSILLIVFNKIDDIKALGRCCV 292
            M++S+RPD S++I+P   +S         +IDHFDRLPDS+LL+VFNKI D+KALGRCCV
Sbjct: 1    MASSMRPDPSTRIWPEPQNSPPPVMMMAEAIDHFDRLPDSLLLLVFNKIGDVKALGRCCV 60

Query: 293  VSRRFHGLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRAGVFANLIRFVFSGIVKPIQVI 472
            VSRRFH L                               G F++L R VF GIVKP+Q +
Sbjct: 61   VSRRFHTLVPQVENVVVRVDCVISDDESSSAAGSLEKSRGPFSHLFRLVFGGIVKPLQAL 120

Query: 473  TQFLGPKKSV----SSFALLGNED-----DEKANGVTHHSPTQVLKHFNEIKSLRIELPS 625
             QFLGPK+S     SS A+ G  +     D +  GVTHHSPTQVLK+FNEI+ LRIELPS
Sbjct: 121  GQFLGPKRSAPTTSSSLAVGGGSEEDGDVDHQTGGVTHHSPTQVLKNFNEIRFLRIELPS 180

Query: 626  GELGIEDGVLLKWRADFGSTLDNCVILGASSVIQPGKVAPSVAVGDNGGDGGFCNASNGD 805
            GELGIEDGVLLKWRADFGSTLDNCVILGA+SVI PG    S  V D+G D  FC ++ GD
Sbjct: 181  GELGIEDGVLLKWRADFGSTLDNCVILGAASVICPGPTKGS-GVQDSGNDA-FCVSNGGD 238

Query: 806  DNGSIPDSFYTSGGLKLRVVWTISSLIAASARHYLLQPIIAEHHTLDNLILTDADGQGVL 985
            DNGSIP+SFYT+GGLKLRVVWTISSLIAASARHYLLQPIIAEH TLD+L+LTDADGQGVL
Sbjct: 239  DNGSIPESFYTNGGLKLRVVWTISSLIAASARHYLLQPIIAEHKTLDSLVLTDADGQGVL 298

Query: 986  CMNRAQLEELRVKPLSASTASKRTLVPALNMRLWYAPHLELPNGVVLIGATLVAIRPCEQ 1165
            CMNR QLEELRVKPLSAS+ASKRTLVPALNMRLWYAPHLELP+G+VL GATLVAIRP EQ
Sbjct: 299  CMNRDQLEELRVKPLSASSASKRTLVPALNMRLWYAPHLELPDGIVLKGATLVAIRPSEQ 358

Query: 1166 TLGKKEVSDGSWISSAFEEPYGTAVKLLIKRRTYCLEMNSF 1288
            ++ KKEVSDGSW+S+AFEEPYGTA K+L+KRRTYCLEMNSF
Sbjct: 359  SVTKKEVSDGSWVSAAFEEPYGTAAKMLVKRRTYCLEMNSF 399


>emb|CAN73778.1| hypothetical protein VITISV_042179 [Vitis vinifera]
          Length = 399

 Score =  520 bits (1338), Expect = e-145
 Identities = 274/401 (68%), Positives = 312/401 (77%), Gaps = 14/401 (3%)
 Frame = +2

Query: 128  MSTSLRPDLSSKIYPYDLDSS-----YQYSIDHFDRLPDSILLIVFNKIDDIKALGRCCV 292
            M++S+RPD S++I+P   +S         +IDHFDRLPDS+LL+VFNKI D+KALGRCCV
Sbjct: 1    MASSMRPDPSTRIWPEPQNSPPPVMMMAEAIDHFDRLPDSLLLLVFNKIGDVKALGRCCV 60

Query: 293  VSRRFHGLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRAGVFANLIRFVFSGIVKPIQVI 472
            VSRRFH L                               G F++L R VF GIVKP+Q +
Sbjct: 61   VSRRFHTLVPQVENVVVRVDCVISDDESSSAAGSLEKSRGPFSHLFRLVFGGIVKPLQAL 120

Query: 473  TQFLGPKKSV----SSFALLGNED-----DEKANGVTHHSPTQVLKHFNEIKSLRIELPS 625
             QFLGPK+S     SS A+ G  +     D +  GVTHHSPTQVLK+FNEI+ LRIELPS
Sbjct: 121  GQFLGPKRSAPTTSSSLAVGGGSEEDGDVDHQTGGVTHHSPTQVLKNFNEIRFLRIELPS 180

Query: 626  GELGIEDGVLLKWRADFGSTLDNCVILGASSVIQPGKVAPSVAVGDNGGDGGFCNASNGD 805
            GELGIEDGVLLKWRADFGSTLDNCVILGA+SVI PG    S  V D+G D  FC ++ GD
Sbjct: 181  GELGIEDGVLLKWRADFGSTLDNCVILGAASVICPGPTKGS-GVQDSGXDA-FCVSNGGD 238

Query: 806  DNGSIPDSFYTSGGLKLRVVWTISSLIAASARHYLLQPIIAEHHTLDNLILTDADGQGVL 985
            DNGSIP+SFYT+GGLKLRVVWTISSLIAASARHYLLQPIIAEH TLD+L+LTDADGQGVL
Sbjct: 239  DNGSIPESFYTNGGLKLRVVWTISSLIAASARHYLLQPIIAEHKTLDSLVLTDADGQGVL 298

Query: 986  CMNRAQLEELRVKPLSASTASKRTLVPALNMRLWYAPHLELPNGVVLIGATLVAIRPCEQ 1165
            CMNR QLEELRVKPLSAS+ASKRTLVPALNMRLWYAPHLELP+G+VL GATLVAIRP EQ
Sbjct: 299  CMNRDQLEELRVKPLSASSASKRTLVPALNMRLWYAPHLELPDGIVLKGATLVAIRPSEQ 358

Query: 1166 TLGKKEVSDGSWISSAFEEPYGTAVKLLIKRRTYCLEMNSF 1288
            ++ KKEVSDGSW+S+AFEEPYGTA K+L+KRRTYCLEMNSF
Sbjct: 359  SVTKKEVSDGSWVSAAFEEPYGTAAKMLVKRRTYCLEMNSF 399


>ref|XP_004137366.1| PREDICTED: F-box protein At5g46170-like [Cucumis sativus]
            gi|449520084|ref|XP_004167064.1| PREDICTED: F-box protein
            At5g46170-like [Cucumis sativus]
          Length = 406

 Score =  514 bits (1323), Expect = e-143
 Identities = 274/407 (67%), Positives = 310/407 (76%), Gaps = 22/407 (5%)
 Frame = +2

Query: 134  TSLRPDLSSKIYPYDLDSSYQYS----------IDHFDRLPDSILLIVFNKIDDIKALGR 283
            +SLR DL+SKIYP + DS + ++          IDHFDRLPDS+LL++FNKI D+KALGR
Sbjct: 2    SSLRLDLTSKIYP-EPDSLFSFNSSSISSTSCCIDHFDRLPDSLLLLIFNKIGDVKALGR 60

Query: 284  CCVVSRRFHGLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRAGVFANLIRFVFSGIVKPI 463
            CCVVSRRFH L                               G F N+ RFVF GIVKP+
Sbjct: 61   CCVVSRRFHCLVPQVENVVVRVDCVISDDESSSSSSSSGKSRGPFFNIFRFVFGGIVKPL 120

Query: 464  QVITQFLGPKK---------SVSSFALLGNEDDE-KANGVTHHSPTQVLKHFNEIKSLRI 613
            Q + QFLG  +         S SS A+  +ED E    GVTHHSPTQVLK+FNEI+ LRI
Sbjct: 121  QALGQFLGQTRASSTLASSSSTSSLAVGTDEDGEIDQGGVTHHSPTQVLKNFNEIRFLRI 180

Query: 614  ELPSGELGIEDGVLLKWRADFGSTLDNCVILGASSVIQPGKVAPSVAVGDNGGDGGFCNA 793
            ELPSGELGI+DGVLLKWRADFGSTLDNCVILGASSVIQPG + PS+A  DNG DGGFC  
Sbjct: 181  ELPSGELGIDDGVLLKWRADFGSTLDNCVILGASSVIQPGSIKPSIAQ-DNGTDGGFCMG 239

Query: 794  SNG--DDNGSIPDSFYTSGGLKLRVVWTISSLIAASARHYLLQPIIAEHHTLDNLILTDA 967
            + G  DDNGSIP+SFYT+GGLKLRVVWTISSLIAASARHYLLQPIIA+H TLD+L+LTDA
Sbjct: 240  NGGASDDNGSIPESFYTNGGLKLRVVWTISSLIAASARHYLLQPIIADHKTLDSLVLTDA 299

Query: 968  DGQGVLCMNRAQLEELRVKPLSASTASKRTLVPALNMRLWYAPHLELPNGVVLIGATLVA 1147
            DGQGVLCMN+ QLEELRVKPLSAS+ASKRTLVPALNMRLWYA HLELPNG++L GATLVA
Sbjct: 300  DGQGVLCMNKDQLEELRVKPLSASSASKRTLVPALNMRLWYATHLELPNGLILKGATLVA 359

Query: 1148 IRPCEQTLGKKEVSDGSWISSAFEEPYGTAVKLLIKRRTYCLEMNSF 1288
            IRP EQ+  KK+VSD  W S+AFEEPY TA K+L+KRRTYCLEMNSF
Sbjct: 360  IRPSEQSAAKKDVSDCFWASTAFEEPYRTAAKMLVKRRTYCLEMNSF 406


>ref|XP_004134599.1| PREDICTED: F-box protein At5g46170-like [Cucumis sativus]
          Length = 407

 Score =  494 bits (1271), Expect = e-137
 Identities = 264/405 (65%), Positives = 298/405 (73%), Gaps = 22/405 (5%)
 Frame = +2

Query: 140  LRPDLSSKIYPYD------LDSSYQYSIDHFDRLPDSILLIVFNKIDDIKALGRCCVVSR 301
            LRPD  ++I+           S   YS DHFDRLPDS+LL++FN+I D+KALGRCC VSR
Sbjct: 6    LRPDPPARIFSIQDGVFAQTYSRCNYSDDHFDRLPDSLLLLIFNRIGDVKALGRCCAVSR 65

Query: 302  RFHGLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRAGVFANLIRFVFSGIVKPIQVITQF 481
            RFH +                                 F+NL R V  GIVKP+Q + QF
Sbjct: 66   RFHSIVSQVDNVVVRVDCVISDDDFSSASSSSDKSRSGFSNLFRMVLGGIVKPLQALGQF 125

Query: 482  LGPKK-------------SVSSFALLGNEDDEKA-NGVTHHSPTQVLKHFNEIKSLRIEL 619
            LGPK+             S SS A+   ED E   +GVTHHSPTQVLK+FNEI+ LRIEL
Sbjct: 126  LGPKRVTSSGLGSASSSLSTSSLAVGREEDGESGQSGVTHHSPTQVLKNFNEIRFLRIEL 185

Query: 620  PSGELGIEDGVLLKWRADFGSTLDNCVILGASSVIQPGKVAPSVAVGDNGGDGGFC--NA 793
            PSGELGI+DG+LLKWRADFGSTLDNCVILGA+SVI  G     V   +NG DG FC  N 
Sbjct: 186  PSGELGIDDGILLKWRADFGSTLDNCVILGAASVIHVGSFNKHVQ--ENGTDG-FCSGNG 242

Query: 794  SNGDDNGSIPDSFYTSGGLKLRVVWTISSLIAASARHYLLQPIIAEHHTLDNLILTDADG 973
               DD+GSIP+SFYT+GGLKLRVVWTISSLIAASARHYLLQPIIAEH TLDNL+LTDADG
Sbjct: 243  PAADDSGSIPESFYTNGGLKLRVVWTISSLIAASARHYLLQPIIAEHKTLDNLVLTDADG 302

Query: 974  QGVLCMNRAQLEELRVKPLSASTASKRTLVPALNMRLWYAPHLELPNGVVLIGATLVAIR 1153
            QG+LCMN+ QLEELRVKPLSASTASKRTLVPALNMRLWYAPHLELP G+VL GATLVAIR
Sbjct: 303  QGMLCMNKDQLEELRVKPLSASTASKRTLVPALNMRLWYAPHLELPGGIVLKGATLVAIR 362

Query: 1154 PCEQTLGKKEVSDGSWISSAFEEPYGTAVKLLIKRRTYCLEMNSF 1288
            P EQ++ KKEVSDGSW+S+AFEEPYGTA K+L+KRRTYCLEMNSF
Sbjct: 363  PSEQSMTKKEVSDGSWLSNAFEEPYGTAAKILVKRRTYCLEMNSF 407


>ref|XP_003593894.1| F-box family protein [Medicago truncatula]
            gi|355482942|gb|AES64145.1| F-box family protein
            [Medicago truncatula]
          Length = 389

 Score =  493 bits (1268), Expect = e-137
 Identities = 271/396 (68%), Positives = 297/396 (75%), Gaps = 12/396 (3%)
 Frame = +2

Query: 137  SLRPDLS-SKIYPYDLDSSYQYSIDHFDRLPDSILLIVFNKIDDIKALGRCCVVSRRFHG 313
            S+R D   ++IYP   + SY   IDHFDR+PDS+LL+VFNKI D+KALGRCCVVSRRFH 
Sbjct: 3    SIRADQQPNRIYP---EPSYFPQIDHFDRIPDSLLLLVFNKIGDVKALGRCCVVSRRFHS 59

Query: 314  LXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRAGVFANLIRFVFSGIVKPIQVITQFLGPK 493
            L                               G F NL+R VF GI KPIQ + QFLGPK
Sbjct: 60   LVPQVENVVVRVDCVISDDDSNSSVNSSDKSRGPFWNLLRLVFGGIAKPIQTLGQFLGPK 119

Query: 494  K---------SVSSFALLGNEDDEKANGVTHHSPTQVLKHFNEIKSLRIELPSGELGIED 646
            +         S SS   +G+E+D    GVTHHSPTQVLK+FNEI+ LRIELPSGELGIED
Sbjct: 120  RGSNSSVNSGSGSSPLAVGSEEDGDG-GVTHHSPTQVLKNFNEIRLLRIELPSGELGIED 178

Query: 647  GVLLKWRADFGSTLDNCVILGASSVIQPGKVAPSVAVGDNGGDGGFCNASNGDDNGSIPD 826
            GVLLKWRADFGSTLDNCVILGASSV QP      VAV     DGG  N + GDDNGSIPD
Sbjct: 179  GVLLKWRADFGSTLDNCVILGASSVFQPKSQDGVVAV-----DGGGANNNGGDDNGSIPD 233

Query: 827  SFYTSGGLKLRVVWTISSLIAASARHYLLQPIIAEHHTLDNLILTDADGQGVLCMNRAQL 1006
            SFYT+GGLKLRVVWTISSLIAASARHYLLQPII+EH TLDNL+LTDADGQGVL MNR QL
Sbjct: 234  SFYTNGGLKLRVVWTISSLIAASARHYLLQPIISEHKTLDNLVLTDADGQGVLYMNRDQL 293

Query: 1007 EELRVKPLSASTASKRTLVPALNMRLWYAPHLELPNGVVLIGATLVAIRPCE--QTLGKK 1180
            EELRVKPLSAS+ASKRTLVPALNMRLWYAPHLELP+GVVL GATLVAIRP E   T GKK
Sbjct: 294  EELRVKPLSASSASKRTLVPALNMRLWYAPHLELPDGVVLKGATLVAIRPSELSPTAGKK 353

Query: 1181 EVSDGSWISSAFEEPYGTAVKLLIKRRTYCLEMNSF 1288
            E SD SW+S+AFEEPY +A  +LIKRRTYCLEMNSF
Sbjct: 354  EGSDLSWVSTAFEEPYRSAAAMLIKRRTYCLEMNSF 389