BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00006079
         (1133 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002510618.1| ubiquitin-protein ligase, putative [Ricinus ...   150   4e-34
emb|CAN67605.1| hypothetical protein VITISV_030993 [Vitis vinifera]   148   2e-33
ref|XP_002510608.1| conserved hypothetical protein [Ricinus comm...   145   1e-32
ref|XP_002284795.1| PREDICTED: F-box protein SKIP23-like [Vitis ...   144   4e-32
ref|XP_002300674.1| predicted protein [Populus trichocarpa] gi|2...   142   2e-31

>ref|XP_002510618.1| ubiquitin-protein ligase, putative [Ricinus communis]
            gi|223551319|gb|EEF52805.1| ubiquitin-protein ligase,
            putative [Ricinus communis]
          Length = 398

 Score =  150 bits (380), Expect = 4e-34
 Identities = 121/382 (31%), Positives = 175/382 (45%), Gaps = 15/382 (3%)
 Frame = -3

Query: 1101 WSELLCDLTHEIQERLAL-DDLIRFSSVCSSWNSLSGSFLRH-KGRLPWLIVPYNVDPNV 928
            WS+L  +L   I + L +  D +   +VC +W         H   +LPWL++P       
Sbjct: 5    WSQLPPELIEIISKGLTIYSDYLYSRAVCHAWRFSIPKTPNHLPPQLPWLMLP------- 57

Query: 927  GRDPNYCSDGILGFFSILDGLTYKLEIPELLGR-RICGTAFGWFITVHGNSEMQLLHPFT 751
             +  +  +     FFS+     + L +PE+  R R CG++ GW + +     + L++P T
Sbjct: 58   -QSQSQSNQSRRAFFSLSTNKFHFLNLPEVSYRKRHCGSSHGWLMILDDTPTILLINPLT 116

Query: 750  RKVVQLPALTEFPYFVGTRFSEEKGFLYQLQQRLDDTENISEVNSDYMRDFHIYKAVTSP 571
            R  + LP L+ FP  +   +S+  G  Y L+  L +   +S      MRD  I K V S 
Sbjct: 117  RAKLSLPPLSSFPNVISFNYSDI-GREYALRNLLGERVTVS---LRQMRDSFIRKVVLSS 172

Query: 570  GLTNSSQPSVVIAIPMVYRQLYFCRPGKDSKWKRVIGKTVNYSDVTLYKGDFYAVRHTGE 391
                 +   VVIAI      L +CR G D  W  V        DV    G FYAV   G+
Sbjct: 173  SPLKDNN-FVVIAILNQTDDLAYCRNG-DKSWSLVENARSFCEDVIFVNGMFYAVNKAGQ 230

Query: 390  VDVVKNLDDADGSSVPTTSFVISATKDYDLNAENNYLVDSSNELLLVIRIL--------P 235
            + +     D+     P  SF+ +  +      +  YLV+S +ELLLV R L        P
Sbjct: 231  IVICDISSDS-----PRVSFMETPRQ---AGGDMQYLVNSGDELLLVTRYLDLEYEFDHP 282

Query: 234  DFEGKSYRFTQKFVVIKLDFSGPNWVEVKDLGDCALFVGFNNSFSVVASDFPGCKRNCIY 55
            D E      T +F V +LD++GP W+ +  LGD ALF+G N+S S+ A+DF GC  NCIY
Sbjct: 283  DMEPHLIYRTIRFEVFRLDWNGPQWLRMSTLGDKALFIGENSSLSLSATDFSGCMGNCIY 342

Query: 54   XXXXXXXXXXTG----HDKGIF 1
                       G    HD GIF
Sbjct: 343  YTDDYLDANYDGHFGDHDLGIF 364


>emb|CAN67605.1| hypothetical protein VITISV_030993 [Vitis vinifera]
          Length = 1290

 Score =  148 bits (374), Expect = 2e-33
 Identities = 112/365 (30%), Positives = 173/365 (47%), Gaps = 7/365 (1%)
 Frame = -3

Query: 1128 EISMNNFSGWSELLCDLTHEIQERL-ALDDLIRFSSVCSSWNSL--SGSFLRHKGRLPWL 958
            +I+    + WS++  D    I E+L +++D +RF  VC SW S+           + PWL
Sbjct: 913  KINQTVMADWSKMPDDPLKLIAEKLHSVEDYVRFGGVCKSWYSIFEDKECCCPSSKSPWL 972

Query: 957  IVPYNVDPNVGRDPNYCSDGILGFFSILDGLTYKLEIPELLGRRICGTAFGWFITVHGNS 778
            ++    +             I GF+S L G  Y++ +PE++G+   G+ +GW +T+  + 
Sbjct: 973  MLAEKENSE-----------IRGFYSPLSGKVYEIRLPEVVGKWCWGSPYGWLVTIGTDL 1021

Query: 777  EMQLLHPFTRKVVQLPALTEFPYFVGTRFSEEKGFLYQLQQRLDDTENISEVNSDYMRDF 598
            +M LL+P TR  + LP+L   P                L   +D     S       +D 
Sbjct: 1022 DMCLLNPLTRVQILLPSLRACP---------------NLNTLID-----SSTQGSRSKDI 1061

Query: 597  HIYKAVTSPGLTNSSQPSVVIAIPMVYRQLYFCRPGKDSKWKRVIGKTVNYSDVTLYKGD 418
             IYKAV S     SS    V+ I   Y +L F +PG  + W  +  ++    D+  + G 
Sbjct: 1062 FIYKAVLSS--APSSPDCAVMIIYSDYGRLAFTKPGHQT-WTLLESESGPVDDIIYFNGS 1118

Query: 417  FYAVRHTGEVDVVKNLDDADGSSVPTTSFVIS-ATKDYD-LNAENNYLVDSSNELLLVIR 244
            F AV  + EV +     D  GS + T  F  + A +D D +  E  YLV+S  E+ +V R
Sbjct: 1119 FLAVNLSWEVWIC----DISGSQLKTIRFAAAPALQDVDEIEYEAKYLVESGGEIYMVTR 1174

Query: 243  ILPDFEGKS--YRFTQKFVVIKLDFSGPNWVEVKDLGDCALFVGFNNSFSVVASDFPGCK 70
             L D   +   Y  T  F V+KLD     W EV++L  C+ F+G N+SFS  ASD+P  +
Sbjct: 1175 NLYDTARRDIPYMRTWTFSVLKLDMCNKRWEEVENLDHCSFFLGNNHSFSTWASDYPEFR 1234

Query: 69   RNCIY 55
            +N IY
Sbjct: 1235 KNSIY 1239


>ref|XP_002510608.1| conserved hypothetical protein [Ricinus communis]
            gi|223551309|gb|EEF52795.1| conserved hypothetical
            protein [Ricinus communis]
          Length = 406

 Score =  145 bits (367), Expect = 1e-32
 Identities = 110/380 (28%), Positives = 180/380 (47%), Gaps = 11/380 (2%)
 Frame = -3

Query: 1107 SGWSELLCDLTHEI-QERLALDDLIRFSSVCSSW-NSLSGSFLRHKGRLPWLIVPYNVDP 934
            S WSEL  +L   I Q++    D I   +VC SW +++         +LPWL++PY+ + 
Sbjct: 2    SNWSELPQELLQTITQKQSNYVDYISTRAVCKSWWSAIPKKPHDLLCQLPWLLLPYHKN- 60

Query: 933  NVGRDPNYCSDGILGFFSILDGLTYKLEIPELLGRRICGTAFGWFITVHGNSEMQLLHPF 754
                +PN+      GF+++ DG TY LE+PE + +R CG++ GW + V     + LL+P 
Sbjct: 61   ----NPNH-----RGFYNLADGKTYHLELPETIEKRCCGSSHGWLVMVEDTPSIFLLNPL 111

Query: 753  TRKVVQLPALTEFPYFVGTRFSEEKGFLYQLQQRLDDTENISEVNSDYMRDFHIYKAVTS 574
            T+  ++LP+L+ FPYF           +Y+  + +++  N        +R+ +I KA+ S
Sbjct: 112  TKARIELPSLSTFPYF-------PTEVVYENSRNINEYFNTKA--KLRIRETYIRKAIVS 162

Query: 573  --PGLTNSSQPSVVIAIPMVYRQLYFCRPGKDSKWKRV--IGKTVNYSDVTLYKGDFYAV 406
              P   N +  ++   I      + FC+ G D+ W  +    + ++Y DV  ++G FYAV
Sbjct: 163  EDPSTGNFAVMAIYKTINST-ENIAFCKSG-DATWFTIQETSQKIHYQDVMFHRGKFYAV 220

Query: 405  RHTGEVDVVKNLDDADGSSVPTTSFVISATKDYDLNAENNYLVDSSNELLLVIRILPDFE 226
               G V +          + P+   V        L     + + S +E L++      + 
Sbjct: 221  DDKGRVSIC-----ITDINPPSVIQVADPPPVPPLMGYKQWYLASLDEDLILAGRFRKYR 275

Query: 225  GKSYRF-TQKFVVIKLDFSGPNWVEVKDLGDCALFVGFNNSFSVVASDFPGCKRNCIY-- 55
            G  Y + T KF+V KLD S  NW+E+  LGD   F+G+N   S+   ++     NCIY  
Sbjct: 276  GSGYEYQTHKFMVYKLDASSSNWLELDGLGDMLSFLGWNCFHSISTQNYRNYSGNCIYFT 335

Query: 54   --XXXXXXXXXXTGHDKGIF 1
                         GHD GIF
Sbjct: 336  DDKFIVGSDFPWEGHDYGIF 355


>ref|XP_002284795.1| PREDICTED: F-box protein SKIP23-like [Vitis vinifera]
          Length = 389

 Score =  144 bits (363), Expect = 4e-32
 Identities = 121/359 (33%), Positives = 164/359 (45%), Gaps = 10/359 (2%)
 Frame = -3

Query: 1101 WSELLCDLTHEIQERLAL-DDLIRFSSVCSSWNSLSGSFLRH-KGRLPWLIVPYNVDPNV 928
            WS+L  +L   I ++  +  D +RF +VC +W +       H   +LPWL++P +   + 
Sbjct: 4    WSQLHPELLDFIAKKFKIYTDYVRFRAVCHNWRASVPKTPHHLPTQLPWLMLPQSQPHHT 63

Query: 927  GRDPNYCSDGILGFFSILDGLTYKLEIPELLGRRIC-GTAFGWFITVHGNSEMQLLHPFT 751
             R           FFS+     + L++PE   RR   G++ GW + +    E+ LL+P T
Sbjct: 64   HRP----------FFSLSLNKFHFLQLPEASHRRRRRGSSHGWLLILDEAPEIFLLNPLT 113

Query: 750  RKVVQLPALTEFPYFVGTRFSEEKGFLYQLQQRLDDTENISEVNSDYMRDFHIYKAVTSP 571
            R  V LP L+ FP  V   F++  G  Y L+    D    S      MRD  I K + S 
Sbjct: 114  RSKVHLPPLSTFPNVVRFNFADV-GREYALRTSSGDVYTRSLKK---MRDSFIKKTILSS 169

Query: 570  GLTNSSQPSVVIAIPMVYRQLYFCRPGKDSKWKRVIGKTVNYSDVTLYKGDFYAVRHTGE 391
               N S    V+ +      L  CR   DS W  +        DV  ++G FYAV   G 
Sbjct: 170  SPANGSDFIAVVILNQT-GDLALCRKSDDS-WTFLEDAQSYAEDVIFHRGLFYAVNKYGS 227

Query: 390  VDVVKNLDDADGSSVPTTSFVISATKDYDLNAENNYLVDSSNELLLVIRIL-------PD 232
            + V     D  GSS P  S +           +  YLV+S  ELLLV R L       PD
Sbjct: 228  IAVC----DVSGSS-PRVSII---EMPQQFGGDLQYLVESGEELLLVTRYLDLTYDVEPD 279

Query: 231  FEGKSYRFTQKFVVIKLDFSGPNWVEVKDLGDCALFVGFNNSFSVVASDFPGCKRNCIY 55
                 YR T +F V +LD   P W  V  LGD ALF+G N S S+ + DFPGCK NCIY
Sbjct: 280  QTSLIYR-TTRFQVCRLDLKAPRWEVVSSLGDRALFLGENLSLSLSSVDFPGCKGNCIY 337


>ref|XP_002300674.1| predicted protein [Populus trichocarpa] gi|222842400|gb|EEE79947.1|
            predicted protein [Populus trichocarpa]
          Length = 393

 Score =  142 bits (357), Expect = 2e-31
 Identities = 114/379 (30%), Positives = 177/379 (46%), Gaps = 12/379 (3%)
 Frame = -3

Query: 1101 WSELLCDLTHEIQERLAL-DDLIRFSSVCSSWNSLSGSFLRH-KGRLPWLIVPYNVDPNV 928
            W++L  +L   I +++ +  D + F +VC +W S       H   +LPWL++P +     
Sbjct: 5    WTQLPPELIEIISKKITIYSDYLHFQAVCHAWKSSIPKTPNHLPPQLPWLLLPQSQSNQ- 63

Query: 927  GRDPNYCSDGILGFFSILDGLTYKLEIPELLGRRI-CGTAFGWFITVHGNSEMQLLHPFT 751
                         FF++     + L +PE   R+  CG++ GW I +  +  + +++P T
Sbjct: 64   --------SSYRAFFNLSTYKFHSLNLPEASHRKKHCGSSHGWLIILDDSPSILVINPLT 115

Query: 750  RKVVQLPALTEFPYFVGTRFSEE-KGFLYQLQQRLDDTENISEVNSDYMRDFHIYKAVTS 574
            R+ + LPA++ FP  V   ++   + +L    Q   +T ++ +     MRD  I K V S
Sbjct: 116  RRKIHLPAISSFPNVVSFDYANVGREYLLVNPQGERNTASLRQ-----MRDGFIKKVVMS 170

Query: 573  PG-LTNSSQPSVVIAIPMVYRQLYFCRPGKDSKWKRVIGKTVNYSDVTLYKGDFYAVRHT 397
               L       V +AI      L +C+ G D  W  V        DV  + G FYAV   
Sbjct: 171  SSPLEKKGDFFVAMAILCSTGDLAYCKNG-DECWNIVENSRSFSEDVIYFNGLFYAVNKA 229

Query: 396  GEVDVVKNLDDADGSSVPTTSFVISATKDYDLNAENNYLVDSSNELLLVIRILP---DFE 226
            G++ V     D +G+S P  SF+ +  +   +  +  YLV S + LLLV R L    +F+
Sbjct: 230  GQIVVC----DVNGNS-PKVSFIETPRQ---IGGDMQYLVSSGDGLLLVTRYLDLDVEFD 281

Query: 225  GKSYRFTQKFVVIKLDFSGPNWVEVKDLGDCALFVGFNNSFSVVASDFPGCKRNCIYXXX 46
               Y+ T +F V KLD +GP W  V  LGD  LF+G N+S ++ AS   GC  +CIY   
Sbjct: 282  IFIYK-TARFEVFKLDLNGPRWERVTSLGDMMLFIGENSSLALSASGLSGCMGDCIYYTD 340

Query: 45   XXXXXXXTG----HDKGIF 1
                    G    HD GIF
Sbjct: 341  DYSANNYDGHIGEHDLGIF 359