BLASTX nr result

ID: Coptis21_contig00006067 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00006067
         (209 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002270913.2| PREDICTED: uncharacterized protein LOC100253...    62   5e-08
emb|CBI16670.3| unnamed protein product [Vitis vinifera]               60   2e-07
ref|XP_002302496.1| predicted protein [Populus trichocarpa] gi|2...    56   3e-06

>ref|XP_002270913.2| PREDICTED: uncharacterized protein LOC100253028 [Vitis vinifera]
          Length = 429

 Score = 62.0 bits (149), Expect = 5e-08
 Identities = 31/67 (46%), Positives = 41/67 (61%)
 Frame = +1

Query: 7   SRSRMDMRGTEKENQGTCPVCRKVFQATDIEHVLNLIKTYTPELGLEETEIDDDEEFQCA 186
           S S   M G  + + G CPVCRKVF A DIEHVL+L+ +++  L    TEI DDE+   +
Sbjct: 182 STSSKSMHGMTEGSTGNCPVCRKVFHAKDIEHVLSLVGSHSSNLSSNGTEITDDEKLLHS 241

Query: 187 EVENIRR 207
           + E  RR
Sbjct: 242 DSELTRR 248


>emb|CBI16670.3| unnamed protein product [Vitis vinifera]
          Length = 355

 Score = 60.1 bits (144), Expect = 2e-07
 Identities = 29/61 (47%), Positives = 39/61 (63%)
 Frame = +1

Query: 25  MRGTEKENQGTCPVCRKVFQATDIEHVLNLIKTYTPELGLEETEIDDDEEFQCAEVENIR 204
           M G  + + G CPVCRKVF A DIEHVL+L+ +++  L    TEI DDE+   ++ E  R
Sbjct: 190 MHGMTEGSTGNCPVCRKVFHAKDIEHVLSLVGSHSSNLSSNGTEITDDEKLLHSDSELTR 249

Query: 205 R 207
           R
Sbjct: 250 R 250


>ref|XP_002302496.1| predicted protein [Populus trichocarpa] gi|222844222|gb|EEE81769.1|
           predicted protein [Populus trichocarpa]
          Length = 354

 Score = 55.8 bits (133), Expect = 3e-06
 Identities = 28/62 (45%), Positives = 37/62 (59%)
 Frame = +1

Query: 22  DMRGTEKENQGTCPVCRKVFQATDIEHVLNLIKTYTPELGLEETEIDDDEEFQCAEVENI 201
           D+ G  +E  G CPVCRKVF   D EHVL+L+ T   +L   E EI  +E+   ++ EN 
Sbjct: 192 DVHGVLEERMGDCPVCRKVFHVKDFEHVLDLVGTQASQLD-SEAEIKYEEKLLHSDSENF 250

Query: 202 RR 207
           RR
Sbjct: 251 RR 252


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