BLASTX nr result

ID: Coptis21_contig00006059 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00006059
         (1144 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004141886.1| PREDICTED: prolyl 4-hydroxylase subunit alph...   402   e-110
ref|XP_003608463.1| Prolyl 4-hydroxylase subunit alpha-1 [Medica...   402   e-110
ref|XP_004163837.1| PREDICTED: LOW QUALITY PROTEIN: prolyl 4-hyd...   400   e-109
gb|AFK40578.1| unknown [Medicago truncatula]                          398   e-108
gb|AFI41205.1| oxygenase protein, partial [Arabidopsis thaliana]      396   e-108

>ref|XP_004141886.1| PREDICTED: prolyl 4-hydroxylase subunit alpha-1-like [Cucumis
           sativus]
          Length = 294

 Score =  402 bits (1033), Expect = e-110
 Identities = 198/285 (69%), Positives = 234/285 (82%), Gaps = 6/285 (2%)
 Frame = +1

Query: 76  MKSKSYRS--SFRGKLSLP-IVFILCLAFFLAGFYGSIFLPYH---QSPRSRLLESLPDD 237
           MK KS RS  S R KL LP ++F+LCL  FLAGF+GS  L        PR+RLL+S  D 
Sbjct: 1   MKGKSGRSNWSLRSKLGLPALIFVLCLFCFLAGFFGSTLLSQDVDDDRPRARLLQSASDV 60

Query: 238 TEFESVPHGENGDPFTSSIPFQVLSWKPRTVFYPGFATPEQCETIIKRAKANLKPSSLAL 417
           TEF+ +  GENGD   SSIPFQVLSW+PR +++P FAT EQC++I+  AK  L+PS+LAL
Sbjct: 61  TEFDLMSSGENGDDSISSIPFQVLSWRPRALYFPKFATAEQCQSIVNLAKPKLRPSTLAL 120

Query: 418 RKGETAENTQGIRTSSGTFLSASEDKTGVLDLIEQKISRATMIPQSHGEAFNILRYEIGQ 597
           RKGETAE+T+G+RTSSG F SASED++G L +IE+KI+RATMIP++HGEA+NILRYEIGQ
Sbjct: 121 RKGETAESTKGVRTSSGVFFSASEDESGTLGVIEEKIARATMIPRTHGEAYNILRYEIGQ 180

Query: 598 RYLAHYDAFNPEEYGPQKSQRIASFLLYLSDVEEGGETKFPYENGSNMDINYDFQECIGL 777
           +Y +HYDAF P EYGPQKSQR+ASFLLYL+DVEEGGET FP+ENG NMD  Y+FQ CIGL
Sbjct: 181 KYNSHYDAFKPSEYGPQKSQRVASFLLYLTDVEEGGETMFPFENGLNMDGTYNFQTCIGL 240

Query: 778 KVKPRQGDGLLFYSLLPNGTIDQTSLHGSCPVITGEKWVATKWIR 912
           KVKPRQGDGLLFYS+ PNGTID TSLHGSCPVI G+KWVATKWIR
Sbjct: 241 KVKPRQGDGLLFYSVFPNGTIDPTSLHGSCPVIKGQKWVATKWIR 285


>ref|XP_003608463.1| Prolyl 4-hydroxylase subunit alpha-1 [Medicago truncatula]
           gi|355509518|gb|AES90660.1| Prolyl 4-hydroxylase subunit
           alpha-1 [Medicago truncatula]
          Length = 297

 Score =  402 bits (1033), Expect = e-110
 Identities = 199/284 (70%), Positives = 230/284 (80%), Gaps = 8/284 (2%)
 Frame = +1

Query: 85  KSYRSSFR-GKLSLPIVFILCLAFFLAGFYGSIFLPYHQS-------PRSRLLESLPDDT 240
           KS   S R  KL+ P VF++C+ FFLAGF+GS    + Q        PR RLL+S  + T
Sbjct: 7   KSSNWSLRTNKLTFPYVFLICIFFFLAGFFGSTLFSHSQDGDGYGLRPRPRLLDSTKE-T 65

Query: 241 EFESVPHGENGDPFTSSIPFQVLSWKPRTVFYPGFATPEQCETIIKRAKANLKPSSLALR 420
           E+  +  GE GD   +SIPFQVLSWKPR +++P FAT EQCE I+  AKA LKPSSLALR
Sbjct: 66  EYNLMTAGEFGDDSITSIPFQVLSWKPRALYFPNFATAEQCENIVSVAKAGLKPSSLALR 125

Query: 421 KGETAENTQGIRTSSGTFLSASEDKTGVLDLIEQKISRATMIPQSHGEAFNILRYEIGQR 600
           KGET ENT+GIRTSSG FLSAS DKT  L+ IE+KI+RATMIP+SHGEAFNILRYE+GQR
Sbjct: 126 KGETTENTKGIRTSSGVFLSASRDKTKTLEAIEEKIARATMIPRSHGEAFNILRYEVGQR 185

Query: 601 YLAHYDAFNPEEYGPQKSQRIASFLLYLSDVEEGGETKFPYENGSNMDINYDFQECIGLK 780
           Y +HYDAFNP+EYGPQKSQR+ASFLLYL+DVEEGGET FP+ENG NMD  Y +++C+GL+
Sbjct: 186 YNSHYDAFNPDEYGPQKSQRVASFLLYLTDVEEGGETMFPFENGLNMDGTYGYEDCVGLR 245

Query: 781 VKPRQGDGLLFYSLLPNGTIDQTSLHGSCPVITGEKWVATKWIR 912
           VKPRQGDGLLFYSLLPNGTIDQTSLHGSCPVI GEKWVATKWIR
Sbjct: 246 VKPRQGDGLLFYSLLPNGTIDQTSLHGSCPVIKGEKWVATKWIR 289


>ref|XP_004163837.1| PREDICTED: LOW QUALITY PROTEIN: prolyl 4-hydroxylase subunit
           alpha-1-like [Cucumis sativus]
          Length = 294

 Score =  400 bits (1029), Expect = e-109
 Identities = 197/285 (69%), Positives = 233/285 (81%), Gaps = 6/285 (2%)
 Frame = +1

Query: 76  MKSKSYRS--SFRGKLSLP-IVFILCLAFFLAGFYGSIFLPYH---QSPRSRLLESLPDD 237
           MK KS RS  S R KL LP ++F+LCL  FLAGF+GS  L        PR+RLL+S  D 
Sbjct: 1   MKGKSGRSNWSLRSKLGLPALIFVLCLFXFLAGFFGSTLLSQDVDDDRPRARLLQSASDV 60

Query: 238 TEFESVPHGENGDPFTSSIPFQVLSWKPRTVFYPGFATPEQCETIIKRAKANLKPSSLAL 417
           TEF+ +  GENGD   SSIPFQVLSW+PR +++P FAT EQC++I+  AK  L+PS+LAL
Sbjct: 61  TEFDLMSSGENGDDSISSIPFQVLSWRPRALYFPKFATAEQCQSIVNLAKPKLRPSTLAL 120

Query: 418 RKGETAENTQGIRTSSGTFLSASEDKTGVLDLIEQKISRATMIPQSHGEAFNILRYEIGQ 597
           RKGETAE+T+G+RTSSG F SASED++G L +IE+K +RATMIP++HGEA+NILRYEIGQ
Sbjct: 121 RKGETAESTKGVRTSSGVFFSASEDESGTLGVIEEKXARATMIPRTHGEAYNILRYEIGQ 180

Query: 598 RYLAHYDAFNPEEYGPQKSQRIASFLLYLSDVEEGGETKFPYENGSNMDINYDFQECIGL 777
           +Y +HYDAF P EYGPQKSQR+ASFLLYL+DVEEGGET FP+ENG NMD  Y+FQ CIGL
Sbjct: 181 KYNSHYDAFKPSEYGPQKSQRVASFLLYLTDVEEGGETMFPFENGLNMDGTYNFQTCIGL 240

Query: 778 KVKPRQGDGLLFYSLLPNGTIDQTSLHGSCPVITGEKWVATKWIR 912
           KVKPRQGDGLLFYS+ PNGTID TSLHGSCPVI G+KWVATKWIR
Sbjct: 241 KVKPRQGDGLLFYSVFPNGTIDPTSLHGSCPVIKGQKWVATKWIR 285


>gb|AFK40578.1| unknown [Medicago truncatula]
          Length = 297

 Score =  398 bits (1023), Expect = e-108
 Identities = 198/284 (69%), Positives = 229/284 (80%), Gaps = 8/284 (2%)
 Frame = +1

Query: 85  KSYRSSFR-GKLSLPIVFILCLAFFLAGFYGSIFLPYHQS-------PRSRLLESLPDDT 240
           KS   S R  KL+ P VF++C+ FFLAGF+GS    + Q        PR RLL+S  + T
Sbjct: 7   KSSNWSLRTNKLTFPYVFLICIFFFLAGFFGSTLFSHSQDGDGYGLRPRPRLLDSTKE-T 65

Query: 241 EFESVPHGENGDPFTSSIPFQVLSWKPRTVFYPGFATPEQCETIIKRAKANLKPSSLALR 420
           E+  +  GE GD   +SIPFQVLSWKPR +++P FAT EQCE I+  AKA LKPSSLALR
Sbjct: 66  EYNLMTAGEFGDDSITSIPFQVLSWKPRALYFPNFATAEQCENIVSVAKAGLKPSSLALR 125

Query: 421 KGETAENTQGIRTSSGTFLSASEDKTGVLDLIEQKISRATMIPQSHGEAFNILRYEIGQR 600
           KGET ENT+GIRTSSG FLSAS DKT  L+ IE+KI+RATMIP+SHGEAFNILRYE+GQR
Sbjct: 126 KGETTENTKGIRTSSGVFLSASRDKTKTLEAIEEKIARATMIPRSHGEAFNILRYEVGQR 185

Query: 601 YLAHYDAFNPEEYGPQKSQRIASFLLYLSDVEEGGETKFPYENGSNMDINYDFQECIGLK 780
           Y +HYDAFNP+EYGPQKSQR+ASFLLYL+DVEEGGET FP+ENG NMD  Y +++ +GL+
Sbjct: 186 YYSHYDAFNPDEYGPQKSQRVASFLLYLTDVEEGGETMFPFENGLNMDGTYGYEDRVGLR 245

Query: 781 VKPRQGDGLLFYSLLPNGTIDQTSLHGSCPVITGEKWVATKWIR 912
           VKPRQGDGLLFYSLLPNGTIDQTSLHGSCPVI GEKWVATKWIR
Sbjct: 246 VKPRQGDGLLFYSLLPNGTIDQTSLHGSCPVIKGEKWVATKWIR 289


>gb|AFI41205.1| oxygenase protein, partial [Arabidopsis thaliana]
          Length = 288

 Score =  396 bits (1017), Expect = e-108
 Identities = 197/285 (69%), Positives = 229/285 (80%), Gaps = 6/285 (2%)
 Frame = +1

Query: 76  MKS--KSYRSSFRGKLSLPIVFILCLAFFLAGFYGSIFLPYHQ---SPRSRLLESLPD-D 237
           MKS  KSYR   R KL L  V + C   FL GFYGS  L  +     PR R+LE + + +
Sbjct: 1   MKSRLKSYR---RKKLGLATVIVFCSLCFLFGFYGSTLLSQNVPRVKPRLRMLEMVENGE 57

Query: 238 TEFESVPHGENGDPFTSSIPFQVLSWKPRTVFYPGFATPEQCETIIKRAKANLKPSSLAL 417
            E  S+PHG  G+    SIPFQVLSW+PR +++P FAT EQC+ II+RAK NLKPS+LAL
Sbjct: 58  EEAGSMPHGVTGEESIGSIPFQVLSWRPRAIYFPNFATAEQCQAIIERAKVNLKPSALAL 117

Query: 418 RKGETAENTQGIRTSSGTFLSASEDKTGVLDLIEQKISRATMIPQSHGEAFNILRYEIGQ 597
           RKGETAENT+G RTSSGTF+SASE+ TG LD +E+KI+RATMIP+SHGE+FNILRYE+GQ
Sbjct: 118 RKGETAENTKGTRTSSGTFISASEESTGALDFVERKIARATMIPRSHGESFNILRYELGQ 177

Query: 598 RYLAHYDAFNPEEYGPQKSQRIASFLLYLSDVEEGGETKFPYENGSNMDINYDFQECIGL 777
           +Y +HYD FNP EYGPQ SQRIASFLLYLSDVEEGGET FP+ENGSNM I YD+++CIGL
Sbjct: 178 KYDSHYDVFNPTEYGPQSSQRIASFLLYLSDVEEGGETMFPFENGSNMGIGYDYKQCIGL 237

Query: 778 KVKPRQGDGLLFYSLLPNGTIDQTSLHGSCPVITGEKWVATKWIR 912
           KVKPR+GDGLLFYS+ PNGTIDQTSLHGSCPV  GEKWVATKWIR
Sbjct: 238 KVKPRKGDGLLFYSVFPNGTIDQTSLHGSCPVTKGEKWVATKWIR 282


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