BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00006053
         (1847 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002318715.1| predicted protein [Populus trichocarpa] gi|2...   330   6e-88
ref|XP_002511213.1| nucleolar protein nop56, putative [Ricinus c...   329   2e-87
ref|XP_004165830.1| PREDICTED: LOW QUALITY PROTEIN: nucleolar pr...   327   9e-87
ref|XP_004138057.1| PREDICTED: nucleolar protein 56-like [Cucumi...   327   9e-87
ref|XP_002283518.1| PREDICTED: nucleolar protein 56-like [Vitis ...   326   1e-86

>ref|XP_002318715.1| predicted protein [Populus trichocarpa] gi|222859388|gb|EEE96935.1|
            predicted protein [Populus trichocarpa]
          Length = 540

 Score =  330 bits (847), Expect = 6e-88
 Identities = 169/202 (83%), Positives = 184/202 (91%)
 Frame = +3

Query: 549  ITEATKASMRQDFSITELINVEQFAQRVMNLAEYRKRLHEYLVNKMNDIAPNLASLIGEI 728
            + EA KASM QD S  +LINV+QFAQRVM+L+EYRK+LHEYLV KMNDIAPNLASLIGE+
Sbjct: 247  VVEAAKASMGQDLSPIDLINVQQFAQRVMDLSEYRKKLHEYLVTKMNDIAPNLASLIGEM 306

Query: 729  VGARLISHAGSLTNLAKCPSSTLQILGAEKALFRALKTRGNTPKYGLIFHSSFIGRASQR 908
            VGARLISHAGSLTNLAKCPSSTLQILGAEKALFRALKTRGNTPKYGLIFHSSFIGRAS R
Sbjct: 307  VGARLISHAGSLTNLAKCPSSTLQILGAEKALFRALKTRGNTPKYGLIFHSSFIGRASAR 366

Query: 909  NKGRMARFLANKCSIASRIDCFSEGSTTVFGEKLREQVEERLDFYDKGIAPRKNIDMMKE 1088
            NKGRMAR+LANKCSIASRIDCF+E STTVFGEKLREQVEERLDFYDKG+APRKNID+MK 
Sbjct: 367  NKGRMARYLANKCSIASRIDCFAESSTTVFGEKLREQVEERLDFYDKGVAPRKNIDVMKA 426

Query: 1089 AIENVLSEGGEKTAMDVEEAPS 1154
            AI    S   + TAM++EEAP+
Sbjct: 427  AIG---SAENKDTAMEIEEAPA 445


>ref|XP_002511213.1| nucleolar protein nop56, putative [Ricinus communis]
            gi|223550328|gb|EEF51815.1| nucleolar protein nop56,
            putative [Ricinus communis]
          Length = 558

 Score =  329 bits (843), Expect = 2e-87
 Identities = 176/274 (64%), Positives = 202/274 (73%), Gaps = 7/274 (2%)
 Frame = +3

Query: 549  ITEATKASMRQDFSITELINVEQFAQRVMNLAEYRKRLHEYLVNKMNDIAPNLASLIGEI 728
            + EA KASM QD S  +LINV+QFAQRVM+L+EYRK+L++YLV KMNDIAPNLASLIGE+
Sbjct: 247  VVEAAKASMGQDLSPIDLINVQQFAQRVMDLSEYRKKLYDYLVTKMNDIAPNLASLIGEV 306

Query: 729  VGARLISHAGSLTNLAKCPSSTLQILGAEKALFRALKTRGNTPKYGLIFHSSFIGRASQR 908
            VGARLISHAGSLTNLAKCPSSTLQILGAEKALFRALKTRGNTPKYGLIFHSSFIGRAS R
Sbjct: 307  VGARLISHAGSLTNLAKCPSSTLQILGAEKALFRALKTRGNTPKYGLIFHSSFIGRASAR 366

Query: 909  NKGRMARFLANKCSIASRIDCFSEGSTTVFGEKLREQVEERLDFYDKGIAPRKNIDMMKE 1088
            NKGRMAR+LANKCSIASRIDCFS+  TT+FGEKLREQVEERLDFYDKG+APRKNID+MK 
Sbjct: 367  NKGRMARYLANKCSIASRIDCFSDNGTTIFGEKLREQVEERLDFYDKGVAPRKNIDVMKA 426

Query: 1089 AIENVLSEGGEKTAMDVEEAPSTXXXXXXXXXXET-----PVSDGEPNGVTNGGA--SXX 1247
            AIE+  ++  +    +V   PST          E       V++ +P    N  A     
Sbjct: 427  AIESAENKEDDMETEEVSPVPSTKKSKKKKSKSEAAEDGEDVAEDKPTVAANEEALEDAK 486

Query: 1248 XXXXXXXXXXXXXXDARSAAKSNGVNDFESEGDG 1349
                            ++  KSNGVN  ++E DG
Sbjct: 487  SEKKKKKKEKRKLEQEQAVEKSNGVNGVDAEQDG 520


>ref|XP_004165830.1| PREDICTED: LOW QUALITY PROTEIN: nucleolar protein 56-like [Cucumis
            sativus]
          Length = 552

 Score =  327 bits (837), Expect = 9e-87
 Identities = 172/232 (74%), Positives = 190/232 (81%), Gaps = 4/232 (1%)
 Frame = +3

Query: 549  ITEATKASMRQDFSITELINVEQFAQRVMNLAEYRKRLHEYLVNKMNDIAPNLASLIGEI 728
            I EA KASM QD S  +LINV+QFAQRVM+L++YRK+L++YLV KMNDIAPNLASLIGE+
Sbjct: 248  IVEAAKASMGQDLSDIDLINVQQFAQRVMDLSDYRKKLYDYLVTKMNDIAPNLASLIGEV 307

Query: 729  VGARLISHAGSLTNLAKCPSSTLQILGAEKALFRALKTRGNTPKYGLIFHSSFIGRASQR 908
            VGARLISHAGSLTNLAKCPSSTLQILGAEKALFRALKT+GNTPKYGLIFHSSFIGRAS R
Sbjct: 308  VGARLISHAGSLTNLAKCPSSTLQILGAEKALFRALKTKGNTPKYGLIFHSSFIGRASAR 367

Query: 909  NKGRMARFLANKCSIASRIDCFSEGSTTVFGEKLREQVEERLDFYDKGIAPRKNIDMMKE 1088
            NKGRMAR+LANKCSIA+RIDCF+E STT FGEKLREQVEERLDFYDKGIAPRKNID+MK 
Sbjct: 368  NKGRMARYLANKCSIATRIDCFAESSTTTFGEKLREQVEERLDFYDKGIAPRKNIDVMKA 427

Query: 1089 AIENVLSEGGEKTAMDVEEAPSTXXXXXXXXXXETPVSDGE----PNGVTNG 1232
            AIE   S   + T MDVEE PS               ++GE    P+   NG
Sbjct: 428  AIE---SADNKATDMDVEEVPSEASGKKSKKKKSKSNANGEVEDRPSATANG 476


>ref|XP_004138057.1| PREDICTED: nucleolar protein 56-like [Cucumis sativus]
          Length = 552

 Score =  327 bits (837), Expect = 9e-87
 Identities = 172/232 (74%), Positives = 190/232 (81%), Gaps = 4/232 (1%)
 Frame = +3

Query: 549  ITEATKASMRQDFSITELINVEQFAQRVMNLAEYRKRLHEYLVNKMNDIAPNLASLIGEI 728
            I EA KASM QD S  +LINV+QFAQRVM+L++YRK+L++YLV KMNDIAPNLASLIGE+
Sbjct: 248  IVEAAKASMGQDLSDIDLINVQQFAQRVMDLSDYRKKLYDYLVTKMNDIAPNLASLIGEV 307

Query: 729  VGARLISHAGSLTNLAKCPSSTLQILGAEKALFRALKTRGNTPKYGLIFHSSFIGRASQR 908
            VGARLISHAGSLTNLAKCPSSTLQILGAEKALFRALKT+GNTPKYGLIFHSSFIGRAS R
Sbjct: 308  VGARLISHAGSLTNLAKCPSSTLQILGAEKALFRALKTKGNTPKYGLIFHSSFIGRASAR 367

Query: 909  NKGRMARFLANKCSIASRIDCFSEGSTTVFGEKLREQVEERLDFYDKGIAPRKNIDMMKE 1088
            NKGRMAR+LANKCSIA+RIDCF+E STT FGEKLREQVEERLDFYDKGIAPRKNID+MK 
Sbjct: 368  NKGRMARYLANKCSIATRIDCFAESSTTTFGEKLREQVEERLDFYDKGIAPRKNIDVMKA 427

Query: 1089 AIENVLSEGGEKTAMDVEEAPSTXXXXXXXXXXETPVSDGE----PNGVTNG 1232
            AIE   S   + T MDVEE PS               ++GE    P+   NG
Sbjct: 428  AIE---SADNKATDMDVEEVPSEASGKKSKKKKSKSNANGEVEDRPSATANG 476


>ref|XP_002283518.1| PREDICTED: nucleolar protein 56-like [Vitis vinifera]
          Length = 558

 Score =  326 bits (836), Expect = 1e-86
 Identities = 172/233 (73%), Positives = 189/233 (81%), Gaps = 2/233 (0%)
 Frame = +3

Query: 549  ITEATKASMRQDFSITELINVEQFAQRVMNLAEYRKRLHEYLVNKMNDIAPNLASLIGEI 728
            I EA KASM QD S  +LINV+QFAQRVM+L+EYRK+L+EYLV KMNDIAPNLASLIGE+
Sbjct: 247  IVEAAKASMGQDLSPIDLINVQQFAQRVMDLSEYRKKLYEYLVTKMNDIAPNLASLIGEV 306

Query: 729  VGARLISHAGSLTNLAKCPSSTLQILGAEKALFRALKTRGNTPKYGLIFHSSFIGRASQR 908
            VGARLISHAGSLTNLAKCPSSTLQILGAEKALFRALKTRGNTPKYGLIFHSSFIGRAS R
Sbjct: 307  VGARLISHAGSLTNLAKCPSSTLQILGAEKALFRALKTRGNTPKYGLIFHSSFIGRASAR 366

Query: 909  NKGRMARFLANKCSIASRIDCFSEGSTTVFGEKLREQVEERLDFYDKGIAPRKNIDMMKE 1088
            NKGRMAR+LANKCSIASRIDCF+E +TTVFGEKLREQVEERL+FYDKGIAPRKNID+MK 
Sbjct: 367  NKGRMARYLANKCSIASRIDCFAESNTTVFGEKLREQVEERLEFYDKGIAPRKNIDVMKA 426

Query: 1089 AIENVLSEGGEKTAMDVEEAPSTXXXXXXXXXXE--TPVSDGEPNGVTNGGAS 1241
            AIE   +   E  A     A  +          E   P+ + +P   TNG AS
Sbjct: 427  AIEITQNNDTEDKATTEPSAKKSKKKKSKVEAAEDGEPMVEDKPTAATNGDAS 479