BLASTX nr result

ID: Coptis21_contig00006051 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00006051
         (265 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003632840.1| PREDICTED: putative disease resistance prote...    74   1e-11
emb|CBI36394.3| unnamed protein product [Vitis vinifera]               72   6e-11
ref|XP_002269044.2| PREDICTED: putative disease resistance prote...    71   1e-10
emb|CAN79463.1| hypothetical protein VITISV_000507 [Vitis vinifera]    70   1e-10
ref|XP_002321815.1| cc-nbs-lrr resistance protein [Populus trich...    67   2e-09

>ref|XP_003632840.1| PREDICTED: putative disease resistance protein RGA4-like [Vitis
           vinifera]
          Length = 903

 Score = 73.9 bits (180), Expect = 1e-11
 Identities = 42/82 (51%), Positives = 52/82 (63%), Gaps = 4/82 (4%)
 Frame = +2

Query: 32  SIYEAKNLRTLVAR----SSKSVPSAKLFHHLTCLRMLDLSGDFDREVLPSEVSRLLHLR 199
           S Y  KNL TL+A+    SS  V    L  HLTCLR LDLS +   E LP EV +L+HLR
Sbjct: 526 STYNMKNLHTLLAKEAFKSSVLVALPNLLRHLTCLRALDLSSNQLIEELPKEVGKLIHLR 585

Query: 200 YLDLSNNLYLKELPETVRSLVN 265
           +L+LS   +L+ELPET+  L N
Sbjct: 586 FLNLSGCFWLRELPETICDLYN 607


>emb|CBI36394.3| unnamed protein product [Vitis vinifera]
          Length = 613

 Score = 71.6 bits (174), Expect = 6e-11
 Identities = 42/84 (50%), Positives = 55/84 (65%), Gaps = 6/84 (7%)
 Frame = +2

Query: 32  SIYEAKNLRTLVARSS------KSVPSAKLFHHLTCLRMLDLSGDFDREVLPSEVSRLLH 193
           S Y  KNL TL+A+ +      K++P+  L  HLTCL+ LDLS +   E LP EV +L+H
Sbjct: 230 STYNMKNLHTLLAKEAFNSRVFKALPN--LLRHLTCLKALDLSSNQLIEELPREVGKLIH 287

Query: 194 LRYLDLSNNLYLKELPETVRSLVN 265
           LRYL+LS  L L+ELPET+  L N
Sbjct: 288 LRYLNLSLCLSLRELPETICDLYN 311


>ref|XP_002269044.2| PREDICTED: putative disease resistance protein RGA4-like [Vitis
           vinifera]
          Length = 919

 Score = 70.9 bits (172), Expect = 1e-10
 Identities = 39/73 (53%), Positives = 48/73 (65%)
 Frame = +2

Query: 47  KNLRTLVARSSKSVPSAKLFHHLTCLRMLDLSGDFDREVLPSEVSRLLHLRYLDLSNNLY 226
           KNL TL+A+S+      +   HLTCLR LDLS +   E LP EV +L+HLRYLDLS    
Sbjct: 553 KNLHTLLAKSAFDSRVLEALGHLTCLRALDLSWNQLIEELPKEVGKLIHLRYLDLSRCQS 612

Query: 227 LKELPETVRSLVN 265
           L+ELPET+  L N
Sbjct: 613 LRELPETICDLYN 625


>emb|CAN79463.1| hypothetical protein VITISV_000507 [Vitis vinifera]
          Length = 970

 Score = 70.5 bits (171), Expect = 1e-10
 Identities = 38/82 (46%), Positives = 52/82 (63%), Gaps = 4/82 (4%)
 Frame = +2

Query: 32  SIYEAKNLRTLVAR----SSKSVPSAKLFHHLTCLRMLDLSGDFDREVLPSEVSRLLHLR 199
           S Y+ KNLRTL+      SS       LF HLTCLR+LDL+ +  R+ LP  + +L+HL+
Sbjct: 575 STYKMKNLRTLLLEFAVVSSIDEALPNLFQHLTCLRVLDLARNLSRKELPKAIEKLIHLK 634

Query: 200 YLDLSNNLYLKELPETVRSLVN 265
           YL+LS+   L+ELPE +  L N
Sbjct: 635 YLNLSHCHELRELPEAICDLYN 656


>ref|XP_002321815.1| cc-nbs-lrr resistance protein [Populus trichocarpa]
           gi|222868811|gb|EEF05942.1| cc-nbs-lrr resistance
           protein [Populus trichocarpa]
          Length = 987

 Score = 67.0 bits (162), Expect = 2e-09
 Identities = 41/82 (50%), Positives = 51/82 (62%), Gaps = 4/82 (4%)
 Frame = +2

Query: 32  SIYEAKNLRTLVARSSK----SVPSAKLFHHLTCLRMLDLSGDFDREVLPSEVSRLLHLR 199
           SIY+A  LR+L+ RS      S P  +L   LT LR+ DLS     E+ PS+V +LLHLR
Sbjct: 574 SIYKAGKLRSLLIRSFNDTAISKPLLELLRKLTYLRLFDLSASQIEEI-PSDVGKLLHLR 632

Query: 200 YLDLSNNLYLKELPETVRSLVN 265
           YLD S   +LKELPET+  L N
Sbjct: 633 YLDFSYCKWLKELPETISDLYN 654


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