BLASTX nr result

ID: Coptis21_contig00006002 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00006002
         (714 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002266382.1| PREDICTED: vesicle transport protein USE1 [V...   228   7e-58
emb|CAN68312.1| hypothetical protein VITISV_028548 [Vitis vinifera]   227   2e-57
emb|CBI30101.3| unnamed protein product [Vitis vinifera]              212   7e-53
ref|XP_002267440.1| PREDICTED: vesicle transport protein USE1 [V...   212   7e-53
emb|CBI39241.3| unnamed protein product [Vitis vinifera]              206   5e-51

>ref|XP_002266382.1| PREDICTED: vesicle transport protein USE1 [Vitis vinifera]
           gi|297735435|emb|CBI17875.3| unnamed protein product
           [Vitis vinifera]
          Length = 240

 Score =  228 bits (582), Expect = 7e-58
 Identities = 124/201 (61%), Positives = 147/201 (73%), Gaps = 3/201 (1%)
 Frame = -3

Query: 712 LVAETTPEGLPRISKAKEKDYXXXXXXXXXXXXXXXSMPRYS-ETVDVTGDEQIASTTEE 536
           L  E T EGLPR+SK K  +Y               S  + S E    T  ++  S TEE
Sbjct: 40  LTEERTLEGLPRVSKPKVNEYSEKIEAIASKIGSPSSNVQVSQEPFSGTSGKEGTSKTEE 99

Query: 535 KTYSP--PVLRRRLVSHPKVEDVNHEITEADPSAPVKLDDAAHSHIEKHRKLQDDLTDEM 362
           + + P  P LRRR V   K ED +H+  +AD S PVKLD AA +HIEKHRKLQ+DLTDEM
Sbjct: 100 EDHMPLSPGLRRRFVPASKFEDRSHDTIKADASGPVKLDAAAQAHIEKHRKLQEDLTDEM 159

Query: 361 VGLARQLKESSLMMNQSLQDTEKLLDSTEKAVEHSLASTGHANTRAMEIYSRSFKTTCFT 182
           VGLA+QLK+SSL+M+QS+Q+TEK+LDSTEKAVEHSLASTGH NTRAM+IYS SFKTTCFT
Sbjct: 160 VGLAKQLKQSSLLMSQSIQNTEKILDSTEKAVEHSLASTGHVNTRAMDIYSNSFKTTCFT 219

Query: 181 WLLIFIMTCIFIMVVLLIRVT 119
           W++IF+MTCIFIMVVLLIRVT
Sbjct: 220 WIMIFVMTCIFIMVVLLIRVT 240


>emb|CAN68312.1| hypothetical protein VITISV_028548 [Vitis vinifera]
          Length = 240

 Score =  227 bits (579), Expect = 2e-57
 Identities = 123/201 (61%), Positives = 147/201 (73%), Gaps = 3/201 (1%)
 Frame = -3

Query: 712 LVAETTPEGLPRISKAKEKDYXXXXXXXXXXXXXXXSMPRYS-ETVDVTGDEQIASTTEE 536
           L  E T EGLPR+SK K  +Y               S  + S E    T  ++  S TEE
Sbjct: 40  LTEERTLEGLPRVSKPKVNEYSEKIEAIASKITAPSSNVQVSQEPFSGTSGKEGTSKTEE 99

Query: 535 KTYSP--PVLRRRLVSHPKVEDVNHEITEADPSAPVKLDDAAHSHIEKHRKLQDDLTDEM 362
           + + P  P LR+R V   K ED +H+  +AD S PVKLD AA +HIEKHRKLQ+DLTDEM
Sbjct: 100 EDHMPLSPGLRKRFVPASKFEDRSHDXIKADASGPVKLDAAAQAHIEKHRKLQEDLTDEM 159

Query: 361 VGLARQLKESSLMMNQSLQDTEKLLDSTEKAVEHSLASTGHANTRAMEIYSRSFKTTCFT 182
           VGLA+QLK+SSL+M+QS+Q+TEK+LDSTEKAVEHSLASTGH NTRAM+IYS SFKTTCFT
Sbjct: 160 VGLAKQLKQSSLLMSQSIQNTEKILDSTEKAVEHSLASTGHVNTRAMDIYSNSFKTTCFT 219

Query: 181 WLLIFIMTCIFIMVVLLIRVT 119
           W++IF+MTCIFIMVVLLIRVT
Sbjct: 220 WIMIFVMTCIFIMVVLLIRVT 240


>emb|CBI30101.3| unnamed protein product [Vitis vinifera]
          Length = 299

 Score =  212 bits (539), Expect = 7e-53
 Identities = 115/200 (57%), Positives = 137/200 (68%), Gaps = 2/200 (1%)
 Frame = -3

Query: 712 LVAETTPEGLPRISKAKEKDYXXXXXXXXXXXXXXXSMPRYSETV--DVTGDEQIASTTE 539
           L  E T EGLPR+SK K  +Y               S  + S+       G E  +   E
Sbjct: 100 LTEERTLEGLPRVSKQKVNEYAEEIEAIASKIIAPSSDVQVSQEPLSGTYGQESHSKDEE 159

Query: 538 EKTYSPPVLRRRLVSHPKVEDVNHEITEADPSAPVKLDDAAHSHIEKHRKLQDDLTDEMV 359
           +     P LRRR V    VED  H+  +AD S PVKLD AA +H+EKHRKLQ+DLTDEMV
Sbjct: 160 DSIPHSPGLRRRFVPASNVEDRTHDTVKADASGPVKLDAAAQAHVEKHRKLQEDLTDEMV 219

Query: 358 GLARQLKESSLMMNQSLQDTEKLLDSTEKAVEHSLASTGHANTRAMEIYSRSFKTTCFTW 179
           GLA+QLK+ SL+M+QS++++EK+LDSTEKAVEHSLASTG  NTRAMEI S  FKTTCFTW
Sbjct: 220 GLAKQLKQGSLLMSQSIKNSEKILDSTEKAVEHSLASTGRVNTRAMEINSNGFKTTCFTW 279

Query: 178 LLIFIMTCIFIMVVLLIRVT 119
           +LIF+MTCIFIMVVLLIRVT
Sbjct: 280 ILIFVMTCIFIMVVLLIRVT 299


>ref|XP_002267440.1| PREDICTED: vesicle transport protein USE1 [Vitis vinifera]
          Length = 239

 Score =  212 bits (539), Expect = 7e-53
 Identities = 115/200 (57%), Positives = 137/200 (68%), Gaps = 2/200 (1%)
 Frame = -3

Query: 712 LVAETTPEGLPRISKAKEKDYXXXXXXXXXXXXXXXSMPRYSETV--DVTGDEQIASTTE 539
           L  E T EGLPR+SK K  +Y               S  + S+       G E  +   E
Sbjct: 40  LTEERTLEGLPRVSKQKVNEYAEEIEAIASKIIAPSSDVQVSQEPLSGTYGQESHSKDEE 99

Query: 538 EKTYSPPVLRRRLVSHPKVEDVNHEITEADPSAPVKLDDAAHSHIEKHRKLQDDLTDEMV 359
           +     P LRRR V    VED  H+  +AD S PVKLD AA +H+EKHRKLQ+DLTDEMV
Sbjct: 100 DSIPHSPGLRRRFVPASNVEDRTHDTVKADASGPVKLDAAAQAHVEKHRKLQEDLTDEMV 159

Query: 358 GLARQLKESSLMMNQSLQDTEKLLDSTEKAVEHSLASTGHANTRAMEIYSRSFKTTCFTW 179
           GLA+QLK+ SL+M+QS++++EK+LDSTEKAVEHSLASTG  NTRAMEI S  FKTTCFTW
Sbjct: 160 GLAKQLKQGSLLMSQSIKNSEKILDSTEKAVEHSLASTGRVNTRAMEINSNGFKTTCFTW 219

Query: 178 LLIFIMTCIFIMVVLLIRVT 119
           +LIF+MTCIFIMVVLLIRVT
Sbjct: 220 ILIFVMTCIFIMVVLLIRVT 239


>emb|CBI39241.3| unnamed protein product [Vitis vinifera]
          Length = 239

 Score =  206 bits (523), Expect = 5e-51
 Identities = 114/200 (57%), Positives = 135/200 (67%), Gaps = 2/200 (1%)
 Frame = -3

Query: 712 LVAETTPEGLPRISKAKEKDYXXXXXXXXXXXXXXXSMPRYSETV--DVTGDEQIASTTE 539
           L  E T EGLPR+SK K  +Y               S  + S+       G E  +   E
Sbjct: 40  LSEERTLEGLPRVSKQKVNEYAEEIEAMASKIIAPSSDVQVSQEPLSGTYGQEGHSKEGE 99

Query: 538 EKTYSPPVLRRRLVSHPKVEDVNHEITEADPSAPVKLDDAAHSHIEKHRKLQDDLTDEMV 359
           +     P LRRR V    VED  H+  +AD   PVKLD AA +HIEKHRKLQ+DLTDEMV
Sbjct: 100 DSIPHSPGLRRRFVPASNVEDRTHDTVKADTLGPVKLDVAAQAHIEKHRKLQEDLTDEMV 159

Query: 358 GLARQLKESSLMMNQSLQDTEKLLDSTEKAVEHSLASTGHANTRAMEIYSRSFKTTCFTW 179
           GLA+QLK+ SL+M+QS++++EK+LDSTEKAVEHSLASTG  NTRAMEI S  FKTTCFTW
Sbjct: 160 GLAKQLKQGSLLMSQSIENSEKILDSTEKAVEHSLASTGRVNTRAMEINSNGFKTTCFTW 219

Query: 178 LLIFIMTCIFIMVVLLIRVT 119
           +LIF+M CIFIMVVLLIRVT
Sbjct: 220 ILIFVMMCIFIMVVLLIRVT 239


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