BLASTX nr result

ID: Coptis21_contig00005993 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00005993
         (793 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002321138.1| predicted protein [Populus trichocarpa] gi|2...   186   7e-45
ref|XP_002278573.1| PREDICTED: uncharacterized membrane protein ...   184   3e-44
ref|XP_002317329.1| predicted protein [Populus trichocarpa] gi|2...   182   1e-43
gb|AFK40201.1| unknown [Lotus japonicus]                              180   4e-43
ref|XP_002529338.1| conserved hypothetical protein [Ricinus comm...   180   4e-43

>ref|XP_002321138.1| predicted protein [Populus trichocarpa] gi|222861911|gb|EEE99453.1|
           predicted protein [Populus trichocarpa]
          Length = 179

 Score =  186 bits (471), Expect = 7e-45
 Identities = 92/121 (76%), Positives = 100/121 (82%)
 Frame = -2

Query: 597 TTWYKEKRWDSKRMLGSGGMPSSHSATVTALSVAIGLQDGXXXXXXXXXXXXXXXVMYDA 418
           TTWYKEKRWDSKRML SGGMPSSHSATVTAL+VA+GLQ+G               VMYDA
Sbjct: 58  TTWYKEKRWDSKRMLDSGGMPSSHSATVTALAVAVGLQEGTGSPAFAIVVVLACVVMYDA 117

Query: 417 SGVRLHAGRQAEVLNQIVCELPTEHPLSNVRPLRELLGHTPLQVVAGAILGCLVAYLLGN 238
           SGVRLHAGRQAE+LNQIVCE P EHPLS+ RPLRELLGHTPLQVVAGAILGC+V YL+ N
Sbjct: 118 SGVRLHAGRQAELLNQIVCEFPPEHPLSSSRPLRELLGHTPLQVVAGAILGCIVGYLMRN 177

Query: 237 S 235
           +
Sbjct: 178 T 178


>ref|XP_002278573.1| PREDICTED: uncharacterized membrane protein yuiD [Vitis vinifera]
           gi|297737478|emb|CBI26679.3| unnamed protein product
           [Vitis vinifera]
          Length = 166

 Score =  184 bits (466), Expect = 3e-44
 Identities = 89/118 (75%), Positives = 100/118 (84%)
 Frame = -2

Query: 597 TTWYKEKRWDSKRMLGSGGMPSSHSATVTALSVAIGLQDGXXXXXXXXXXXXXXXVMYDA 418
           TTWYKEKRWDS+RMLGSGGMPSSHSATVTAL+VAIG Q+G               VMYDA
Sbjct: 47  TTWYKEKRWDSRRMLGSGGMPSSHSATVTALAVAIGFQEGTGGSAFAIAVVLACVVMYDA 106

Query: 417 SGVRLHAGRQAEVLNQIVCELPTEHPLSNVRPLRELLGHTPLQVVAGAILGCLVAYLL 244
           SGVRLHAGRQAE+LNQIVCELP +HP+SNVRPLR+ LGHTPLQVVAG++LGC+VAYL+
Sbjct: 107 SGVRLHAGRQAELLNQIVCELPPDHPVSNVRPLRDSLGHTPLQVVAGSVLGCVVAYLM 164


>ref|XP_002317329.1| predicted protein [Populus trichocarpa] gi|222860394|gb|EEE97941.1|
           predicted protein [Populus trichocarpa]
          Length = 168

 Score =  182 bits (461), Expect = 1e-43
 Identities = 87/121 (71%), Positives = 102/121 (84%)
 Frame = -2

Query: 597 TTWYKEKRWDSKRMLGSGGMPSSHSATVTALSVAIGLQDGXXXXXXXXXXXXXXXVMYDA 418
           TTW+KEKRWD++RMLGSGGMPSSHSATVTAL+ AIGLQ+G               VMYDA
Sbjct: 47  TTWFKEKRWDARRMLGSGGMPSSHSATVTALATAIGLQEGTGAPAFAVALVLACVVMYDA 106

Query: 417 SGVRLHAGRQAEVLNQIVCELPTEHPLSNVRPLRELLGHTPLQVVAGAILGCLVAYLLGN 238
           +GVRLHAGRQAE+LNQIVCELP EHP+SNVRPLR+ LGHTPLQVVAGA+LGC++A+L+ +
Sbjct: 107 TGVRLHAGRQAELLNQIVCELPPEHPVSNVRPLRDSLGHTPLQVVAGAVLGCIIAFLMRS 166

Query: 237 S 235
           S
Sbjct: 167 S 167


>gb|AFK40201.1| unknown [Lotus japonicus]
          Length = 169

 Score =  180 bits (456), Expect = 4e-43
 Identities = 88/121 (72%), Positives = 100/121 (82%)
 Frame = -2

Query: 597 TTWYKEKRWDSKRMLGSGGMPSSHSATVTALSVAIGLQDGXXXXXXXXXXXXXXXVMYDA 418
           TTWYKEKRWDSKRML SGGMPSSHSATV+AL++AIGLQ+G               VMYDA
Sbjct: 48  TTWYKEKRWDSKRMLDSGGMPSSHSATVSALALAIGLQEGAGSPAFAIAVVLSCIVMYDA 107

Query: 417 SGVRLHAGRQAEVLNQIVCELPTEHPLSNVRPLRELLGHTPLQVVAGAILGCLVAYLLGN 238
           SGVRLHAGRQAE+LNQIVCELP EHPLS VRPLR+ LGHTPLQVVAG +LGC++A+L+ +
Sbjct: 108 SGVRLHAGRQAELLNQIVCELPPEHPLSTVRPLRDSLGHTPLQVVAGGLLGCIIAFLMRS 167

Query: 237 S 235
           S
Sbjct: 168 S 168


>ref|XP_002529338.1| conserved hypothetical protein [Ricinus communis]
           gi|223531209|gb|EEF33055.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 173

 Score =  180 bits (456), Expect = 4e-43
 Identities = 87/121 (71%), Positives = 100/121 (82%)
 Frame = -2

Query: 597 TTWYKEKRWDSKRMLGSGGMPSSHSATVTALSVAIGLQDGXXXXXXXXXXXXXXXVMYDA 418
           T WYKE+RWDSK+M  SGGMPSSHSATVTAL++AIGLQ+G               VMYDA
Sbjct: 52  TNWYKERRWDSKKMFDSGGMPSSHSATVTALAMAIGLQEGPGSPAFAIAFVLACVVMYDA 111

Query: 417 SGVRLHAGRQAEVLNQIVCELPTEHPLSNVRPLRELLGHTPLQVVAGAILGCLVAYLLGN 238
           +GVRLHAGRQAE+LNQIVCE P EHPLS+VRPLRELLGHTPLQVVAG++LGC+VAYL+ N
Sbjct: 112 TGVRLHAGRQAELLNQIVCEFPPEHPLSSVRPLRELLGHTPLQVVAGSLLGCIVAYLMRN 171

Query: 237 S 235
           +
Sbjct: 172 T 172