BLASTX nr result

ID: Coptis21_contig00005967 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00005967
         (1096 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

dbj|BAK61816.1| conserved oligomeric Golgi complex component [Ci...   338   1e-90
ref|XP_004141327.1| PREDICTED: conserved oligomeric Golgi comple...   337   3e-90
ref|XP_002308543.1| predicted protein [Populus trichocarpa] gi|2...   336   5e-90
ref|XP_002279909.2| PREDICTED: conserved oligomeric Golgi comple...   332   1e-88
ref|XP_002516094.1| Conserved oligomeric Golgi complex component...   330   5e-88

>dbj|BAK61816.1| conserved oligomeric Golgi complex component [Citrus unshiu]
          Length = 568

 Score =  338 bits (867), Expect = 1e-90
 Identities = 169/247 (68%), Positives = 199/247 (80%)
 Frame = +2

Query: 2    YCAMGLGSVGLDFRGLLPPLFEDAVHNLFLKNMCTAVENFQIVLDSYRWVPLPAVGFPSN 181
            YCAMGLG VGLDFRGLLPPLFE+AV  LF KNM TAVENFQ+VLDS+RWVPLPAVG+P++
Sbjct: 325  YCAMGLGWVGLDFRGLLPPLFEEAVLKLFSKNMSTAVENFQLVLDSHRWVPLPAVGYPAH 384

Query: 182  GSTDESQEDVTPPSSLMEHPPLAVFVNGVSAAMNELRPCAPLSLKHVLAQEVVKGLQAVS 361
               +ESQEDVTPPS LMEHPPLAVF+NGVSAAMNELRPCAPLSLKHVLA+E++KGLQAVS
Sbjct: 385  SVGEESQEDVTPPSYLMEHPPLAVFINGVSAAMNELRPCAPLSLKHVLAEELIKGLQAVS 444

Query: 362  DSLLRYNATRMLRPNESVLFLSLCRAFIEVVCPHCTTCFGRCYPGGATLIMDLQSSFNGV 541
            DSLLRY+ TRMLR NES LFLSLCRAFIEV  PHC TCFGRCYPGGA LIMD +S ++G+
Sbjct: 445  DSLLRYSTTRMLRENESGLFLSLCRAFIEVAYPHCATCFGRCYPGGAALIMDAKSLYDGL 504

Query: 542  ARLLAVSPAKELPKRADSAEERHIIENGGDATTMDNGSSPPAEQVGTPSPDSIMQDSTAQ 721
             RL   SP++ELPK  + A+ + I EN GD   ++NG +P AE+    + D   ++   Q
Sbjct: 505  GRLSTHSPSRELPKPVNDADGKTITEN-GDLPVVENGVNPAAEETEGTNVDE--KEQPLQ 561

Query: 722  TNEEQRD 742
            T E+  +
Sbjct: 562  TEEKPEE 568


>ref|XP_004141327.1| PREDICTED: conserved oligomeric Golgi complex subunit 8-like [Cucumis
            sativus] gi|449525202|ref|XP_004169607.1| PREDICTED:
            conserved oligomeric Golgi complex subunit 8-like
            [Cucumis sativus]
          Length = 570

 Score =  337 bits (864), Expect = 3e-90
 Identities = 166/247 (67%), Positives = 198/247 (80%)
 Frame = +2

Query: 2    YCAMGLGSVGLDFRGLLPPLFEDAVHNLFLKNMCTAVENFQIVLDSYRWVPLPAVGFPSN 181
            YCAMGLG VG+DFRGLLPPLFE+AV NLF KNM TAV+NFQ+VLDS+RWVPLPAVGFP++
Sbjct: 325  YCAMGLGWVGMDFRGLLPPLFEEAVLNLFSKNMATAVDNFQLVLDSHRWVPLPAVGFPAS 384

Query: 182  GSTDESQEDVTPPSSLMEHPPLAVFVNGVSAAMNELRPCAPLSLKHVLAQEVVKGLQAVS 361
               +ESQEDVTPPS LMEHPPLAVFVNGVSAAMNELR CAPLSLK V+AQE++KGLQAVS
Sbjct: 385  TIGEESQEDVTPPSYLMEHPPLAVFVNGVSAAMNELRHCAPLSLKQVIAQELIKGLQAVS 444

Query: 362  DSLLRYNATRMLRPNESVLFLSLCRAFIEVVCPHCTTCFGRCYPGGATLIMDLQSSFNGV 541
            DSLLRYN TRML+ NES LFL LCRAFIEV  PHC TCFGRCYPGGA LI+D ++ ++G+
Sbjct: 445  DSLLRYNTTRMLKDNESGLFLQLCRAFIEVAYPHCATCFGRCYPGGAMLILDAKNLYDGI 504

Query: 542  ARLLAVSPAKELPKRADSAEERHIIENGGDATTMDNGSSPPAEQVGTPSPDSIMQDSTAQ 721
             RLL VS ++ELPK   +AEE+ I EN G+   ++NG +  A++    SP  I  +  ++
Sbjct: 505  GRLLTVSSSRELPKTVSNAEEKTITEN-GEMPALENGGTSDADKEDQKSPSLISNEKHSE 563

Query: 722  TNEEQRD 742
               EQ +
Sbjct: 564  GEAEQNN 570


>ref|XP_002308543.1| predicted protein [Populus trichocarpa] gi|222854519|gb|EEE92066.1|
            predicted protein [Populus trichocarpa]
          Length = 575

 Score =  336 bits (862), Expect = 5e-90
 Identities = 174/249 (69%), Positives = 200/249 (80%), Gaps = 1/249 (0%)
 Frame = +2

Query: 2    YCAMGLGSVGLDFRGLLPPLFEDAVHNLFLKNMCTAVENFQIVLDSYRWVPLPAVGFPSN 181
            YCA+GL  VGLDFRGLLPPLFE+AV NLF KNM TAVENFQ+VLDS+RWVPLPAVGFPS 
Sbjct: 325  YCAVGLNWVGLDFRGLLPPLFEEAVLNLFSKNMNTAVENFQLVLDSHRWVPLPAVGFPSY 384

Query: 182  GSTDESQEDVTPPSSLMEHPPLAVFVNGVSAAMNELRPCAPLSLKHVLAQEVVKGLQAVS 361
               +E QEDVTPPS LMEHPPLAVF+NGVSAAMNELRPCAP+SLKHVLAQE++KGLQAVS
Sbjct: 385  SIGEEQQEDVTPPSYLMEHPPLAVFINGVSAAMNELRPCAPVSLKHVLAQELIKGLQAVS 444

Query: 362  DSLLRYNATRMLRPNESVLFLSLCRAFIEVVCPHCTTCFGRCYPGGATLIMDLQSSFNGV 541
            DSLLRYNATRMLR NES LFLSLCR+FIEV  PHC TCFGRCYPGGA LIMD ++ ++GV
Sbjct: 445  DSLLRYNATRMLRDNESGLFLSLCRSFIEVAYPHCATCFGRCYPGGAALIMDAKNLYDGV 504

Query: 542  ARLLAVSPAKELPKRADSAEERHIIENGGDATTMDNGSSPPAEQVGTPSPDSIMQDS-TA 718
             RLLA S ++EL + A++ E + I EN GD   ++NG +P  E  G    D   Q S T 
Sbjct: 505  GRLLATS-SRELQRPANNTEGKKITEN-GDQLVVENGVTPEVEPSGVAIADEKDQISPTV 562

Query: 719  QTNEEQRDT 745
            Q +E+Q D+
Sbjct: 563  QIDEKQGDS 571


>ref|XP_002279909.2| PREDICTED: conserved oligomeric Golgi complex subunit 8-like [Vitis
            vinifera] gi|296081667|emb|CBI20672.3| unnamed protein
            product [Vitis vinifera]
          Length = 571

 Score =  332 bits (850), Expect = 1e-88
 Identities = 164/248 (66%), Positives = 193/248 (77%), Gaps = 1/248 (0%)
 Frame = +2

Query: 2    YCAMGLGSVGLDFRGLLPPLFEDAVHNLFLKNMCTAVENFQIVLDSYRWVPLPAVGFPSN 181
            YCAMGLG VGLDFRGLLP LFE+AV NLF KNM TA+ENFQ+VLDS+RWVPLPAVGFPS 
Sbjct: 323  YCAMGLGWVGLDFRGLLPSLFEEAVLNLFSKNMNTAIENFQLVLDSHRWVPLPAVGFPSG 382

Query: 182  GSTDESQEDVTPPSSLMEHPPLAVFVNGVSAAMNELRPCAPLSLKHVLAQEVVKGLQAVS 361
            G  +E++EDVTPPS LMEHPPLAVFVNGVSAAMNELRPCAP+SLKHVLAQE++ GL+AVS
Sbjct: 383  GVGEETREDVTPPSYLMEHPPLAVFVNGVSAAMNELRPCAPISLKHVLAQELINGLRAVS 442

Query: 362  DSLLRYNATRMLRPNESVLFLSLCRAFIEVVCPHCTTCFGRCYPGGATLIMDLQSSFNGV 541
            +SLLRYNA+RMLR NES+LFLSLCRAFIEV  PHC TCFGRCYPGGA LIMD ++ ++G+
Sbjct: 443  NSLLRYNASRMLRENESLLFLSLCRAFIEVAYPHCATCFGRCYPGGAALIMDAKNLYDGI 502

Query: 542  ARLLAVSPAKELPKRADSAEERHI-IENGGDATTMDNGSSPPAEQVGTPSPDSIMQDSTA 718
              LLAVS ++ELPK   + EE  + +   G+    +NG  P  EQ      D   ++   
Sbjct: 503  GNLLAVSASRELPKSVTTTEENSVTVTENGNLPNEENGVMPETEQALNGKVDEEEENDLT 562

Query: 719  QTNEEQRD 742
               E+  D
Sbjct: 563  SLTEKPAD 570


>ref|XP_002516094.1| Conserved oligomeric Golgi complex component, putative [Ricinus
            communis] gi|223544580|gb|EEF46096.1| Conserved
            oligomeric Golgi complex component, putative [Ricinus
            communis]
          Length = 574

 Score =  330 bits (845), Expect = 5e-88
 Identities = 173/258 (67%), Positives = 204/258 (79%)
 Frame = +2

Query: 2    YCAMGLGSVGLDFRGLLPPLFEDAVHNLFLKNMCTAVENFQIVLDSYRWVPLPAVGFPSN 181
            YCAMGL  VGLDFRGLLP LFE+AV NLF KNM TAVENFQ+VLDS+RWVPLPAVGFP+N
Sbjct: 323  YCAMGLCWVGLDFRGLLPSLFEEAVLNLFSKNMSTAVENFQLVLDSHRWVPLPAVGFPTN 382

Query: 182  GSTDESQEDVTPPSSLMEHPPLAVFVNGVSAAMNELRPCAPLSLKHVLAQEVVKGLQAVS 361
              ++E+QEDVTPPS LMEH PLAVFVNGVSAAMNELRPCAPLSLK VLAQE++KGL+AVS
Sbjct: 383  SVSEENQEDVTPPSYLMEHTPLAVFVNGVSAAMNELRPCAPLSLKFVLAQELIKGLKAVS 442

Query: 362  DSLLRYNATRMLRPNESVLFLSLCRAFIEVVCPHCTTCFGRCYPGGATLIMDLQSSFNGV 541
            DSLLRYNATRMLR NES LFLSLCRAFIEV  PHC TCFGRCY GG  LIMD ++ ++G+
Sbjct: 443  DSLLRYNATRMLRENESGLFLSLCRAFIEVAYPHCATCFGRCYSGGTALIMDAKNLYDGI 502

Query: 542  ARLLAVSPAKELPKRADSAEERHIIENGGDATTMDNGSSPPAEQVGTPSPDSIMQDSTAQ 721
            +RLLA SP++ELP+  ++ EE+ I EN G+   ++N  S   EQ   P P    Q   A 
Sbjct: 503  SRLLATSPSRELPRPVNNPEEKSITEN-GNLPVVENEVSTDVEQ---PQP----QGMNAA 554

Query: 722  TNEEQRDTKS*SIKIDSQ 775
            T+E+++  KS +I  D +
Sbjct: 555  TDEKEQ--KSPTIPTDEK 570


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