BLASTX nr result

ID: Coptis21_contig00005961 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00005961
         (310 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002314881.1| predicted membrane protein [Populus trichoca...   114   6e-24
gb|AFK33910.1| unknown [Lotus japonicus]                              114   8e-24
ref|XP_002529148.1| Transmembrane protein TPARL, putative [Ricin...   114   8e-24
gb|AFK38913.1| unknown [Medicago truncatula]                          113   1e-23
ref|XP_003555888.1| PREDICTED: uncharacterized protein LOC100527...   112   3e-23

>ref|XP_002314881.1| predicted membrane protein [Populus trichocarpa]
           gi|222863921|gb|EEF01052.1| predicted membrane protein
           [Populus trichocarpa]
          Length = 228

 Score =  114 bits (286), Expect = 6e-24
 Identities = 57/60 (95%), Positives = 60/60 (100%)
 Frame = +2

Query: 131 QGFTKSLAMTVLSEIGDKTFFAAAILAMRHPRRLVLAGCLAALIVMTILSALLGWAAPNL 310
           QGFTKSLAMTVLSEIGDKTFFAAAILAMRHPRRLVL+GCLAALIVMTILSA++GWAAPNL
Sbjct: 6   QGFTKSLAMTVLSEIGDKTFFAAAILAMRHPRRLVLSGCLAALIVMTILSAIVGWAAPNL 65


>gb|AFK33910.1| unknown [Lotus japonicus]
          Length = 229

 Score =  114 bits (285), Expect = 8e-24
 Identities = 57/60 (95%), Positives = 60/60 (100%)
 Frame = +2

Query: 131 QGFTKSLAMTVLSEIGDKTFFAAAILAMRHPRRLVLAGCLAALIVMTILSALLGWAAPNL 310
           QGFTKSLAMTVLSEIGDKTFFAAAILAMRHPRRLVL+GCL+ALIVMTILSAL+GWAAPNL
Sbjct: 6   QGFTKSLAMTVLSEIGDKTFFAAAILAMRHPRRLVLSGCLSALIVMTILSALVGWAAPNL 65


>ref|XP_002529148.1| Transmembrane protein TPARL, putative [Ricinus communis]
           gi|223531427|gb|EEF33261.1| Transmembrane protein TPARL,
           putative [Ricinus communis]
          Length = 228

 Score =  114 bits (285), Expect = 8e-24
 Identities = 57/60 (95%), Positives = 60/60 (100%)
 Frame = +2

Query: 131 QGFTKSLAMTVLSEIGDKTFFAAAILAMRHPRRLVLAGCLAALIVMTILSALLGWAAPNL 310
           QGFTKSLAMTVLSEIGDKTFFAAAILAMRHPRRLVL+GCLAALIVMTILSA++GWAAPNL
Sbjct: 6   QGFTKSLAMTVLSEIGDKTFFAAAILAMRHPRRLVLSGCLAALIVMTILSAVVGWAAPNL 65


>gb|AFK38913.1| unknown [Medicago truncatula]
          Length = 227

 Score =  113 bits (283), Expect = 1e-23
 Identities = 57/60 (95%), Positives = 58/60 (96%)
 Frame = +2

Query: 131 QGFTKSLAMTVLSEIGDKTFFAAAILAMRHPRRLVLAGCLAALIVMTILSALLGWAAPNL 310
           QGFTKSLAMTVLSEIGDKTFFAAAILAMRHPRRLVL GCLAALIVMTILS L+GWAAPNL
Sbjct: 6   QGFTKSLAMTVLSEIGDKTFFAAAILAMRHPRRLVLTGCLAALIVMTILSVLVGWAAPNL 65


>ref|XP_003555888.1| PREDICTED: uncharacterized protein LOC100527757 [Glycine max]
          Length = 229

 Score =  112 bits (280), Expect = 3e-23
 Identities = 55/60 (91%), Positives = 59/60 (98%)
 Frame = +2

Query: 131 QGFTKSLAMTVLSEIGDKTFFAAAILAMRHPRRLVLAGCLAALIVMTILSALLGWAAPNL 310
           QGFTKSLAMT+LSEIGDKTFFAAAILAMRHPRRLVL+GCL+ALIVMTILS L+GWAAPNL
Sbjct: 6   QGFTKSLAMTILSEIGDKTFFAAAILAMRHPRRLVLSGCLSALIVMTILSVLVGWAAPNL 65


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