BLASTX nr result
ID: Coptis21_contig00005946
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Coptis21_contig00005946
(1838 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002264221.2| PREDICTED: elongation factor G, chloroplasti... 986 0.0
ref|XP_002509581.1| translation elongation factor G, putative [R... 981 0.0
ref|NP_564801.1| elongation factor EF-G [Arabidopsis thaliana] g... 973 0.0
gb|AAK64040.1| unknown protein [Arabidopsis thaliana] 973 0.0
ref|XP_004147612.1| PREDICTED: elongation factor G, chloroplasti... 972 0.0
>ref|XP_002264221.2| PREDICTED: elongation factor G, chloroplastic-like [Vitis vinifera]
Length = 775
Score = 986 bits (2550), Expect = 0.0
Identities = 494/554 (89%), Positives = 522/554 (94%)
Frame = -3
Query: 1806 FFRTRDMIVTNLGAKPLVLQIPIGAEDSFRGVIDLVRMQAILWSGEELGATFVYEDIPDD 1627
FFRTRDMIVTNLGAKPLV+Q+PIGAED+FRGVIDLV+MQA+LWSGEELGA F Y+DIP D
Sbjct: 222 FFRTRDMIVTNLGAKPLVIQLPIGAEDNFRGVIDLVKMQAVLWSGEELGAKFAYDDIPSD 281
Query: 1626 LQDLADEYRMQMIETIVELDDKAMEGYLEGVEPDEQTIKALVRKGTITGSFVPVLCGSAF 1447
L +LA +YR QMIETIVELDD+AMEGYLEGVEPDE+TIK L+RKGTI+ SFVPVLCGSAF
Sbjct: 282 LLELAQDYRSQMIETIVELDDEAMEGYLEGVEPDEETIKKLIRKGTISASFVPVLCGSAF 341
Query: 1446 KNKGVQPLLDAVVDYLPSPLDVPPMKGTDPDNPEVTILRSPSDEEPFAGLAFKIMSDSFV 1267
KNKGVQPLLDAVVDYLPSPLD+P MKGTDP+NPEVT+ R+ SDEEPFAGLAFKIMSD FV
Sbjct: 342 KNKGVQPLLDAVVDYLPSPLDLPAMKGTDPENPEVTVERAASDEEPFAGLAFKIMSDPFV 401
Query: 1266 GSLTFVRVYAGKLSAGSYVLNANKGKKERIGRLLEMHANSREDVKVXXXXXXXXXXXLKD 1087
GSLTFVRVYAGKL+AGSYVLNANKGKKERIGRLLEMHANSREDVKV LKD
Sbjct: 402 GSLTFVRVYAGKLAAGSYVLNANKGKKERIGRLLEMHANSREDVKVALAGDIVALAGLKD 461
Query: 1086 TITGETLCDPEKPIVLERMDFPDPVIKVAIEPKTKADIDKMAVGLIKLAQEDPSFHFSRD 907
TITGETLCDPE PIVLERMDFPDPVIKVAIEPKTKAD+DKMA GL+KLAQEDPSFHFSRD
Sbjct: 462 TITGETLCDPENPIVLERMDFPDPVIKVAIEPKTKADVDKMASGLVKLAQEDPSFHFSRD 521
Query: 906 EEINQTVIEGMGELHLEIIVDRLKREYKVEANVGAPQVNYRESISKVSEVKYIHKKQSGG 727
EEINQTVIEGMGELHLEIIVDRLKRE+KVEANVGAPQVNYRESISKVSEVKY+HKKQSGG
Sbjct: 522 EEINQTVIEGMGELHLEIIVDRLKREFKVEANVGAPQVNYRESISKVSEVKYVHKKQSGG 581
Query: 726 QGQFADITVRFEPLEPGSGYEFKSEIKGGAVPKEYIPGVMKGLEECMSNGVLAGFPVVDV 547
QGQFADITVRFEP+E GSGYEFKSEIKGGAVPKEYIPGVMKGLEECMSNGVLAGFPVVDV
Sbjct: 582 QGQFADITVRFEPIEAGSGYEFKSEIKGGAVPKEYIPGVMKGLEECMSNGVLAGFPVVDV 641
Query: 546 RAALTDGSYHDVDSSVLAFQLAARGAFREGMKRAGPKMLEPIMKVEVVTPEEHLGDVIGD 367
RA L DGSYHDVDSSVLAFQLAARGAFREGM++A PKMLEPIMKVEVVTPEEHLGDVIGD
Sbjct: 642 RAVLVDGSYHDVDSSVLAFQLAARGAFREGMRKAAPKMLEPIMKVEVVTPEEHLGDVIGD 701
Query: 366 LNSRRGQINNFEDKPGGLKVVDALVPLAEMFQYVSTLRGMTKGRASYTMQLAKFDVVPQH 187
LNSRRGQIN+F DKPGGLKVVDALVPLAEMFQYVSTLRGMTKGRASYTMQLAKF+VVPQH
Sbjct: 702 LNSRRGQINSFGDKPGGLKVVDALVPLAEMFQYVSTLRGMTKGRASYTMQLAKFEVVPQH 761
Query: 186 IQNQLATKDQPVAA 145
IQN+LA K+Q VAA
Sbjct: 762 IQNELAAKEQAVAA 775
>ref|XP_002509581.1| translation elongation factor G, putative [Ricinus communis]
gi|223549480|gb|EEF50968.1| translation elongation factor
G, putative [Ricinus communis]
Length = 789
Score = 981 bits (2536), Expect = 0.0
Identities = 491/554 (88%), Positives = 521/554 (94%)
Frame = -3
Query: 1806 FFRTRDMIVTNLGAKPLVLQIPIGAEDSFRGVIDLVRMQAILWSGEELGATFVYEDIPDD 1627
FFRTRDMI+TNLGAKPLV+QIP+GAED+F+GV+DLV+M+AILWSGEELGA F Y++IP D
Sbjct: 236 FFRTRDMIITNLGAKPLVIQIPVGAEDNFQGVVDLVKMKAILWSGEELGAKFAYDNIPAD 295
Query: 1626 LQDLADEYRMQMIETIVELDDKAMEGYLEGVEPDEQTIKALVRKGTITGSFVPVLCGSAF 1447
LQDLA+EYR Q+IETIVELDD AME YLEGVEPDE+TIK L+RKGTI SFVPVLCGSAF
Sbjct: 296 LQDLAEEYRAQLIETIVELDDDAMEKYLEGVEPDEETIKKLIRKGTIGSSFVPVLCGSAF 355
Query: 1446 KNKGVQPLLDAVVDYLPSPLDVPPMKGTDPDNPEVTILRSPSDEEPFAGLAFKIMSDSFV 1267
KNKGVQPLLDAVVDYLPSPLD+P MKGTDP+NPEVTI R+ SD+EPFAGLAFKIMSD FV
Sbjct: 356 KNKGVQPLLDAVVDYLPSPLDLPAMKGTDPENPEVTIERTASDDEPFAGLAFKIMSDPFV 415
Query: 1266 GSLTFVRVYAGKLSAGSYVLNANKGKKERIGRLLEMHANSREDVKVXXXXXXXXXXXLKD 1087
GSLTFVRVY GKL+AGSYVLNANKGKKERIGRLLEMHANSREDVKV LKD
Sbjct: 416 GSLTFVRVYGGKLTAGSYVLNANKGKKERIGRLLEMHANSREDVKVALAGDIVALAGLKD 475
Query: 1086 TITGETLCDPEKPIVLERMDFPDPVIKVAIEPKTKADIDKMAVGLIKLAQEDPSFHFSRD 907
TITGETLCDP+ PIVLERMDFPDPVIKVAIEPKTKAD+DKMA GLIKLAQEDPSFHFSRD
Sbjct: 476 TITGETLCDPDNPIVLERMDFPDPVIKVAIEPKTKADVDKMANGLIKLAQEDPSFHFSRD 535
Query: 906 EEINQTVIEGMGELHLEIIVDRLKREYKVEANVGAPQVNYRESISKVSEVKYIHKKQSGG 727
EEINQTVIEGMGELHLEIIVDRLKRE+KVEANVGAPQVNYRESISKVSEVKY+HKKQSGG
Sbjct: 536 EEINQTVIEGMGELHLEIIVDRLKREFKVEANVGAPQVNYRESISKVSEVKYVHKKQSGG 595
Query: 726 QGQFADITVRFEPLEPGSGYEFKSEIKGGAVPKEYIPGVMKGLEECMSNGVLAGFPVVDV 547
QGQFADIT+RFEP+EPGSGYEFKSEIKGGAVP+EYIPGVMKGLEECM+NGVLAGFPVVDV
Sbjct: 596 QGQFADITMRFEPMEPGSGYEFKSEIKGGAVPREYIPGVMKGLEECMNNGVLAGFPVVDV 655
Query: 546 RAALTDGSYHDVDSSVLAFQLAARGAFREGMKRAGPKMLEPIMKVEVVTPEEHLGDVIGD 367
RA L DGSYHDVDSSVLAFQLAARGAFR+GMKRAGPKMLEPIMKVEVVTPEEHLGDVIGD
Sbjct: 656 RAVLVDGSYHDVDSSVLAFQLAARGAFRDGMKRAGPKMLEPIMKVEVVTPEEHLGDVIGD 715
Query: 366 LNSRRGQINNFEDKPGGLKVVDALVPLAEMFQYVSTLRGMTKGRASYTMQLAKFDVVPQH 187
LNSRRGQIN+F DKPGGLKVVDALVPLAEMFQYVSTLRGMTKGRASYTM LAKFDVVPQH
Sbjct: 716 LNSRRGQINSFGDKPGGLKVVDALVPLAEMFQYVSTLRGMTKGRASYTMHLAKFDVVPQH 775
Query: 186 IQNQLATKDQPVAA 145
IQNQLA K+Q VAA
Sbjct: 776 IQNQLAAKEQEVAA 789
>ref|NP_564801.1| elongation factor EF-G [Arabidopsis thaliana]
gi|6630460|gb|AAF19548.1|AC007190_16 F23N19.11
[Arabidopsis thaliana] gi|23297147|gb|AAN13104.1| unknown
protein [Arabidopsis thaliana]
gi|90855593|tpg|DAA05753.1| TPA_exp: elongation factor G
[Arabidopsis thaliana] gi|332195879|gb|AEE34000.1|
elongation factor EF-G [Arabidopsis thaliana]
Length = 783
Score = 973 bits (2515), Expect = 0.0
Identities = 484/554 (87%), Positives = 517/554 (93%)
Frame = -3
Query: 1806 FFRTRDMIVTNLGAKPLVLQIPIGAEDSFRGVIDLVRMQAILWSGEELGATFVYEDIPDD 1627
FFRTRDMIVTNLGAKPLVLQIPIGAED F+GV+DLVRM+AI+WSGEELGA F YEDIP+D
Sbjct: 230 FFRTRDMIVTNLGAKPLVLQIPIGAEDVFKGVVDLVRMKAIVWSGEELGAKFSYEDIPED 289
Query: 1626 LQDLADEYRMQMIETIVELDDKAMEGYLEGVEPDEQTIKALVRKGTITGSFVPVLCGSAF 1447
L+DLA EYR M+E IV+LDD+ ME YLEGVEPDE T+K LVRKGTITG FVP+LCGSAF
Sbjct: 290 LEDLAQEYRAAMMELIVDLDDEVMENYLEGVEPDEATVKRLVRKGTITGKFVPILCGSAF 349
Query: 1446 KNKGVQPLLDAVVDYLPSPLDVPPMKGTDPDNPEVTILRSPSDEEPFAGLAFKIMSDSFV 1267
KNKGVQPLLDAVVDYLPSP++VPPM GTDP+NPE+TI+R P D+EPFAGLAFKIMSD FV
Sbjct: 350 KNKGVQPLLDAVVDYLPSPVEVPPMNGTDPENPEITIIRKPDDDEPFAGLAFKIMSDPFV 409
Query: 1266 GSLTFVRVYAGKLSAGSYVLNANKGKKERIGRLLEMHANSREDVKVXXXXXXXXXXXLKD 1087
GSLTFVRVY+GK+SAGSYVLNANKGKKERIGRLLEMHANSREDVKV LKD
Sbjct: 410 GSLTFVRVYSGKISAGSYVLNANKGKKERIGRLLEMHANSREDVKVALTGDIIALAGLKD 469
Query: 1086 TITGETLCDPEKPIVLERMDFPDPVIKVAIEPKTKADIDKMAVGLIKLAQEDPSFHFSRD 907
TITGETL DPE P+VLERMDFPDPVIKVAIEPKTKADIDKMA GLIKLAQEDPSFHFSRD
Sbjct: 470 TITGETLSDPENPVVLERMDFPDPVIKVAIEPKTKADIDKMATGLIKLAQEDPSFHFSRD 529
Query: 906 EEINQTVIEGMGELHLEIIVDRLKREYKVEANVGAPQVNYRESISKVSEVKYIHKKQSGG 727
EE+NQTVIEGMGELHLEIIVDRLKRE+KVEANVGAPQVNYRESISK++EVKY HKKQSGG
Sbjct: 530 EEMNQTVIEGMGELHLEIIVDRLKREFKVEANVGAPQVNYRESISKIAEVKYTHKKQSGG 589
Query: 726 QGQFADITVRFEPLEPGSGYEFKSEIKGGAVPKEYIPGVMKGLEECMSNGVLAGFPVVDV 547
QGQFADITVRFEPLE GSGYEFKSEIKGGAVP+EYIPGVMKGLEECMS GVLAGFPVVDV
Sbjct: 590 QGQFADITVRFEPLEAGSGYEFKSEIKGGAVPREYIPGVMKGLEECMSTGVLAGFPVVDV 649
Query: 546 RAALTDGSYHDVDSSVLAFQLAARGAFREGMKRAGPKMLEPIMKVEVVTPEEHLGDVIGD 367
RA L DGSYHDVDSSVLAFQLAARGAFREGM++AGP+MLEPIM+VEVVTPEEHLGDVIGD
Sbjct: 650 RACLVDGSYHDVDSSVLAFQLAARGAFREGMRKAGPRMLEPIMRVEVVTPEEHLGDVIGD 709
Query: 366 LNSRRGQINNFEDKPGGLKVVDALVPLAEMFQYVSTLRGMTKGRASYTMQLAKFDVVPQH 187
LNSRRGQIN+F DKPGGLKVVD+LVPLAEMFQYVSTLRGMTKGRASYTMQLAKFDVVPQH
Sbjct: 710 LNSRRGQINSFGDKPGGLKVVDSLVPLAEMFQYVSTLRGMTKGRASYTMQLAKFDVVPQH 769
Query: 186 IQNQLATKDQPVAA 145
IQNQL++KDQ VAA
Sbjct: 770 IQNQLSSKDQEVAA 783
>gb|AAK64040.1| unknown protein [Arabidopsis thaliana]
Length = 783
Score = 973 bits (2515), Expect = 0.0
Identities = 484/554 (87%), Positives = 517/554 (93%)
Frame = -3
Query: 1806 FFRTRDMIVTNLGAKPLVLQIPIGAEDSFRGVIDLVRMQAILWSGEELGATFVYEDIPDD 1627
FFRTRDMIVTNLGAKPLVLQIPIGAED F+GV+DLVRM+AI+WSGEELGA F YEDIP+D
Sbjct: 230 FFRTRDMIVTNLGAKPLVLQIPIGAEDVFKGVVDLVRMKAIVWSGEELGAKFSYEDIPED 289
Query: 1626 LQDLADEYRMQMIETIVELDDKAMEGYLEGVEPDEQTIKALVRKGTITGSFVPVLCGSAF 1447
L+DLA EYR M+E IV+LDD+ ME YLEGVEPDE T+K LVRKGTITG FVP+LCGSAF
Sbjct: 290 LEDLAQEYRAAMMELIVDLDDEVMENYLEGVEPDEATVKRLVRKGTITGKFVPILCGSAF 349
Query: 1446 KNKGVQPLLDAVVDYLPSPLDVPPMKGTDPDNPEVTILRSPSDEEPFAGLAFKIMSDSFV 1267
KNKGVQPLLDAVVDYLPSP++VPPM GTDP+NPE+TI+R P D+EPFAGLAFKIMSD FV
Sbjct: 350 KNKGVQPLLDAVVDYLPSPVEVPPMNGTDPENPEITIIRKPDDDEPFAGLAFKIMSDPFV 409
Query: 1266 GSLTFVRVYAGKLSAGSYVLNANKGKKERIGRLLEMHANSREDVKVXXXXXXXXXXXLKD 1087
GSLTFVRVY+GK+SAGSYVLNANKGKKERIGRLLEMHANSREDVKV LKD
Sbjct: 410 GSLTFVRVYSGKISAGSYVLNANKGKKERIGRLLEMHANSREDVKVALTGDIIALAGLKD 469
Query: 1086 TITGETLCDPEKPIVLERMDFPDPVIKVAIEPKTKADIDKMAVGLIKLAQEDPSFHFSRD 907
TITGETL DPE P+VLERMDFPDPVIKVAIEPKTKADIDKMA GLIKLAQEDPSFHFSRD
Sbjct: 470 TITGETLSDPENPVVLERMDFPDPVIKVAIEPKTKADIDKMATGLIKLAQEDPSFHFSRD 529
Query: 906 EEINQTVIEGMGELHLEIIVDRLKREYKVEANVGAPQVNYRESISKVSEVKYIHKKQSGG 727
EE+NQTVIEGMGELHLEIIVDRLKRE+KVEANVGAPQVNYRESISK++EVKY HKKQSGG
Sbjct: 530 EEMNQTVIEGMGELHLEIIVDRLKREFKVEANVGAPQVNYRESISKIAEVKYTHKKQSGG 589
Query: 726 QGQFADITVRFEPLEPGSGYEFKSEIKGGAVPKEYIPGVMKGLEECMSNGVLAGFPVVDV 547
QGQFADITVRFEPLE GSGYEFKSEIKGGAVP+EYIPGVMKGLEECMS GVLAGFPVVDV
Sbjct: 590 QGQFADITVRFEPLEAGSGYEFKSEIKGGAVPREYIPGVMKGLEECMSTGVLAGFPVVDV 649
Query: 546 RAALTDGSYHDVDSSVLAFQLAARGAFREGMKRAGPKMLEPIMKVEVVTPEEHLGDVIGD 367
RA L DGSYHDVDSSVLAFQLAARGAFREGM++AGP+MLEPIM+VEVVTPEEHLGDVIGD
Sbjct: 650 RACLVDGSYHDVDSSVLAFQLAARGAFREGMRKAGPRMLEPIMRVEVVTPEEHLGDVIGD 709
Query: 366 LNSRRGQINNFEDKPGGLKVVDALVPLAEMFQYVSTLRGMTKGRASYTMQLAKFDVVPQH 187
LNSRRGQIN+F DKPGGLKVVD+LVPLAEMFQYVSTLRGMTKGRASYTMQLAKFDVVPQH
Sbjct: 710 LNSRRGQINSFGDKPGGLKVVDSLVPLAEMFQYVSTLRGMTKGRASYTMQLAKFDVVPQH 769
Query: 186 IQNQLATKDQPVAA 145
IQNQL++KDQ VAA
Sbjct: 770 IQNQLSSKDQEVAA 783
>ref|XP_004147612.1| PREDICTED: elongation factor G, chloroplastic-like [Cucumis sativus]
Length = 777
Score = 972 bits (2512), Expect = 0.0
Identities = 482/554 (87%), Positives = 519/554 (93%)
Frame = -3
Query: 1806 FFRTRDMIVTNLGAKPLVLQIPIGAEDSFRGVIDLVRMQAILWSGEELGATFVYEDIPDD 1627
FFRTRDMIVTNLGAKPLVLQ+PIG+ED+F+GV+DLVRM+AI+WSGEELGA F YEDIP+D
Sbjct: 224 FFRTRDMIVTNLGAKPLVLQLPIGSEDNFKGVVDLVRMKAIVWSGEELGAKFQYEDIPED 283
Query: 1626 LQDLADEYRMQMIETIVELDDKAMEGYLEGVEPDEQTIKALVRKGTITGSFVPVLCGSAF 1447
L DLA +YR QMIET+VELDD+AME YLEG+EPDE TIK L+RKG I+ FVPVLCGSAF
Sbjct: 284 LVDLAQDYRSQMIETVVELDDEAMENYLEGIEPDEATIKKLIRKGAISACFVPVLCGSAF 343
Query: 1446 KNKGVQPLLDAVVDYLPSPLDVPPMKGTDPDNPEVTILRSPSDEEPFAGLAFKIMSDSFV 1267
KNKGVQPLLDAVVDYLPSP+D+PPMKGTDP+NPE+ + R SD+EPF+GLAFKIMSD FV
Sbjct: 344 KNKGVQPLLDAVVDYLPSPIDLPPMKGTDPENPELIVERVASDDEPFSGLAFKIMSDPFV 403
Query: 1266 GSLTFVRVYAGKLSAGSYVLNANKGKKERIGRLLEMHANSREDVKVXXXXXXXXXXXLKD 1087
GSLTFVRVYAGKLSAGSYV+N+NKGKKERIGRLLEMHANSREDVKV LKD
Sbjct: 404 GSLTFVRVYAGKLSAGSYVMNSNKGKKERIGRLLEMHANSREDVKVALAGDIVALAGLKD 463
Query: 1086 TITGETLCDPEKPIVLERMDFPDPVIKVAIEPKTKADIDKMAVGLIKLAQEDPSFHFSRD 907
TITGETLCDP+ PIVLERMDFPDPVIKVAIEPKTKAD+DKMA GLIKLAQEDPSFHFSRD
Sbjct: 464 TITGETLCDPDHPIVLERMDFPDPVIKVAIEPKTKADVDKMATGLIKLAQEDPSFHFSRD 523
Query: 906 EEINQTVIEGMGELHLEIIVDRLKREYKVEANVGAPQVNYRESISKVSEVKYIHKKQSGG 727
EEINQTVIEGMGELHLEIIVDRLKRE+KVEANVGAPQVNYRESISK+SEVKY+HKKQSGG
Sbjct: 524 EEINQTVIEGMGELHLEIIVDRLKREFKVEANVGAPQVNYRESISKISEVKYVHKKQSGG 583
Query: 726 QGQFADITVRFEPLEPGSGYEFKSEIKGGAVPKEYIPGVMKGLEECMSNGVLAGFPVVDV 547
QGQFADITVRFEP+E GSGYEFKSEIKGGAVPKEYIPGV+KGLEECMSNGVLAGFPVVDV
Sbjct: 584 QGQFADITVRFEPMEAGSGYEFKSEIKGGAVPKEYIPGVVKGLEECMSNGVLAGFPVVDV 643
Query: 546 RAALTDGSYHDVDSSVLAFQLAARGAFREGMKRAGPKMLEPIMKVEVVTPEEHLGDVIGD 367
RA L DG+YHDVDSSVLAFQLAARGAFREGM++AGP+MLEPIMKVEVVTPEEHLGDVIGD
Sbjct: 644 RAVLVDGTYHDVDSSVLAFQLAARGAFREGMRKAGPRMLEPIMKVEVVTPEEHLGDVIGD 703
Query: 366 LNSRRGQINNFEDKPGGLKVVDALVPLAEMFQYVSTLRGMTKGRASYTMQLAKFDVVPQH 187
LNSRRGQIN+F DKPGGLKVVDALVPLAEMFQYVSTLRGMTKGRASYTMQLAKFDVVPQH
Sbjct: 704 LNSRRGQINSFGDKPGGLKVVDALVPLAEMFQYVSTLRGMTKGRASYTMQLAKFDVVPQH 763
Query: 186 IQNQLATKDQPVAA 145
IQN+LA K+Q VAA
Sbjct: 764 IQNELAAKEQEVAA 777