BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00005944
         (1301 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002278566.1| PREDICTED: diaminopimelate epimerase, chloro...   476   e-132
emb|CBI32677.3| unnamed protein product [Vitis vinifera]              467   e-129
ref|XP_002533003.1| Diaminopimelate epimerase, putative [Ricinus...   466   e-129
ref|NP_190926.1| diaminopimelate epimerase [Arabidopsis thaliana...   460   e-127
ref|XP_004142088.1| PREDICTED: diaminopimelate epimerase, chloro...   457   e-126

>ref|XP_002278566.1| PREDICTED: diaminopimelate epimerase, chloroplastic [Vitis vinifera]
          Length = 370

 Score =  476 bits (1224), Expect = e-132
 Identities = 231/318 (72%), Positives = 265/318 (83%)
 Frame = -1

Query: 1181 PTFRISASSSMSIETTPVKESTPLFLEQRASKFLHFVKYQGLGNDFILVDNLDSLEPKVT 1002
            P FR+SA+S MSIE    K S   FL+++ S FLHFVKY GLGNDFILVDN DS EPK+T
Sbjct: 55   PNFRVSATS-MSIEALE-KGSQTSFLDRKESGFLHFVKYHGLGNDFILVDNRDSSEPKLT 112

Query: 1001 PEQAAKLCDRNFGVGADGVIFAMPGVNGTDYSMRIFNSDGSEPEMCGNGVRCFARFITEL 822
            PEQA KLCDRNFG+GADGVIFAMPG+NGTDY+MRIFNSDGSEPEMCGNGVRCFARFI EL
Sbjct: 113  PEQAVKLCDRNFGIGADGVIFAMPGINGTDYTMRIFNSDGSEPEMCGNGVRCFARFIAEL 172

Query: 821  EDLKGKKSFTIHTGAGLIVPEIKDDGKVRVDMGQPILTASDVPTKLVATTDQAVVGAPLE 642
            E+L GK+SFT+HTGAGLIVPEI+DDGKV+VDMG+PIL A DVPTKL A  DQ+VV + L 
Sbjct: 173  ENLHGKQSFTLHTGAGLIVPEIQDDGKVKVDMGKPILKALDVPTKLPANKDQSVVKSELN 232

Query: 641  VNGVTWNVTCVSMGNPHCITFGTNECQSLQVEDLNLSDVGPKFENHEVFPTRTNTEFVQV 462
            V+GV+WNVTCVSMGNPHC+TFGT   Q+LQV++LNL+D+GPKFE+H +FP RTNTEFVQV
Sbjct: 233  VDGVSWNVTCVSMGNPHCVTFGTKGGQNLQVDELNLADIGPKFEHHAMFPARTNTEFVQV 292

Query: 461  LSRSHLKMRVWERXXXXXXXXXXXXXXXXXXXVLEGRSERSCTVDLPGGPLEIEWKEDDN 282
            +SRSHLKMRVWER                   VLEG + RSCTVDLPGGPL+IEW+E+DN
Sbjct: 293  ISRSHLKMRVWERGAGATLACGTGACAVVVAAVLEGHAGRSCTVDLPGGPLDIEWREEDN 352

Query: 281  HIYMTGPAEVVFYGSTPL 228
            H+YMTGPAE+VFYGS PL
Sbjct: 353  HVYMTGPAEIVFYGSVPL 370


>emb|CBI32677.3| unnamed protein product [Vitis vinifera]
          Length = 307

 Score =  467 bits (1202), Expect = e-129
 Identities = 225/308 (73%), Positives = 257/308 (83%)
 Frame = -1

Query: 1151 MSIETTPVKESTPLFLEQRASKFLHFVKYQGLGNDFILVDNLDSLEPKVTPEQAAKLCDR 972
            MSIE    K S   FL+++ S FLHFVKY GLGNDFILVDN DS EPK+TPEQA KLCDR
Sbjct: 1    MSIEALE-KGSQTSFLDRKESGFLHFVKYHGLGNDFILVDNRDSSEPKLTPEQAVKLCDR 59

Query: 971  NFGVGADGVIFAMPGVNGTDYSMRIFNSDGSEPEMCGNGVRCFARFITELEDLKGKKSFT 792
            NFG+GADGVIFAMPG+NGTDY+MRIFNSDGSEPEMCGNGVRCFARFI ELE+L GK+SFT
Sbjct: 60   NFGIGADGVIFAMPGINGTDYTMRIFNSDGSEPEMCGNGVRCFARFIAELENLHGKQSFT 119

Query: 791  IHTGAGLIVPEIKDDGKVRVDMGQPILTASDVPTKLVATTDQAVVGAPLEVNGVTWNVTC 612
            +HTGAGLIVPEI+DDGKV+VDMG+PIL A DVPTKL A  DQ+VV + L V+GV+WNVTC
Sbjct: 120  LHTGAGLIVPEIQDDGKVKVDMGKPILKALDVPTKLPANKDQSVVKSELNVDGVSWNVTC 179

Query: 611  VSMGNPHCITFGTNECQSLQVEDLNLSDVGPKFENHEVFPTRTNTEFVQVLSRSHLKMRV 432
            VSMGNPHC+TFGT   Q+LQV++LNL+D+GPKFE+H +FP RTNTEFVQV+SRSHLKMRV
Sbjct: 180  VSMGNPHCVTFGTKGGQNLQVDELNLADIGPKFEHHAMFPARTNTEFVQVISRSHLKMRV 239

Query: 431  WERXXXXXXXXXXXXXXXXXXXVLEGRSERSCTVDLPGGPLEIEWKEDDNHIYMTGPAEV 252
            WER                   VLEG + RSCTVDLPGGPL+IEW+E+DNH+YMTGPAE+
Sbjct: 240  WERGAGATLACGTGACAVVVAAVLEGHAGRSCTVDLPGGPLDIEWREEDNHVYMTGPAEI 299

Query: 251  VFYGSTPL 228
            VFYGS PL
Sbjct: 300  VFYGSVPL 307


>ref|XP_002533003.1| Diaminopimelate epimerase, putative [Ricinus communis]
            gi|223527214|gb|EEF29378.1| Diaminopimelate epimerase,
            putative [Ricinus communis]
          Length = 369

 Score =  466 bits (1200), Expect = e-129
 Identities = 233/338 (68%), Positives = 267/338 (78%), Gaps = 7/338 (2%)
 Frame = -1

Query: 1220 SLSHLNLFKPKPL-----PTFRIS--ASSSMSIETTPVKESTPLFLEQRASKFLHFVKYQ 1062
            SL +      KPL     P FR+   +++SMS E  P K ST  FL++R S   HFVKYQ
Sbjct: 33   SLPNFKSNSVKPLISSKNPNFRLLLVSAASMSAEA-PEKISTASFLDRRESGIHHFVKYQ 91

Query: 1061 GLGNDFILVDNLDSLEPKVTPEQAAKLCDRNFGVGADGVIFAMPGVNGTDYSMRIFNSDG 882
            GLGNDFILVDN DS EP++TPEQA +LCDRNFG+GADGVIFAMPG NGTDYSMRIFNSDG
Sbjct: 92   GLGNDFILVDNRDSTEPRITPEQAVRLCDRNFGIGADGVIFAMPGTNGTDYSMRIFNSDG 151

Query: 881  SEPEMCGNGVRCFARFITELEDLKGKKSFTIHTGAGLIVPEIKDDGKVRVDMGQPILTAS 702
            SEPEMCGNGVRCFARFI ELE+L+GK+SFTIHTGAGLIVPEI++DGKV+VDMG+PIL AS
Sbjct: 152  SEPEMCGNGVRCFARFIAELENLQGKQSFTIHTGAGLIVPEIQEDGKVKVDMGEPILKAS 211

Query: 701  DVPTKLVATTDQAVVGAPLEVNGVTWNVTCVSMGNPHCITFGTNECQSLQVEDLNLSDVG 522
            DVPT+L      AVV A L ++GVTWNVTCVSMGNPHC+TFG+NE Q LQV+ LNL+++G
Sbjct: 212  DVPTRLRENKGDAVVKAKLNIDGVTWNVTCVSMGNPHCVTFGSNENQDLQVDKLNLAEIG 271

Query: 521  PKFENHEVFPTRTNTEFVQVLSRSHLKMRVWERXXXXXXXXXXXXXXXXXXXVLEGRSER 342
            PKFE+H+VFP RTNTEFVQV S SHLKMRVWER                   VLEGR+ R
Sbjct: 272  PKFEHHDVFPARTNTEFVQVHSHSHLKMRVWERGAGATLACGTGACATVVAAVLEGRAGR 331

Query: 341  SCTVDLPGGPLEIEWKEDDNHIYMTGPAEVVFYGSTPL 228
            +CTVDLPGGPLEIEWKE+DNH+YMTGPAE VFYG+  L
Sbjct: 332  NCTVDLPGGPLEIEWKEEDNHVYMTGPAEAVFYGAVAL 369


>ref|NP_190926.1| diaminopimelate epimerase [Arabidopsis thaliana]
            gi|75263858|sp|Q9LFG2.1|DAPF_ARATH RecName:
            Full=Diaminopimelate epimerase, chloroplastic; Short=DAP
            epimerase; Flags: Precursor gi|6729509|emb|CAB67665.1|
            diaminopimelate epimerase-like protein [Arabidopsis
            thaliana] gi|22022530|gb|AAM83223.1| AT3g53580/F4P12_280
            [Arabidopsis thaliana] gi|23505901|gb|AAN28810.1|
            At3g53580/F4P12_280 [Arabidopsis thaliana]
            gi|332645592|gb|AEE79113.1| diaminopimelate epimerase
            [Arabidopsis thaliana]
          Length = 362

 Score =  460 bits (1183), Expect = e-127
 Identities = 227/318 (71%), Positives = 257/318 (80%)
 Frame = -1

Query: 1181 PTFRISASSSMSIETTPVKESTPLFLEQRASKFLHFVKYQGLGNDFILVDNLDSLEPKVT 1002
            P+ R+SA++SM   T   K S   FL+++ +  LHFVKY GLGNDFILVDN DS EPK+T
Sbjct: 46   PSLRVSAAASMDAVTAE-KFSPASFLDKKETGVLHFVKYHGLGNDFILVDNRDSSEPKIT 104

Query: 1001 PEQAAKLCDRNFGVGADGVIFAMPGVNGTDYSMRIFNSDGSEPEMCGNGVRCFARFITEL 822
             EQAAKLCDRNFGVGADGVIFAMPGVNGTDY+MRIFNSDGSEPEMCGNGVRCFARFI EL
Sbjct: 105  QEQAAKLCDRNFGVGADGVIFAMPGVNGTDYAMRIFNSDGSEPEMCGNGVRCFARFIAEL 164

Query: 821  EDLKGKKSFTIHTGAGLIVPEIKDDGKVRVDMGQPILTASDVPTKLVATTDQAVVGAPLE 642
            E+L+GK SFTIHTGAGLIVPEI+DDG+V+VDMG PIL A DVPTKL     +AVV A L 
Sbjct: 165  ENLQGKHSFTIHTGAGLIVPEIQDDGQVKVDMGTPILKAQDVPTKLSGNKGEAVVEAELV 224

Query: 641  VNGVTWNVTCVSMGNPHCITFGTNECQSLQVEDLNLSDVGPKFENHEVFPTRTNTEFVQV 462
            V+GV+WNVTCVSMGNPHCITFG     +L+V+DLNL ++GPKFE+HE+FP RTNTEFV+V
Sbjct: 225  VDGVSWNVTCVSMGNPHCITFGKKGGPNLKVDDLNLPEIGPKFEHHEMFPARTNTEFVEV 284

Query: 461  LSRSHLKMRVWERXXXXXXXXXXXXXXXXXXXVLEGRSERSCTVDLPGGPLEIEWKEDDN 282
            LSRSHLKMRVWER                   VLEGR++R CTVDLPGGPLEIEWK++DN
Sbjct: 285  LSRSHLKMRVWERGAGATLACGTGACALVVAAVLEGRADRKCTVDLPGGPLEIEWKQEDN 344

Query: 281  HIYMTGPAEVVFYGSTPL 228
            HIYMTGPAE VFYGS  L
Sbjct: 345  HIYMTGPAEAVFYGSALL 362


>ref|XP_004142088.1| PREDICTED: diaminopimelate epimerase, chloroplastic-like [Cucumis
            sativus]
          Length = 364

 Score =  457 bits (1177), Expect = e-126
 Identities = 222/342 (64%), Positives = 265/342 (77%), Gaps = 23/342 (6%)
 Frame = -1

Query: 1184 LPTFRISASSSMSIETTP---------------------VKESTPLF--LEQRASKFLHF 1074
            +P+ R+S +SS+ +++ P                     V E  P F  L++R S  LHF
Sbjct: 22   IPSLRLSFTSSLQLDSLPKYSARGRSPRLSVSATSAGLEVTEKAPSFSFLDRRESGLLHF 81

Query: 1073 VKYQGLGNDFILVDNLDSLEPKVTPEQAAKLCDRNFGVGADGVIFAMPGVNGTDYSMRIF 894
            VKY GLGNDFILVDN DS EP++TPEQAAKLCDRNFG+GADGVIFAMPGVNGTDY+MRIF
Sbjct: 82   VKYHGLGNDFILVDNRDSSEPRITPEQAAKLCDRNFGIGADGVIFAMPGVNGTDYTMRIF 141

Query: 893  NSDGSEPEMCGNGVRCFARFITELEDLKGKKSFTIHTGAGLIVPEIKDDGKVRVDMGQPI 714
            NSDGSEPEMCGNGVRCFARFI ELE+L+G+ SFT+HTGAGLI+PE++DDG+V+VDMG+PI
Sbjct: 142  NSDGSEPEMCGNGVRCFARFIAELENLQGRHSFTVHTGAGLIIPELQDDGQVKVDMGEPI 201

Query: 713  LTASDVPTKLVATTDQAVVGAPLEVNGVTWNVTCVSMGNPHCITFGTNECQSLQVEDLNL 534
            L A+DVPT+L  T DQ+VV A +EV+GV W+VTCVSMGNPHC+TF     Q+LQV+ +NL
Sbjct: 202  LKATDVPTRLTPTKDQSVVKAAIEVDGVAWSVTCVSMGNPHCVTFSNKIEQNLQVDGINL 261

Query: 533  SDVGPKFENHEVFPTRTNTEFVQVLSRSHLKMRVWERXXXXXXXXXXXXXXXXXXXVLEG 354
            + +GPKFE+HE+FP RTNTEFVQVLS SHLKMRVWER                   VLEG
Sbjct: 262  AAIGPKFEHHEMFPARTNTEFVQVLSNSHLKMRVWERGAGATLACGTGACAVVVAAVLEG 321

Query: 353  RSERSCTVDLPGGPLEIEWKEDDNHIYMTGPAEVVFYGSTPL 228
            R+ R+CTVDLPGGPL+IEW E+DNH+YMTGPAEVVFYGS PL
Sbjct: 322  RAGRNCTVDLPGGPLQIEWSEEDNHVYMTGPAEVVFYGSVPL 363