BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00005898
         (507 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002274093.1| PREDICTED: F-box protein SKIP19 [Vitis vinif...    57   1e-06
ref|XP_003571397.1| PREDICTED: putative F-box/LRR-repeat protein...    57   2e-06
ref|XP_003541669.1| PREDICTED: F-box protein SKIP19-like [Glycin...    56   3e-06
ref|NP_001061180.1| Os08g0193500 [Oryza sativa Japonica Group] g...    55   5e-06
gb|EEE68186.1| hypothetical protein OsJ_26329 [Oryza sativa Japo...    55   5e-06

>ref|XP_002274093.1| PREDICTED: F-box protein SKIP19 [Vitis vinifera]
           gi|147853333|emb|CAN82327.1| hypothetical protein
           VITISV_041807 [Vitis vinifera]
           gi|297740788|emb|CBI30970.3| unnamed protein product
           [Vitis vinifera]
          Length = 321

 Score = 57.4 bits (137), Expect = 1e-06
 Identities = 26/91 (28%), Positives = 48/91 (52%)
 Frame = +1

Query: 202 EGRSKVKATMKRSWEDLDGDILLSIYARLCVTDIILGASLCCSFWYKVSKEPSLWRDVDL 381
           +  S+ +   +R+W++L  D+   I ++L   +I+  A   CSFW K+ +EP +WR++D+
Sbjct: 7   DSTSREEEEEERNWQELPRDVTSMILSKLNAVEILSSAQFVCSFWRKLCREPMMWRNIDM 66

Query: 382 SCFDFIEEKDVSPSQFIRSVVTRSQGSITSI 474
                + +      +  R  V RS G + SI
Sbjct: 67  HNLGDLCDLGYDLEEMARHAVDRSGGQLLSI 97


>ref|XP_003571397.1| PREDICTED: putative F-box/LRR-repeat protein 23-like [Brachypodium
           distachyon]
          Length = 291

 Score = 57.0 bits (136), Expect = 2e-06
 Identities = 26/87 (29%), Positives = 46/87 (52%), Gaps = 4/87 (4%)
 Frame = +1

Query: 217 VKATMKRSWEDLDGDILLSIYARLCVTDIILGASLCCSFWYKVSKEPSLWRDVDLSCFDF 396
           V+    R W +L  D+L S++A+L   D+++GA L C  W + +K P+LWR +D+   + 
Sbjct: 21  VQPDTARDWSELPLDVLASVFAKLGAVDVLMGAGLVCHSWLEAAKVPNLWRYIDMEHHEV 80

Query: 397 IEEKDVSPSQFI----RSVVTRSQGSI 465
           +  K       +    ++ V RS G +
Sbjct: 81  LRGKKKKKRDVLCAMAKTAVDRSDGQL 107


>ref|XP_003541669.1| PREDICTED: F-box protein SKIP19-like [Glycine max]
          Length = 311

 Score = 55.8 bits (133), Expect = 3e-06
 Identities = 25/57 (43%), Positives = 36/57 (63%)
 Frame = +1

Query: 211 SKVKATMKRSWEDLDGDILLSIYARLCVTDIILGASLCCSFWYKVSKEPSLWRDVDL 381
           SK  A  +R+W DL  D+L +I+ +L  T+I+  A   CS W  +SKEP LWR +D+
Sbjct: 4   SKEAAAEERNWLDLPRDVLCTIFQKLGATEILTRAQGVCSVWRAISKEPLLWRTIDM 60


>ref|NP_001061180.1| Os08g0193500 [Oryza sativa Japonica Group]
           gi|40253668|dbj|BAD05611.1| glutamic acid-rich protein
           precursor-like protein [Oryza sativa Japonica Group]
           gi|113623149|dbj|BAF23094.1| Os08g0193500 [Oryza sativa
           Japonica Group]
          Length = 447

 Score = 55.5 bits (132), Expect = 5e-06
 Identities = 27/80 (33%), Positives = 42/80 (52%), Gaps = 1/80 (1%)
 Frame = +1

Query: 235 RSWEDLDGDILLSIYARLCVTDIILGASLCCSFWYKVSKEPSLWRDVDLSCFDFIEEKDV 414
           R W DL  D L +I+ +L   ++++GA L C  W   +K P LWR VD++    +  K +
Sbjct: 14  RDWSDLPTDALSTIFMKLGSIEVLMGAGLVCHSWLAAAKSPELWRSVDMTRHKVVFSKGI 73

Query: 415 SPSQFIRSV-VTRSQGSITS 471
                +  V + RSQG + S
Sbjct: 74  DTMCAMAKVAIDRSQGKMES 93


>gb|EEE68186.1| hypothetical protein OsJ_26329 [Oryza sativa Japonica Group]
          Length = 417

 Score = 55.5 bits (132), Expect = 5e-06
 Identities = 27/80 (33%), Positives = 42/80 (52%), Gaps = 1/80 (1%)
 Frame = +1

Query: 235 RSWEDLDGDILLSIYARLCVTDIILGASLCCSFWYKVSKEPSLWRDVDLSCFDFIEEKDV 414
           R W DL  D L +I+ +L   ++++GA L C  W   +K P LWR VD++    +  K +
Sbjct: 14  RDWSDLPTDALSTIFMKLGSIEVLMGAGLVCHSWLAAAKSPELWRSVDMTRHKVVFSKGI 73

Query: 415 SPSQFIRSV-VTRSQGSITS 471
                +  V + RSQG + S
Sbjct: 74  DTMCAMAKVAIDRSQGKMES 93