BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00005880
         (1330 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002280741.1| PREDICTED: nuclear transcription factor Y su...   359   1e-96
gb|AFK49671.1| nuclear transcription factor Y subunit C2 [Medica...   350   6e-94
ref|XP_003626304.1| Nuclear transcription factor Y subunit C-9 [...   350   6e-94
ref|XP_003633639.1| PREDICTED: nuclear transcription factor Y su...   347   4e-93
ref|XP_002284851.1| PREDICTED: nuclear transcription factor Y su...   347   4e-93

>ref|XP_002280741.1| PREDICTED: nuclear transcription factor Y subunit C-9-like [Vitis
            vinifera]
          Length = 262

 Score =  359 bits (921), Expect = 1e-96
 Identities = 187/254 (73%), Positives = 199/254 (78%), Gaps = 1/254 (0%)
 Frame = +3

Query: 279  MDQQGQGQPPAMGVVTSGAQMPYGGNPYQSNQMTGDTSGPIVTSVGSIQPTGQPAAYSAS 458
            MDQ G GQPPAMG+V S AQMPYG  P+Q NQM G TSGP   +VGSIQ   QPA  S S
Sbjct: 1    MDQPGHGQPPAMGMVGSAAQMPYGIPPFQPNQMVG-TSGP--GTVGSIQSPTQPAGIS-S 56

Query: 459  PXXXXXXXXXXXXXXXXXXXXXXXXXXTFWANQYQEIEQTTDFKNHSLPLARIKKIMKAD 638
            P                           FW NQYQEIEQTTDFKNHSLPLARIKKIMKAD
Sbjct: 57   PAQLAQHQLAYQHIHQQQQQQLQQQLQNFWQNQYQEIEQTTDFKNHSLPLARIKKIMKAD 116

Query: 639  EDVRMIAAEAPVIFARACEMFILELTLRSWNHTEENKRRTLQKNDIAAAITRTDIFDFLV 818
            EDVRMI+AEAPVIFARACEMFILELTLRSWNHTEENKRRTLQKNDIAAAITRTDIFDFLV
Sbjct: 117  EDVRMISAEAPVIFARACEMFILELTLRSWNHTEENKRRTLQKNDIAAAITRTDIFDFLV 176

Query: 819  DIVPREDLKDEVLASIPRGGPLPVGGPADPHPYYYI-PQHSPQVGTPGMIMGKPVIDQAM 995
            DIVPREDLKDEVLASIPRGGPLPVGGPA+  PY+Y+ PQH PQVG PGM+MGK V+DQ +
Sbjct: 177  DIVPREDLKDEVLASIPRGGPLPVGGPAEGLPYFYMQPQHGPQVGAPGMVMGKTVMDQGL 236

Query: 996  YAQQPRPYMSPQMW 1037
            Y QQPRPY++ QMW
Sbjct: 237  YGQQPRPYVAQQMW 250


>gb|AFK49671.1| nuclear transcription factor Y subunit C2 [Medicago truncatula]
          Length = 260

 Score =  350 bits (897), Expect = 6e-94
 Identities = 183/254 (72%), Positives = 196/254 (77%), Gaps = 1/254 (0%)
 Frame = +3

Query: 279  MDQQGQGQPPAMGVVTSGAQMPYGGNPYQSNQMTGDTSGPIVTSVGSIQPTGQPAAYSAS 458
            MD QG  Q P MGVV SG+QMPYG NPYQSNQMTG   G +VTSVG +Q TGQPA     
Sbjct: 1    MDHQGHNQNPQMGVVGSGSQMPYGSNPYQSNQMTG-APGSVVTSVGGMQSTGQPAGAQLG 59

Query: 459  PXXXXXXXXXXXXXXXXXXXXXXXXXXTFWANQYQEIEQTTDFKNHSLPLARIKKIMKAD 638
                                       +FW+NQYQEIE+ TDFKNHSLPLARIKKIMKAD
Sbjct: 60   QHQLAYQHIHQQQQQQLQQQLQ-----SFWSNQYQEIEKVTDFKNHSLPLARIKKIMKAD 114

Query: 639  EDVRMIAAEAPVIFARACEMFILELTLRSWNHTEENKRRTLQKNDIAAAITRTDIFDFLV 818
            EDVRMI+AEAPVIFARACEMFILELTLRSWNHTEENKRRTLQKNDIAAAITRTDIFDFLV
Sbjct: 115  EDVRMISAEAPVIFARACEMFILELTLRSWNHTEENKRRTLQKNDIAAAITRTDIFDFLV 174

Query: 819  DIVPREDLKDEVLASIPRGGPLPVGGPADPHPYYYI-PQHSPQVGTPGMIMGKPVIDQAM 995
            DIVPREDLKDEVLASIPR G +PV GPAD  PY Y+ PQH+ QVGT G+IMGKPV+D  M
Sbjct: 175  DIVPREDLKDEVLASIPR-GTMPVAGPADALPYCYMPPQHASQVGTAGVIMGKPVMDPNM 233

Query: 996  YAQQPRPYMSPQMW 1037
            YAQQP PYM+PQMW
Sbjct: 234  YAQQPHPYMAPQMW 247


>ref|XP_003626304.1| Nuclear transcription factor Y subunit C-9 [Medicago truncatula]
            gi|355501319|gb|AES82522.1| Nuclear transcription factor
            Y subunit C-9 [Medicago truncatula]
          Length = 311

 Score =  350 bits (897), Expect = 6e-94
 Identities = 183/254 (72%), Positives = 196/254 (77%), Gaps = 1/254 (0%)
 Frame = +3

Query: 279  MDQQGQGQPPAMGVVTSGAQMPYGGNPYQSNQMTGDTSGPIVTSVGSIQPTGQPAAYSAS 458
            MD QG  Q P MGVV SG+QMPYG NPYQSNQMTG   G +VTSVG +Q TGQPA     
Sbjct: 52   MDHQGHNQNPQMGVVGSGSQMPYGSNPYQSNQMTG-APGSVVTSVGGMQSTGQPAGAQLG 110

Query: 459  PXXXXXXXXXXXXXXXXXXXXXXXXXXTFWANQYQEIEQTTDFKNHSLPLARIKKIMKAD 638
                                       +FW+NQYQEIE+ TDFKNHSLPLARIKKIMKAD
Sbjct: 111  QHQLAYQHIHQQQQQQLQQQLQ-----SFWSNQYQEIEKVTDFKNHSLPLARIKKIMKAD 165

Query: 639  EDVRMIAAEAPVIFARACEMFILELTLRSWNHTEENKRRTLQKNDIAAAITRTDIFDFLV 818
            EDVRMI+AEAPVIFARACEMFILELTLRSWNHTEENKRRTLQKNDIAAAITRTDIFDFLV
Sbjct: 166  EDVRMISAEAPVIFARACEMFILELTLRSWNHTEENKRRTLQKNDIAAAITRTDIFDFLV 225

Query: 819  DIVPREDLKDEVLASIPRGGPLPVGGPADPHPYYYI-PQHSPQVGTPGMIMGKPVIDQAM 995
            DIVPREDLKDEVLASIPR G +PV GPAD  PY Y+ PQH+ QVGT G+IMGKPV+D  M
Sbjct: 226  DIVPREDLKDEVLASIPR-GTMPVAGPADALPYCYMPPQHASQVGTAGVIMGKPVMDPNM 284

Query: 996  YAQQPRPYMSPQMW 1037
            YAQQP PYM+PQMW
Sbjct: 285  YAQQPHPYMAPQMW 298


>ref|XP_003633639.1| PREDICTED: nuclear transcription factor Y subunit C-9-like isoform 2
            [Vitis vinifera]
          Length = 268

 Score =  347 bits (890), Expect = 4e-93
 Identities = 180/255 (70%), Positives = 195/255 (76%), Gaps = 2/255 (0%)
 Frame = +3

Query: 279  MDQQGQGQPPAMGVVTSGAQMPYGGNPYQSNQMTGD-TSGPIVTSVGSIQPTGQPAAYSA 455
            MD QG GQ P MG+  S AQ+PYG NPYQ NQM G  TSG +VTSVG+IQ  G PA    
Sbjct: 6    MDHQGHGQTPVMGMAGSAAQLPYGTNPYQHNQMGGTPTSGSVVTSVGTIQSPGHPAGAQL 65

Query: 456  SPXXXXXXXXXXXXXXXXXXXXXXXXXXTFWANQYQEIEQTTDFKNHSLPLARIKKIMKA 635
            +                           +FWANQ+QEIE+ TDFKNHSLPLARIKKIMKA
Sbjct: 66   AQHQLAYQHMHHQQQQQLQQQLQ-----SFWANQHQEIEKATDFKNHSLPLARIKKIMKA 120

Query: 636  DEDVRMIAAEAPVIFARACEMFILELTLRSWNHTEENKRRTLQKNDIAAAITRTDIFDFL 815
            DEDVRMI+AEAPV+FARACEMFILELTLRSWNHTEENKRRTLQKNDIAAAITRTDIFDFL
Sbjct: 121  DEDVRMISAEAPVVFARACEMFILELTLRSWNHTEENKRRTLQKNDIAAAITRTDIFDFL 180

Query: 816  VDIVPREDLKDEVLASIPRGGPLPVGGPADPHPYYYIP-QHSPQVGTPGMIMGKPVIDQA 992
            VDIVPREDLKDEVL SIPR G +PVGG +D  PYYY+P QHSPQVGTPGMIMGKPV+D A
Sbjct: 181  VDIVPREDLKDEVLTSIPR-GTMPVGGASDTVPYYYMPAQHSPQVGTPGMIMGKPVMDPA 239

Query: 993  MYAQQPRPYMSPQMW 1037
            +YAQQP PYM   MW
Sbjct: 240  LYAQQPHPYMGQSMW 254


>ref|XP_002284851.1| PREDICTED: nuclear transcription factor Y subunit C-9-like isoform 1
            [Vitis vinifera]
          Length = 263

 Score =  347 bits (890), Expect = 4e-93
 Identities = 180/255 (70%), Positives = 195/255 (76%), Gaps = 2/255 (0%)
 Frame = +3

Query: 279  MDQQGQGQPPAMGVVTSGAQMPYGGNPYQSNQMTGD-TSGPIVTSVGSIQPTGQPAAYSA 455
            MD QG GQ P MG+  S AQ+PYG NPYQ NQM G  TSG +VTSVG+IQ  G PA    
Sbjct: 1    MDHQGHGQTPVMGMAGSAAQLPYGTNPYQHNQMGGTPTSGSVVTSVGTIQSPGHPAGAQL 60

Query: 456  SPXXXXXXXXXXXXXXXXXXXXXXXXXXTFWANQYQEIEQTTDFKNHSLPLARIKKIMKA 635
            +                           +FWANQ+QEIE+ TDFKNHSLPLARIKKIMKA
Sbjct: 61   AQHQLAYQHMHHQQQQQLQQQLQ-----SFWANQHQEIEKATDFKNHSLPLARIKKIMKA 115

Query: 636  DEDVRMIAAEAPVIFARACEMFILELTLRSWNHTEENKRRTLQKNDIAAAITRTDIFDFL 815
            DEDVRMI+AEAPV+FARACEMFILELTLRSWNHTEENKRRTLQKNDIAAAITRTDIFDFL
Sbjct: 116  DEDVRMISAEAPVVFARACEMFILELTLRSWNHTEENKRRTLQKNDIAAAITRTDIFDFL 175

Query: 816  VDIVPREDLKDEVLASIPRGGPLPVGGPADPHPYYYIP-QHSPQVGTPGMIMGKPVIDQA 992
            VDIVPREDLKDEVL SIPR G +PVGG +D  PYYY+P QHSPQVGTPGMIMGKPV+D A
Sbjct: 176  VDIVPREDLKDEVLTSIPR-GTMPVGGASDTVPYYYMPAQHSPQVGTPGMIMGKPVMDPA 234

Query: 993  MYAQQPRPYMSPQMW 1037
            +YAQQP PYM   MW
Sbjct: 235  LYAQQPHPYMGQSMW 249