BLASTX nr result

ID: Coptis21_contig00005875 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00005875
         (238 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AFK36285.1| unknown [Medicago truncatula]                           78   9e-13
ref|XP_003549396.1| PREDICTED: uncharacterized protein LOC100791...    78   9e-13
ref|XP_003541338.1| PREDICTED: uncharacterized protein LOC100804...    78   9e-13
ref|XP_003610094.1| U4/U6.U5 small nuclear ribonucleoprotein 27 ...    78   9e-13
ref|XP_002324468.1| predicted protein [Populus trichocarpa] gi|2...    77   2e-12

>gb|AFK36285.1| unknown [Medicago truncatula]
          Length = 186

 Score = 77.8 bits (190), Expect = 9e-13
 Identities = 35/36 (97%), Positives = 36/36 (100%)
 Frame = +1

Query: 1   FDSTKGKPVPGADVSGIRAVTKRQPRQYMNRRGGFN 108
           FDSTKGKPVPGADVSG+RAVTKRQPRQYMNRRGGFN
Sbjct: 142 FDSTKGKPVPGADVSGVRAVTKRQPRQYMNRRGGFN 177


>ref|XP_003549396.1| PREDICTED: uncharacterized protein LOC100791549 [Glycine max]
          Length = 182

 Score = 77.8 bits (190), Expect = 9e-13
 Identities = 35/36 (97%), Positives = 36/36 (100%)
 Frame = +1

Query: 1   FDSTKGKPVPGADVSGIRAVTKRQPRQYMNRRGGFN 108
           FDSTKGKPVPGADVSG+RAVTKRQPRQYMNRRGGFN
Sbjct: 138 FDSTKGKPVPGADVSGVRAVTKRQPRQYMNRRGGFN 173


>ref|XP_003541338.1| PREDICTED: uncharacterized protein LOC100804021 [Glycine max]
          Length = 184

 Score = 77.8 bits (190), Expect = 9e-13
 Identities = 35/36 (97%), Positives = 36/36 (100%)
 Frame = +1

Query: 1   FDSTKGKPVPGADVSGIRAVTKRQPRQYMNRRGGFN 108
           FDSTKGKPVPGADVSG+RAVTKRQPRQYMNRRGGFN
Sbjct: 140 FDSTKGKPVPGADVSGVRAVTKRQPRQYMNRRGGFN 175


>ref|XP_003610094.1| U4/U6.U5 small nuclear ribonucleoprotein 27 kDa protein [Medicago
           truncatula] gi|355511149|gb|AES92291.1| U4/U6.U5 small
           nuclear ribonucleoprotein 27 kDa protein [Medicago
           truncatula]
          Length = 186

 Score = 77.8 bits (190), Expect = 9e-13
 Identities = 35/36 (97%), Positives = 36/36 (100%)
 Frame = +1

Query: 1   FDSTKGKPVPGADVSGIRAVTKRQPRQYMNRRGGFN 108
           FDSTKGKPVPGADVSG+RAVTKRQPRQYMNRRGGFN
Sbjct: 142 FDSTKGKPVPGADVSGVRAVTKRQPRQYMNRRGGFN 177


>ref|XP_002324468.1| predicted protein [Populus trichocarpa] gi|222865902|gb|EEF03033.1|
           predicted protein [Populus trichocarpa]
          Length = 195

 Score = 76.6 bits (187), Expect = 2e-12
 Identities = 34/36 (94%), Positives = 36/36 (100%)
 Frame = +1

Query: 1   FDSTKGKPVPGADVSGIRAVTKRQPRQYMNRRGGFN 108
           FDSTKGKPVPGADVSG++AVTKRQPRQYMNRRGGFN
Sbjct: 151 FDSTKGKPVPGADVSGVKAVTKRQPRQYMNRRGGFN 186


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