BLASTX nr result
ID: Coptis21_contig00005875
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis21_contig00005875 (238 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value gb|AFK36285.1| unknown [Medicago truncatula] 78 9e-13 ref|XP_003549396.1| PREDICTED: uncharacterized protein LOC100791... 78 9e-13 ref|XP_003541338.1| PREDICTED: uncharacterized protein LOC100804... 78 9e-13 ref|XP_003610094.1| U4/U6.U5 small nuclear ribonucleoprotein 27 ... 78 9e-13 ref|XP_002324468.1| predicted protein [Populus trichocarpa] gi|2... 77 2e-12 >gb|AFK36285.1| unknown [Medicago truncatula] Length = 186 Score = 77.8 bits (190), Expect = 9e-13 Identities = 35/36 (97%), Positives = 36/36 (100%) Frame = +1 Query: 1 FDSTKGKPVPGADVSGIRAVTKRQPRQYMNRRGGFN 108 FDSTKGKPVPGADVSG+RAVTKRQPRQYMNRRGGFN Sbjct: 142 FDSTKGKPVPGADVSGVRAVTKRQPRQYMNRRGGFN 177 >ref|XP_003549396.1| PREDICTED: uncharacterized protein LOC100791549 [Glycine max] Length = 182 Score = 77.8 bits (190), Expect = 9e-13 Identities = 35/36 (97%), Positives = 36/36 (100%) Frame = +1 Query: 1 FDSTKGKPVPGADVSGIRAVTKRQPRQYMNRRGGFN 108 FDSTKGKPVPGADVSG+RAVTKRQPRQYMNRRGGFN Sbjct: 138 FDSTKGKPVPGADVSGVRAVTKRQPRQYMNRRGGFN 173 >ref|XP_003541338.1| PREDICTED: uncharacterized protein LOC100804021 [Glycine max] Length = 184 Score = 77.8 bits (190), Expect = 9e-13 Identities = 35/36 (97%), Positives = 36/36 (100%) Frame = +1 Query: 1 FDSTKGKPVPGADVSGIRAVTKRQPRQYMNRRGGFN 108 FDSTKGKPVPGADVSG+RAVTKRQPRQYMNRRGGFN Sbjct: 140 FDSTKGKPVPGADVSGVRAVTKRQPRQYMNRRGGFN 175 >ref|XP_003610094.1| U4/U6.U5 small nuclear ribonucleoprotein 27 kDa protein [Medicago truncatula] gi|355511149|gb|AES92291.1| U4/U6.U5 small nuclear ribonucleoprotein 27 kDa protein [Medicago truncatula] Length = 186 Score = 77.8 bits (190), Expect = 9e-13 Identities = 35/36 (97%), Positives = 36/36 (100%) Frame = +1 Query: 1 FDSTKGKPVPGADVSGIRAVTKRQPRQYMNRRGGFN 108 FDSTKGKPVPGADVSG+RAVTKRQPRQYMNRRGGFN Sbjct: 142 FDSTKGKPVPGADVSGVRAVTKRQPRQYMNRRGGFN 177 >ref|XP_002324468.1| predicted protein [Populus trichocarpa] gi|222865902|gb|EEF03033.1| predicted protein [Populus trichocarpa] Length = 195 Score = 76.6 bits (187), Expect = 2e-12 Identities = 34/36 (94%), Positives = 36/36 (100%) Frame = +1 Query: 1 FDSTKGKPVPGADVSGIRAVTKRQPRQYMNRRGGFN 108 FDSTKGKPVPGADVSG++AVTKRQPRQYMNRRGGFN Sbjct: 151 FDSTKGKPVPGADVSGVKAVTKRQPRQYMNRRGGFN 186