BLASTX nr result

ID: Coptis21_contig00005872 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00005872
         (1120 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_001149435.1| nuclear binding protein35 [Zea mays] gi|1956...   299   e-106
gb|ACF88188.1| unknown [Zea mays] gi|413937637|gb|AFW72188.1| nu...   298   e-106
ref|NP_001149342.1| nucleotide-binding protein 1 [Zea mays] gi|1...   297   e-106
ref|XP_003575297.1| PREDICTED: cytosolic Fe-S cluster assembly f...   293   e-105
dbj|BAD22155.1| putative nucleotide binding protein [Oryza sativ...   293   e-105

>ref|NP_001149435.1| nuclear binding protein35 [Zea mays] gi|195627212|gb|ACG35436.1|
            nucleotide-binding protein 1 [Zea mays]
          Length = 348

 Score =  299 bits (766), Expect(2) = e-106
 Identities = 150/176 (85%), Positives = 162/176 (92%)
 Frame = -1

Query: 1120 LSFALAGVMDYQVGLLDIDICGPSIPKMLGLEGQGVHRSNLGLSLVYVEDNLGVMSIGFM 941
            LSFALA  MD+QVGLLDIDICGPSIPKMLGLEGQ +H+SNLG S VYVE NLGVMSIGFM
Sbjct: 84   LSFALAE-MDHQVGLLDIDICGPSIPKMLGLEGQDIHQSNLGWSPVYVESNLGVMSIGFM 142

Query: 940  LENKDDPVIWRGPKKDGLIKQFLKDVFWGELDYLVVDAPPGTSDEHITIVQLLQATGIDG 761
            L N DD VIWRGP+K+GLIKQFLKDV WGE+DYLVVDAPPGTSDEHI+IVQ LQATGIDG
Sbjct: 143  LPNPDDAVIWRGPRKNGLIKQFLKDVDWGEIDYLVVDAPPGTSDEHISIVQYLQATGIDG 202

Query: 760  AIIVTTPQQVSLIDVRKEINFCKKVGVPVLGVVENMSGLRQPLGDVRFMRVSETGE 593
            AIIVTTPQQVSLIDVRKEINFCKKVGVPVLGVVENMSGLRQPL D+RF+++ E G+
Sbjct: 203  AIIVTTPQQVSLIDVRKEINFCKKVGVPVLGVVENMSGLRQPLSDLRFIKLDEAGK 258



 Score =  115 bits (287), Expect(2) = e-106
 Identities = 52/64 (81%), Positives = 59/64 (92%)
 Frame = -3

Query: 485 CSEVFDTSGGGAAKMCLEMGVPFLGKVPMDPQLCKASEEGRSCFTDQRCSASAPALKKII 306
           CSEVFD+S GGA KMC EMGVPFLGKVPMDPQLCKA+EEGRSCF DQ+CSASAPAL+ I+
Sbjct: 282 CSEVFDSSKGGAEKMCHEMGVPFLGKVPMDPQLCKAAEEGRSCFADQKCSASAPALRNIV 341

Query: 305 EKLL 294
           +KL+
Sbjct: 342 KKLI 345


>gb|ACF88188.1| unknown [Zea mays] gi|413937637|gb|AFW72188.1| nucleotide-binding
            protein 1 [Zea mays]
          Length = 348

 Score =  298 bits (763), Expect(2) = e-106
 Identities = 150/176 (85%), Positives = 161/176 (91%)
 Frame = -1

Query: 1120 LSFALAGVMDYQVGLLDIDICGPSIPKMLGLEGQGVHRSNLGLSLVYVEDNLGVMSIGFM 941
            LSFALA  MD+QVGLLDIDICGPSIPKMLGLEGQ +H+SNLG S VYVE NLGVMSIGFM
Sbjct: 84   LSFALAE-MDHQVGLLDIDICGPSIPKMLGLEGQDIHQSNLGWSPVYVESNLGVMSIGFM 142

Query: 940  LENKDDPVIWRGPKKDGLIKQFLKDVFWGELDYLVVDAPPGTSDEHITIVQLLQATGIDG 761
            L N DD VIWRGP+K+GLIKQFLKDV WGE+DYLVVDAPPGTSDEHI+IVQ LQATGIDG
Sbjct: 143  LPNPDDAVIWRGPRKNGLIKQFLKDVDWGEIDYLVVDAPPGTSDEHISIVQYLQATGIDG 202

Query: 760  AIIVTTPQQVSLIDVRKEINFCKKVGVPVLGVVENMSGLRQPLGDVRFMRVSETGE 593
            AIIVTTPQQVSLIDVRKEINFCKKVGVPVLGVVENMSGLRQPL D+RF++  E G+
Sbjct: 203  AIIVTTPQQVSLIDVRKEINFCKKVGVPVLGVVENMSGLRQPLSDLRFIKSDEAGK 258



 Score =  115 bits (287), Expect(2) = e-106
 Identities = 52/64 (81%), Positives = 59/64 (92%)
 Frame = -3

Query: 485 CSEVFDTSGGGAAKMCLEMGVPFLGKVPMDPQLCKASEEGRSCFTDQRCSASAPALKKII 306
           CSEVFD+S GGA KMC EMGVPFLGKVPMDPQLCKA+EEGRSCF DQ+CSASAPAL+ I+
Sbjct: 282 CSEVFDSSKGGAEKMCHEMGVPFLGKVPMDPQLCKAAEEGRSCFADQKCSASAPALRNIV 341

Query: 305 EKLL 294
           +KL+
Sbjct: 342 KKLI 345


>ref|NP_001149342.1| nucleotide-binding protein 1 [Zea mays] gi|194703098|gb|ACF85633.1|
            unknown [Zea mays] gi|413922926|gb|AFW62858.1|
            nucleotide-binding protein 1 [Zea mays]
          Length = 348

 Score =  297 bits (761), Expect(2) = e-106
 Identities = 150/176 (85%), Positives = 160/176 (90%)
 Frame = -1

Query: 1120 LSFALAGVMDYQVGLLDIDICGPSIPKMLGLEGQGVHRSNLGLSLVYVEDNLGVMSIGFM 941
            LSFALA  MD+QVGLLDIDICGPSIPKMLGLEGQ +H+SNLG S VYVE NLGVMSIGFM
Sbjct: 84   LSFALAE-MDHQVGLLDIDICGPSIPKMLGLEGQDIHQSNLGWSPVYVESNLGVMSIGFM 142

Query: 940  LENKDDPVIWRGPKKDGLIKQFLKDVFWGELDYLVVDAPPGTSDEHITIVQLLQATGIDG 761
            L N DD VIWRGP+K+GLIKQFLKDV WGE+DYLVVDAPPGTSDEHI+IVQ LQATGIDG
Sbjct: 143  LPNPDDAVIWRGPRKNGLIKQFLKDVDWGEIDYLVVDAPPGTSDEHISIVQYLQATGIDG 202

Query: 760  AIIVTTPQQVSLIDVRKEINFCKKVGVPVLGVVENMSGLRQPLGDVRFMRVSETGE 593
            AIIVTTPQQVSLIDVRKEINFCKKVGVPVLGVVENMSGLRQPL D+ F++  E GE
Sbjct: 203  AIIVTTPQQVSLIDVRKEINFCKKVGVPVLGVVENMSGLRQPLSDLSFVKPGEAGE 258



 Score =  114 bits (284), Expect(2) = e-106
 Identities = 51/64 (79%), Positives = 59/64 (92%)
 Frame = -3

Query: 485 CSEVFDTSGGGAAKMCLEMGVPFLGKVPMDPQLCKASEEGRSCFTDQRCSASAPALKKII 306
           CSEVFD+S GGA KMC EMGVPFLGKVPMDPQLCKA+EEGRSCF+DQ+C ASAPAL+ I+
Sbjct: 282 CSEVFDSSKGGAEKMCREMGVPFLGKVPMDPQLCKAAEEGRSCFSDQKCGASAPALQSIV 341

Query: 305 EKLL 294
           +KL+
Sbjct: 342 KKLI 345


>ref|XP_003575297.1| PREDICTED: cytosolic Fe-S cluster assembly factor nubp1-like
            [Brachypodium distachyon]
          Length = 348

 Score =  293 bits (749), Expect(2) = e-105
 Identities = 145/176 (82%), Positives = 159/176 (90%)
 Frame = -1

Query: 1120 LSFALAGVMDYQVGLLDIDICGPSIPKMLGLEGQGVHRSNLGLSLVYVEDNLGVMSIGFM 941
            LSFALA  MD+QVGLLDIDICGPSIPKMLGLEGQ +H+SNLG S +YVE NLGVMSIGFM
Sbjct: 84   LSFALAE-MDHQVGLLDIDICGPSIPKMLGLEGQDIHQSNLGWSPIYVESNLGVMSIGFM 142

Query: 940  LENKDDPVIWRGPKKDGLIKQFLKDVFWGELDYLVVDAPPGTSDEHITIVQLLQATGIDG 761
            L N DD VIWRGP+K+GLIKQFLKDV WGE+DYL+VDAPPGTSDEHI+IVQ LQATG+DG
Sbjct: 143  LPNPDDAVIWRGPRKNGLIKQFLKDVDWGEIDYLIVDAPPGTSDEHISIVQYLQATGVDG 202

Query: 760  AIIVTTPQQVSLIDVRKEINFCKKVGVPVLGVVENMSGLRQPLGDVRFMRVSETGE 593
            AIIVTTPQQVSLIDVRKEINFCKKVGVPVLGVVENMSGLRQ   D++F++   TGE
Sbjct: 203  AIIVTTPQQVSLIDVRKEINFCKKVGVPVLGVVENMSGLRQAFSDLKFLKPGATGE 258



 Score =  117 bits (293), Expect(2) = e-105
 Identities = 55/64 (85%), Positives = 58/64 (90%)
 Frame = -3

Query: 485 CSEVFDTSGGGAAKMCLEMGVPFLGKVPMDPQLCKASEEGRSCFTDQRCSASAPALKKII 306
           CSEVFD+S GGA KMC EMGVPFLGKVPMDPQLCKA+EEGRSCF DQRCSASAPALK II
Sbjct: 282 CSEVFDSSKGGAEKMCHEMGVPFLGKVPMDPQLCKAAEEGRSCFVDQRCSASAPALKSII 341

Query: 305 EKLL 294
            KL+
Sbjct: 342 RKLI 345


>dbj|BAD22155.1| putative nucleotide binding protein [Oryza sativa Japonica Group]
            gi|125582775|gb|EAZ23706.1| hypothetical protein
            OsJ_07409 [Oryza sativa Japonica Group]
          Length = 355

 Score =  293 bits (749), Expect(2) = e-105
 Identities = 149/176 (84%), Positives = 158/176 (89%)
 Frame = -1

Query: 1120 LSFALAGVMDYQVGLLDIDICGPSIPKMLGLEGQGVHRSNLGLSLVYVEDNLGVMSIGFM 941
            LSFALA  MD QVGLLDIDICGPSIPKMLGLEGQ +H+SNLG S VYVE NLGVMSIGFM
Sbjct: 90   LSFALAE-MDCQVGLLDIDICGPSIPKMLGLEGQDIHQSNLGWSPVYVESNLGVMSIGFM 148

Query: 940  LENKDDPVIWRGPKKDGLIKQFLKDVFWGELDYLVVDAPPGTSDEHITIVQLLQATGIDG 761
            L N DD VIWRGP+K+GLIKQFLKDV WGE+DYLVVDAPPGTSDEHI+IVQ LQATGIDG
Sbjct: 149  LPNPDDAVIWRGPRKNGLIKQFLKDVDWGEIDYLVVDAPPGTSDEHISIVQYLQATGIDG 208

Query: 760  AIIVTTPQQVSLIDVRKEINFCKKVGVPVLGVVENMSGLRQPLGDVRFMRVSETGE 593
            AIIVTTPQQVSLIDVRKEINFCKKVGVP+LGVVENMSGLRQ L D RF++  E GE
Sbjct: 209  AIIVTTPQQVSLIDVRKEINFCKKVGVPILGVVENMSGLRQVLSDFRFVKQGEGGE 264



 Score =  116 bits (290), Expect(2) = e-105
 Identities = 53/64 (82%), Positives = 59/64 (92%)
 Frame = -3

Query: 485 CSEVFDTSGGGAAKMCLEMGVPFLGKVPMDPQLCKASEEGRSCFTDQRCSASAPALKKII 306
           CSEVFD+S GGA KMC EMGVPFLGKVPMDPQLCKA+EEGRSCF DQ+CSASAPALK I+
Sbjct: 288 CSEVFDSSKGGAEKMCNEMGVPFLGKVPMDPQLCKAAEEGRSCFVDQKCSASAPALKSIV 347

Query: 305 EKLL 294
           +KL+
Sbjct: 348 KKLI 351


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