BLASTX nr result

ID: Coptis21_contig00005862 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00005862
         (1614 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI28315.3| unnamed protein product [Vitis vinifera]              578   e-162
ref|XP_002275366.1| PREDICTED: heterogeneous nuclear ribonucleop...   578   e-162
ref|XP_004166457.1| PREDICTED: uncharacterized protein LOC101228...   569   e-160
ref|XP_004140160.1| PREDICTED: uncharacterized protein LOC101218...   569   e-160
ref|XP_002308472.1| predicted protein [Populus trichocarpa] gi|2...   561   e-157

>emb|CBI28315.3| unnamed protein product [Vitis vinifera]
          Length = 434

 Score =  578 bits (1491), Expect = e-162
 Identities = 284/366 (77%), Positives = 320/366 (87%), Gaps = 2/366 (0%)
 Frame = -2

Query: 1493 DVEDDEESRKHAELLAIPPHGSEVYVGGIPHDASEKDLKGFCESVGEVTEVRMMKGKDSR 1314
            ++ED++ES+KHAELLA+PPHGSEVYVGGI  DASE+DLK FCESVGEVTEVR+MKGKDS 
Sbjct: 34   EIEDEDESKKHAELLALPPHGSEVYVGGISQDASEEDLKSFCESVGEVTEVRIMKGKDSG 93

Query: 1313 ENKGYAFVTFRTKDLAAKAIEDLNNTEFQGKRIKCSTSQAKHKLFIGNVPRSWGEDDLKK 1134
            ENKG+AFVTFR  +LA+KAIE+LNNTEF+G++IKCSTSQAKH+LFIGNVPRSWGE+D+KK
Sbjct: 94   ENKGFAFVTFRNVELASKAIEELNNTEFKGRKIKCSTSQAKHRLFIGNVPRSWGEEDIKK 153

Query: 1133 IVTEIGPGVNAIELLKDPQNSSRNRGFAFIDYYNHACAEYSRQKMSIPKFKLESNAPTVS 954
            +VTEIGPGV A+EL+KD +NSS NRGFAFIDYYNHACAEYSRQKM  PKFKL++NAPTVS
Sbjct: 154  VVTEIGPGVTAVELVKDMKNSSNNRGFAFIDYYNHACAEYSRQKMMNPKFKLDNNAPTVS 213

Query: 953  WADPKNAESSAASQVKAVYVKNLPKNVNQDQLRELFEHHGEITKVVLPPAKPGQEKNRFG 774
            WADPKNA+SS ASQVKAVYVKNLPKN+ QDQL++LFEHHG+ITKVVLPPAK GQEK+R G
Sbjct: 214  WADPKNADSSPASQVKAVYVKNLPKNITQDQLKQLFEHHGKITKVVLPPAKSGQEKSRIG 273

Query: 773  FVHFAERSSAMKALKNTEKYELDGQVLECSLAKPQNDGKANG--SAQKSSLLPSYPPRMX 600
            FVHFAERSSAMKALKNTEKYE+DGQVLECSLAKPQ D K+ G  ++QKS LL SYPPR+ 
Sbjct: 274  FVHFAERSSAMKALKNTEKYEIDGQVLECSLAKPQADQKSVGGSNSQKSGLLSSYPPRV- 332

Query: 599  XXXXXXXXXXXXXXXXXXXXXXGFGQPLIYGRGPTPSGMAMMPMLLPDGRIGYVLQQPGA 420
                                  GF QPLIYGRGPTP+GMAMMPMLLPDGRIGYVLQQPGA
Sbjct: 333  ---GYGFVGGAYGALGAGYGTAGFAQPLIYGRGPTPAGMAMMPMLLPDGRIGYVLQQPGA 389

Query: 419  QPHTPP 402
            QPHTPP
Sbjct: 390  QPHTPP 395


>ref|XP_002275366.1| PREDICTED: heterogeneous nuclear ribonucleoprotein Q-like [Vitis
            vinifera]
          Length = 503

 Score =  578 bits (1489), Expect = e-162
 Identities = 284/365 (77%), Positives = 319/365 (87%), Gaps = 2/365 (0%)
 Frame = -2

Query: 1490 VEDDEESRKHAELLAIPPHGSEVYVGGIPHDASEKDLKGFCESVGEVTEVRMMKGKDSRE 1311
            +ED++ES+KHAELLA+PPHGSEVYVGGI  DASE+DLK FCESVGEVTEVR+MKGKDS E
Sbjct: 104  IEDEDESKKHAELLALPPHGSEVYVGGISQDASEEDLKSFCESVGEVTEVRIMKGKDSGE 163

Query: 1310 NKGYAFVTFRTKDLAAKAIEDLNNTEFQGKRIKCSTSQAKHKLFIGNVPRSWGEDDLKKI 1131
            NKG+AFVTFR  +LA+KAIE+LNNTEF+G++IKCSTSQAKH+LFIGNVPRSWGE+D+KK+
Sbjct: 164  NKGFAFVTFRNVELASKAIEELNNTEFKGRKIKCSTSQAKHRLFIGNVPRSWGEEDIKKV 223

Query: 1130 VTEIGPGVNAIELLKDPQNSSRNRGFAFIDYYNHACAEYSRQKMSIPKFKLESNAPTVSW 951
            VTEIGPGV A+EL+KD +NSS NRGFAFIDYYNHACAEYSRQKM  PKFKL++NAPTVSW
Sbjct: 224  VTEIGPGVTAVELVKDMKNSSNNRGFAFIDYYNHACAEYSRQKMMNPKFKLDNNAPTVSW 283

Query: 950  ADPKNAESSAASQVKAVYVKNLPKNVNQDQLRELFEHHGEITKVVLPPAKPGQEKNRFGF 771
            ADPKNA+SS ASQVKAVYVKNLPKN+ QDQL++LFEHHG+ITKVVLPPAK GQEK+R GF
Sbjct: 284  ADPKNADSSPASQVKAVYVKNLPKNITQDQLKQLFEHHGKITKVVLPPAKSGQEKSRIGF 343

Query: 770  VHFAERSSAMKALKNTEKYELDGQVLECSLAKPQNDGKANG--SAQKSSLLPSYPPRMXX 597
            VHFAERSSAMKALKNTEKYE+DGQVLECSLAKPQ D K+ G  ++QKS LL SYPPR+  
Sbjct: 344  VHFAERSSAMKALKNTEKYEIDGQVLECSLAKPQADQKSVGGSNSQKSGLLSSYPPRV-- 401

Query: 596  XXXXXXXXXXXXXXXXXXXXXGFGQPLIYGRGPTPSGMAMMPMLLPDGRIGYVLQQPGAQ 417
                                 GF QPLIYGRGPTP+GMAMMPMLLPDGRIGYVLQQPGAQ
Sbjct: 402  --GYGFVGGAYGALGAGYGTAGFAQPLIYGRGPTPAGMAMMPMLLPDGRIGYVLQQPGAQ 459

Query: 416  PHTPP 402
            PHTPP
Sbjct: 460  PHTPP 464


>ref|XP_004166457.1| PREDICTED: uncharacterized protein LOC101228216 [Cucumis sativus]
          Length = 828

 Score =  569 bits (1466), Expect = e-160
 Identities = 277/365 (75%), Positives = 319/365 (87%), Gaps = 1/365 (0%)
 Frame = -2

Query: 1490 VEDDEESRKHAELLAIPPHGSEVYVGGIPHDASEKDLKGFCESVGEVTEVRMMKGKDSRE 1311
            + D++E++KHAELLA+PPHGSEVYVGGIP D+SE DL+ FCES+GEVTEVR+M+ K+S E
Sbjct: 419  INDEDETKKHAELLALPPHGSEVYVGGIPQDSSEDDLRRFCESIGEVTEVRVMRSKESNE 478

Query: 1310 NKGYAFVTFRTKDLAAKAIEDLNNTEFQGKRIKCSTSQAKHKLFIGNVPRSWGEDDLKKI 1131
            NKG+AFVTFR+ +LA+KAI++LNNTEF+GK+IKCS+SQAKH+LFIGNVPRSWGE+DLKK+
Sbjct: 479  NKGFAFVTFRSVELASKAIDELNNTEFKGKKIKCSSSQAKHRLFIGNVPRSWGEEDLKKV 538

Query: 1130 VTEIGPGVNAIELLKDPQNSSRNRGFAFIDYYNHACAEYSRQKMSIPKFKLESNAPTVSW 951
            VTEIGPGV A+EL+KD +N+S NRGFAFIDYYNHACAEYSRQKM  PKFKL+ NAPTVSW
Sbjct: 539  VTEIGPGVTAVELVKDMKNTSNNRGFAFIDYYNHACAEYSRQKMMNPKFKLDDNAPTVSW 598

Query: 950  ADPKNAESSAASQVKAVYVKNLPKNVNQDQLRELFEHHGEITKVVLPPAKPGQEKNRFGF 771
            ADPKNA+SSAASQVKAVYVKNLPKNV Q+QL++LF+HHG+ITKVVLPPAK GQEKNR GF
Sbjct: 599  ADPKNADSSAASQVKAVYVKNLPKNVTQEQLKKLFDHHGKITKVVLPPAKSGQEKNRIGF 658

Query: 770  VHFAERSSAMKALKNTEKYELDGQVLECSLAKPQNDGKANGS-AQKSSLLPSYPPRMXXX 594
            VHF+ERSSAMKALKNTEKYELDGQVLECSLAKPQ D K+ GS +QKS LLP+YPPR+   
Sbjct: 659  VHFSERSSAMKALKNTEKYELDGQVLECSLAKPQADQKSGGSNSQKSGLLPNYPPRV--- 715

Query: 593  XXXXXXXXXXXXXXXXXXXXGFGQPLIYGRGPTPSGMAMMPMLLPDGRIGYVLQQPGAQP 414
                                GFGQPLIYGRGPTP+GMAMMPMLLPDGRIGYVLQQPG+Q 
Sbjct: 716  -GYGFVGGAYGAVNAGYGGSGFGQPLIYGRGPTPAGMAMMPMLLPDGRIGYVLQQPGSQM 774

Query: 413  HTPPP 399
             TPPP
Sbjct: 775  LTPPP 779


>ref|XP_004140160.1| PREDICTED: uncharacterized protein LOC101218373 [Cucumis sativus]
          Length = 784

 Score =  569 bits (1466), Expect = e-160
 Identities = 277/365 (75%), Positives = 319/365 (87%), Gaps = 1/365 (0%)
 Frame = -2

Query: 1490 VEDDEESRKHAELLAIPPHGSEVYVGGIPHDASEKDLKGFCESVGEVTEVRMMKGKDSRE 1311
            + D++E++KHAELLA+PPHGSEVYVGGIP D+SE DL+ FCES+GEVTEVR+M+ K+S E
Sbjct: 375  INDEDETKKHAELLALPPHGSEVYVGGIPQDSSEDDLRRFCESIGEVTEVRVMRSKESNE 434

Query: 1310 NKGYAFVTFRTKDLAAKAIEDLNNTEFQGKRIKCSTSQAKHKLFIGNVPRSWGEDDLKKI 1131
            NKG+AFVTFR+ +LA+KAI++LNNTEF+GK+IKCS+SQAKH+LFIGNVPRSWGE+DLKK+
Sbjct: 435  NKGFAFVTFRSVELASKAIDELNNTEFKGKKIKCSSSQAKHRLFIGNVPRSWGEEDLKKV 494

Query: 1130 VTEIGPGVNAIELLKDPQNSSRNRGFAFIDYYNHACAEYSRQKMSIPKFKLESNAPTVSW 951
            VTEIGPGV A+EL+KD +N+S NRGFAFIDYYNHACAEYSRQKM  PKFKL+ NAPTVSW
Sbjct: 495  VTEIGPGVTAVELVKDMKNTSNNRGFAFIDYYNHACAEYSRQKMMNPKFKLDDNAPTVSW 554

Query: 950  ADPKNAESSAASQVKAVYVKNLPKNVNQDQLRELFEHHGEITKVVLPPAKPGQEKNRFGF 771
            ADPKNA+SSAASQVKAVYVKNLPKNV Q+QL++LF+HHG+ITKVVLPPAK GQEKNR GF
Sbjct: 555  ADPKNADSSAASQVKAVYVKNLPKNVTQEQLKKLFDHHGKITKVVLPPAKSGQEKNRIGF 614

Query: 770  VHFAERSSAMKALKNTEKYELDGQVLECSLAKPQNDGKANGS-AQKSSLLPSYPPRMXXX 594
            VHF+ERSSAMKALKNTEKYELDGQVLECSLAKPQ D K+ GS +QKS LLP+YPPR+   
Sbjct: 615  VHFSERSSAMKALKNTEKYELDGQVLECSLAKPQADQKSGGSNSQKSGLLPNYPPRV--- 671

Query: 593  XXXXXXXXXXXXXXXXXXXXGFGQPLIYGRGPTPSGMAMMPMLLPDGRIGYVLQQPGAQP 414
                                GFGQPLIYGRGPTP+GMAMMPMLLPDGRIGYVLQQPG+Q 
Sbjct: 672  -GYGFVGGAYGAVNAGYGGSGFGQPLIYGRGPTPAGMAMMPMLLPDGRIGYVLQQPGSQM 730

Query: 413  HTPPP 399
             TPPP
Sbjct: 731  LTPPP 735


>ref|XP_002308472.1| predicted protein [Populus trichocarpa] gi|222854448|gb|EEE91995.1|
            predicted protein [Populus trichocarpa]
          Length = 440

 Score =  561 bits (1446), Expect = e-157
 Identities = 273/379 (72%), Positives = 323/379 (85%), Gaps = 2/379 (0%)
 Frame = -2

Query: 1529 ASPGADQDMKASDVEDDEESRKHAELLAIPPHGSEVYVGGIPHDASEKDLKGFCESVGEV 1350
            AS  AD    +   E+++E RKH+ELLA+PPHGSEVY+GGIP DASE+DLK FCES+GEV
Sbjct: 35   ASDEADSPKGSDGDEEEDEHRKHSELLALPPHGSEVYLGGIPPDASEEDLKEFCESIGEV 94

Query: 1349 TEVRMMKGKDSRENKGYAFVTFRTKDLAAKAIEDLNNTEFQGKRIKCSTSQAKHKLFIGN 1170
            TE+R+MKGKDS E+KGYAFVTFRTK+LA+KAIE+LNNTEF+GK++KCSTSQA H+LFIGN
Sbjct: 95   TEIRIMKGKDSSESKGYAFVTFRTKELASKAIEELNNTEFKGKKVKCSTSQANHRLFIGN 154

Query: 1169 VPRSWGEDDLKKIVTEIGPGVNAIELLKDPQNSSRNRGFAFIDYYNHACAEYSRQKMSIP 990
            VPR+WGE+D+KK V + GPGVN++ELLKDPQN SRNRGFAFI+YYNHACAEYSR+ MS P
Sbjct: 155  VPRNWGEEDMKKAVKKTGPGVNSVELLKDPQNPSRNRGFAFIEYYNHACAEYSRKMMSSP 214

Query: 989  KFKLESNAPTVSWADPKNAESSAASQVKAVYVKNLPKNVNQDQLRELFEHHGEITKVVLP 810
            +FKL+ NAPTVSWADPKNA SSAASQVKAVYVKNLP+++NQD+LR+LFEHHG++TKVVLP
Sbjct: 215  EFKLDDNAPTVSWADPKNAGSSAASQVKAVYVKNLPEDINQDRLRQLFEHHGKVTKVVLP 274

Query: 809  PAKPGQEKNRFGFVHFAERSSAMKALKNTEKYELDGQVLECSLAKPQNDGKANG--SAQK 636
            PAKPG EK+RFGFVHFAERSSAMKALKNTEKY++DGQVL+CSLAKPQ D K++G  ++QK
Sbjct: 275  PAKPGHEKSRFGFVHFAERSSAMKALKNTEKYKIDGQVLDCSLAKPQADLKSSGGPNSQK 334

Query: 635  SSLLPSYPPRMXXXXXXXXXXXXXXXXXXXXXXXGFGQPLIYGRGPTPSGMAMMPMLLPD 456
            SS   S+PPR+                       GF QP+IYGRGPTP+GM+MMPMLLPD
Sbjct: 335  SSPHSSFPPRV----GYSLVGSSYGALGAGFGAAGFAQPVIYGRGPTPAGMSMMPMLLPD 390

Query: 455  GRIGYVLQQPGAQPHTPPP 399
            GRIGYVLQQPG Q H+PPP
Sbjct: 391  GRIGYVLQQPGMQMHSPPP 409


Top