BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00005836
         (515 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003545870.1| PREDICTED: F-box/LRR-repeat protein At3g1471...    68   9e-10
ref|XP_003541805.1| PREDICTED: FBD-associated F-box protein At3g...    63   3e-08
emb|CBI32919.3| unnamed protein product [Vitis vinifera]               61   8e-08

>ref|XP_003545870.1| PREDICTED: F-box/LRR-repeat protein At3g14710-like [Glycine max]
          Length = 453

 Score = 67.8 bits (164), Expect = 9e-10
 Identities = 57/179 (31%), Positives = 93/179 (51%), Gaps = 8/179 (4%)
 Frame = +1

Query: 1   IKVYAESLVSLELDCNMAYELSLYNLFSLFNASIDICSTR-------KIGQRVNKLLKAI 159
           IK++A +L       ++  E+ L N  S+ +AS+ I +         K+G +V+KLL  I
Sbjct: 243 IKIFAPNLADFSYGGDLEQEIILLNSASIHSASVVIVADEDKMTNVGKLGFQVHKLLAQI 302

Query: 160 CDVKDLRLSDDSIETLSKASLTENLLKFSNLKYVRLSVGVDWFYGEYLTELLHYLPSMEC 339
            +VK L+L    +   ++   T +L  FS L Y++L+       GE L  +L+  P +  
Sbjct: 303 REVKQLKLLFYKVLMHARDIFT-HLPAFSRLSYLQLNEVT----GEALLNILNNCPILSS 357

Query: 340 LFIDYGLGVCEFEEDGV-TDQATPRDFLSNLKLVEVWEFSGSKNELCFLKFLLKNARAL 513
           L +  G  V E  +D V T  + P+ FLS+LK+ +  EF+  ++EL   KF+L NA  L
Sbjct: 358 LVLQNG--VSESNKDHVLTSASVPQCFLSSLKVFQFKEFNVREHELLLAKFVLANAAVL 414


>ref|XP_003541805.1| PREDICTED: FBD-associated F-box protein At3g52670-like [Glycine
           max]
          Length = 639

 Score = 62.8 bits (151), Expect = 3e-08
 Identities = 44/132 (33%), Positives = 71/132 (53%)
 Frame = +1

Query: 118 RKIGQRVNKLLKAICDVKDLRLSDDSIETLSKASLTENLLKFSNLKYVRLSVGVDWFYGE 297
           R++G +V+KLL  IC+V+ L+L    +  +  A +  +L  F  L Y+ L+       GE
Sbjct: 2   RRLGFQVHKLLTQICEVEQLKLLLYKV-LVHAADIFTHLPVFGKLTYLLLNEVT----GE 56

Query: 298 YLTELLHYLPSMECLFIDYGLGVCEFEEDGVTDQATPRDFLSNLKLVEVWEFSGSKNELC 477
            L  LLH  P +  L +  G  V +  ED +T  + P+ FLS+LK+ +   F+  ++EL 
Sbjct: 57  ALLNLLHNSPMLNTLILQNG--VFDLNEDMLTSASVPQCFLSSLKVFQFKGFNVHEHELL 114

Query: 478 FLKFLLKNARAL 513
             KF++ NA  L
Sbjct: 115 LAKFVMANATVL 126


>emb|CBI32919.3| unnamed protein product [Vitis vinifera]
          Length = 411

 Score = 61.2 bits (147), Expect = 8e-08
 Identities = 59/178 (33%), Positives = 91/178 (51%), Gaps = 9/178 (5%)
 Frame = +1

Query: 7   VYAESLVSLELDCNMAYELSLYNLFSLFNASIDICST-RKIGQ------RVNKLLKAICD 165
           V A +L  L +   ++ +  + NL SL  A +++  T R I        R+ +LL+ I +
Sbjct: 190 VDAPNLEYLSITDFVSEDYLMSNLSSLVKAYVNVGPTIRGIDDQILYRGRIYELLRGISN 249

Query: 166 VKDLRLSDDSIETLSKASLTENLLKFSNLKYVRLSVGVDWFYG-EYLTELLHYLPSMECL 342
           VK L LS +++ +LS       L  F ++   RL + VD+ YG E+L E L   P++E L
Sbjct: 250 VKHLSLSGETLHSLSGMFCGYELPAFHSV--TRLELEVDYGYGLEFLKEFLDTSPNLEIL 307

Query: 343 FID-YGLGVCEFEEDGVTDQATPRDFLSNLKLVEVWEFSGSKNELCFLKFLLKNARAL 513
            ++      CE EE  +  Q  P     +L  VE+ +F G   EL  ++FLLKNAR L
Sbjct: 308 ILENVNKDECEIEEWTLPLQV-PTCVELHLNEVEIKKFDGLDYELGAIEFLLKNARVL 364