BLASTX nr result

ID: Coptis21_contig00005791 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00005791
         (1491 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002531948.1| conserved hypothetical protein [Ricinus comm...   280   7e-73
ref|XP_002282479.1| PREDICTED: uncharacterized protein LOC100256...   266   1e-68
ref|XP_002324630.1| predicted protein [Populus trichocarpa] gi|2...   243   1e-61
ref|XP_002308058.1| predicted protein [Populus trichocarpa] gi|2...   232   2e-58
ref|XP_003541480.1| PREDICTED: uncharacterized protein LOC100802...   228   2e-57

>ref|XP_002531948.1| conserved hypothetical protein [Ricinus communis]
            gi|223528394|gb|EEF30430.1| conserved hypothetical
            protein [Ricinus communis]
          Length = 393

 Score =  280 bits (716), Expect = 7e-73
 Identities = 170/377 (45%), Positives = 235/377 (62%), Gaps = 24/377 (6%)
 Frame = +1

Query: 175  KEDLSELGKTLTRRLWGVASFLAPPPSTNAPTISSTEEADSQT--LVGIRNDFAEXXXXX 348
            K+D+S +  +++R+L GVA+FLAPPPS  +P+ + +E  DSQ+  L GIRND AE     
Sbjct: 22   KDDISVISDSISRQLRGVANFLAPPPSPPSPSENKSEPLDSQSQALQGIRNDLAEIGGSL 81

Query: 349  XXXXXXXXXNKAVNEISRLASNILQF---NXXXXXXXXXEGLGSGVVGISEEALEFVREI 519
                     NKAV EIS+  S++LQF   +         E     V GI+ E ++FV+EI
Sbjct: 82   KSGLSLLSTNKAVTEISKFTSSLLQFQSNSNYRDNDDDYEDDDDDVAGITNEVIDFVKEI 141

Query: 520  SLRPQCWTDFPLALDDIDFDMSSAQREHASIVEHLAPSLADLKMNLCPSNMKEEHFWMVY 699
            S RP+CWTDFPL+L   DF MS AQREHASIVEH  PSL  L+ NL   +M +E FW++Y
Sbjct: 142  SSRPECWTDFPLSLH-YDFKMSDAQREHASIVEHFVPSLKALRANL-HGHMGDEQFWLIY 199

Query: 700  FILLHPRLHKHDVELLSTAQIVETRDILLQTLQKRTNAQLQTSTADGLSLEVNENGNDIQ 879
            FILL PRL++HD+E+LST QIVETR+ILLQ LQ + N +++ S  D  SL ++++ + I 
Sbjct: 200  FILLLPRLNEHDIEILSTPQIVETRNILLQKLQNKKNLKVENS--DPASLHISQDSSKIT 257

Query: 880  EE------RSSVEEKKVFGKTVIAEDQEDLDVDKWLEE-DVETGPSFNSRNQLGNEQDVS 1038
            E           E  ++   T   E  ++   D+WL+E ++ T  + + + +L +E+DVS
Sbjct: 258  ERAEDNIPSQGKEVTEIANATGRLEIDDEESADQWLKETEINTDTTLDGQKKLEHEEDVS 317

Query: 1039 FSDLEDDDNDTSS----SNPAKNI-HLSSPNESSGWVQLNENS-------KPSQPASREK 1182
            FSDLE+DDND +S    S  A+ I  + SP+ SS WVQLNE+S       K  Q  SREK
Sbjct: 318  FSDLENDDNDLASRLSGSKKAQEITRVPSPSGSSDWVQLNESSETQAGLQKARQSISREK 377

Query: 1183 GSESEESNEWLTVDEFD 1233
             S+  ESN+WL VD+FD
Sbjct: 378  DSDG-ESNDWLKVDDFD 393


>ref|XP_002282479.1| PREDICTED: uncharacterized protein LOC100256011 [Vitis vinifera]
            gi|297739010|emb|CBI28255.3| unnamed protein product
            [Vitis vinifera]
          Length = 390

 Score =  266 bits (680), Expect = 1e-68
 Identities = 170/381 (44%), Positives = 220/381 (57%), Gaps = 22/381 (5%)
 Frame = +1

Query: 172  VKEDLSELGKTLTRRLWGVASFLAPPPS-------TNAPTISSTEEADSQTLVGIRNDFA 330
            V+EDLS   +T+ R+L GVA+FLAPPPS         AP+ SS+  + S TL GIRND A
Sbjct: 25   VREDLSVFSQTIGRQLRGVAAFLAPPPSPPSSPSPVAAPSDSSSSASSSPTLRGIRNDLA 84

Query: 331  EXXXXXXXXXXXXXXNKAVNEISRLASNILQFNXXXXXXXXXEGLGSGVVGISEEALEFV 510
            E                      +  SN+ Q           E    GV GI+EE L FV
Sbjct: 85   EIGGSFKSGL-------------KTFSNLFQSQPGDADDECLEDY-DGVAGITEEVLHFV 130

Query: 511  REISLRPQCWTDFPLALDDIDFDMSSAQREHASIVEHLAPSLADLKMNLCPSNMKEEHFW 690
             ++S RP+CWTDFP ALDD DF MS  QREHAS +E LAPS ADL++ LC S M +  FW
Sbjct: 131  SQLSTRPECWTDFPSALDD-DFFMSDIQREHASTIERLAPSFADLRLQLC-SYMSDGQFW 188

Query: 691  MVYFILLHPRLHKHDVELLSTAQIVETRDILLQTLQKRTNAQLQTSTADGLSLEVNENGN 870
            M+YFILL PRL+ HD +LLST +IVE RD+LL  LQ + +A++ +  +   S E +   +
Sbjct: 189  MIYFILLLPRLNVHDSKLLSTPKIVEARDVLLLKLQNKRDAKVSSENSMVDSSEGSSKVS 248

Query: 871  DIQEERSSVEEKKVFGKTVIAEDQEDLDVDKWL-----EEDVETGPSFNSRNQLGNEQDV 1035
                E S  +EK+V  ++V    + D    +       EED +TG S  +  +L NE DV
Sbjct: 249  RTLGEDSPSQEKEVLSESVSVAHEMDKGEQESTEQLLEEEDADTGNSVGAVKRLENEDDV 308

Query: 1036 SFSDLEDDDND----TSSSNPAKNIHLSSPNESSGWVQLNEN------SKPSQPASREKG 1185
            SFSDLEDDDND     S      +I +SSPN S+ WV+LNEN       +  Q  SRE+ 
Sbjct: 309  SFSDLEDDDNDLSRRLSGLRLKDDIRVSSPNGSNEWVKLNENCEIHGQQRTGQSTSRERD 368

Query: 1186 SESEESNEWLTVDEFDTESVG 1248
            SE EESN+WLTVD FD++S+G
Sbjct: 369  SEGEESNDWLTVD-FDSDSLG 388


>ref|XP_002324630.1| predicted protein [Populus trichocarpa] gi|222866064|gb|EEF03195.1|
            predicted protein [Populus trichocarpa]
          Length = 369

 Score =  243 bits (619), Expect = 1e-61
 Identities = 157/377 (41%), Positives = 218/377 (57%), Gaps = 23/377 (6%)
 Frame = +1

Query: 172  VKEDLSELGKTLTRRLWGVASFLAPPPSTNAPTISSTEEA----------DSQTLVGIRN 321
            V++DL  +G ++ R+L GVA+FLAPPP    P  S+T+ A           SQ L+GIRN
Sbjct: 25   VQDDLLVIGDSIGRQLRGVANFLAPPPP---PPPSNTQAAKPQPFDSSSQSSQALLGIRN 81

Query: 322  DFAEXXXXXXXXXXXXXXNKAVNEISRLASNILQFNXXXXXXXXXEGLGSGVVGISEEAL 501
            D AE              +   + +S+  SN LQF             G  V GI+EE +
Sbjct: 82   DLAEIG------------DSLKSGLSKFTSNFLQFKDINSKNSD----GDDVAGINEEVI 125

Query: 502  EFVREISLRPQCWTDFPLALDDIDFDMSSAQREHASIVEHLAPSLADLKMNLCPSNMKEE 681
             FV+EISLRP+CW DFPL L + DF M+ AQREH   VEH  PSLA L+ NL  S M + 
Sbjct: 126  GFVKEISLRPECWIDFPLPLQN-DFRMTDAQREHVLNVEHFVPSLAQLRNNL-RSEMGDG 183

Query: 682  HFWMVYFILLHPRLHKHDVELLSTAQIVETRDILLQTLQKRTNAQLQTS--TADGLSLEV 855
             FWMVYFILL PRL++HD E+LST QIVETR++LLQ LQ + N ++++S  +  G   E+
Sbjct: 184  RFWMVYFILLIPRLNEHDFEVLSTPQIVETRNLLLQKLQNKRNVKVESSKNSKSGTQGEI 243

Query: 856  NENGNDIQEERSSVEEKKVFGKTVIAEDQEDLDVDKWLEEDVETGPSFNSRNQLGNEQDV 1035
              +  +I E   + E  K+           + +  ++ +E ++   S ++  +L +EQDV
Sbjct: 244  TTSQEEITEIADATEGLKI----------NEENSRQFSKEKIDNSTSMDNHKKLEDEQDV 293

Query: 1036 SFSDLEDDDND----TSSSNPAKNIHLSSPNESSGWVQLNENS-------KPSQPASREK 1182
            SFSDLEDDD+D     S+S  A++I   SP+ SS W+QLNE S       K  Q  SR+K
Sbjct: 294  SFSDLEDDDSDFSIRLSASRKARSIRAPSPSGSSDWIQLNEGSDTQGGPPKARQSFSRDK 353

Query: 1183 GSESEESNEWLTVDEFD 1233
             S++ ES++W  VDE+D
Sbjct: 354  DSDA-ESSDWHKVDEYD 369


>ref|XP_002308058.1| predicted protein [Populus trichocarpa] gi|222854034|gb|EEE91581.1|
            predicted protein [Populus trichocarpa]
          Length = 371

 Score =  232 bits (591), Expect = 2e-58
 Identities = 154/369 (41%), Positives = 217/369 (58%), Gaps = 15/369 (4%)
 Frame = +1

Query: 172  VKEDLSELGKTLTRRLWGVASFLAPPPSTNAPTISSTEEADSQT---LVGIRNDFAEXXX 342
            VK+ LS +G ++ R+L GVA+FLAPPP +      S     SQ+   L+GIRND AE   
Sbjct: 25   VKDHLSAIGVSIGRQLRGVANFLAPPPPSRPEAAKSQPSDSSQSSRALIGIRNDLAEIGD 84

Query: 343  XXXXXXXXXXXNKAVNEISRLASNILQFNXXXXXXXXXEG-LGSGVVGISEEALEFVREI 519
                             +S+L  N L+F          EG    GV GI+EE + FV+EI
Sbjct: 85   SLKYG------------LSKLTFNFLRFKDDDHNNSSQEGDYEDGVAGINEEVIGFVKEI 132

Query: 520  SLRPQCWTDFPLALDDIDFDMSSAQREHASIVEHLAPSLADLKMNLCPSNMKEEHFWMVY 699
            SLRP+ W DFPL L + DF M+ AQREHAS +E   PSLA L+ NL  S   +  FWMVY
Sbjct: 133  SLRPEYWVDFPLPLQN-DFRMTDAQREHASNIERFVPSLAQLRYNL-RSETGDGRFWMVY 190

Query: 700  FILLHPRLHKHDVELLSTAQIVETRDILLQTLQKRTNAQLQTSTADGLSLEVNENGNDIQ 879
            FILL PRL++ D E+LST QIVETR++LL+ L+ + N +L+ S+ + +S    EN    +
Sbjct: 191  FILLIPRLNEGDFEILSTPQIVETRNVLLEKLRNKKNVKLE-SSKNSISETQGENTTS-R 248

Query: 880  EERSSVEEKKVFGKTVIAEDQEDLDVDKWLEEDVETGPSFNSRNQLGNEQDVSFSDLEDD 1059
            EE + +    V+    +  + E+ +  ++L+E ++   S ++R +L  ++DVSFSDLEDD
Sbjct: 249  EEVAGI----VYATEGLKINDEE-NSKQFLKEQIDNSISMDNRKKLEGKEDVSFSDLEDD 303

Query: 1060 DNDT----SSSNPAKNIHLSSPNESSGWVQLNENS-------KPSQPASREKGSESEESN 1206
             +D+    S+S  A++I   SP+ SS WVQLNE+S       K  Q  SR+K S++ ES 
Sbjct: 304  YSDSSTRLSASRKAQSIRAPSPSGSSDWVQLNESSDILGGLCKARQSFSRDKDSDA-EST 362

Query: 1207 EWLTVDEFD 1233
            +W  VDEFD
Sbjct: 363  DWHKVDEFD 371


>ref|XP_003541480.1| PREDICTED: uncharacterized protein LOC100802079 [Glycine max]
          Length = 397

 Score =  228 bits (582), Expect = 2e-57
 Identities = 153/375 (40%), Positives = 206/375 (54%), Gaps = 21/375 (5%)
 Frame = +1

Query: 172  VKEDLSELGKTLTRRLWGVASFLAPPPSTNAPTISST-------EEADSQTLVGIRNDFA 330
            VK+D+S + +       GVA+FLAPPP +++ + SS+       + + SQ L GIRND  
Sbjct: 38   VKDDISHIFR-------GVANFLAPPPPSSSSSSSSSSSSSSAGDSSSSQALSGIRNDLV 90

Query: 331  EXXXXXXXXXXXXXXNKAVNEISRLASNILQFNXXXXXXXXXEGLGSGVVGISEEALEFV 510
            E              NKAV  IS+LAS +LQ           +     V G +E+ + FV
Sbjct: 91   EIGGSFKNSLSRISSNKAVTGISKLASQLLQLEPDQQRSNDDDA----VPGTTEDVVRFV 146

Query: 511  REISLRPQCWTDFPLALDDIDFDMSSAQREHASIVEHLAPSLADLKMNLCPSNMKEEHFW 690
            +EIS RPQCWT+FPL L + DF MS++QREHA  +E L P    L++NLC S M  E FW
Sbjct: 147  KEISARPQCWTEFPLPLHN-DFSMSNSQREHALAIEQLVPEFIALRLNLC-SYMNVEKFW 204

Query: 691  MVYFILLHPRLHKHDVELLSTAQIVETRDILLQTLQKRTNAQLQTSTADGLSLEVNENGN 870
            M+YF+L+ PRL++HD E LST +IVE RD+LLQ L +R N Q              E   
Sbjct: 205  MIYFLLILPRLNQHDFERLSTPKIVEARDVLLQKLGERKNLQAGEPENPRTVDTYQEGRE 264

Query: 871  DIQEERSSVEEKKVFGKTVIAEDQEDLDVD------KWLEEDVETGPSFNSRNQLGNEQD 1032
            D   E  S E+ ++   T +    E L+VD      KWLE+      S  S  +L  E+D
Sbjct: 265  DRGTESISFEQNQIL--TEVTNAVEGLEVDDTVSTEKWLEDTDIDASSLASCTKLQQEED 322

Query: 1033 VSFSDLEDD----DNDTSSSNPAKNIHLSSP-NESSGWVQLNENSKPS--QPASREKGSE 1191
            VSFSDLEDD     +  S    A +I  SSP   +S WV+L E+S+    +   R KG +
Sbjct: 323  VSFSDLEDDRSYSSDKLSGYREAHDIRGSSPEGATSDWVRLRESSERDGRKKVIRLKGKD 382

Query: 1192 SE-ESNEWLTVDEFD 1233
            SE ESN+WLTVD+F+
Sbjct: 383  SEDESNDWLTVDDFN 397


Top