BLASTX nr result

ID: Coptis21_contig00005766 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00005766
         (237 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003530527.1| PREDICTED: protein-tyrosine phosphatase mito...   105   3e-21
ref|XP_002514193.1| Protein-tyrosine phosphatase mitochondrial 1...    92   6e-17
ref|XP_002283341.2| PREDICTED: protein-tyrosine phosphatase mito...    90   2e-16
emb|CAN61438.1| hypothetical protein VITISV_033771 [Vitis vinifera]    90   2e-16
ref|XP_003630688.1| Protein-tyrosine phosphatase mitochondrial [...    87   1e-15

>ref|XP_003530527.1| PREDICTED: protein-tyrosine phosphatase mitochondrial 1-like
           [Glycine max]
          Length = 282

 Score =  105 bits (263), Expect = 3e-21
 Identities = 56/78 (71%), Positives = 61/78 (78%)
 Frame = +3

Query: 3   VLLAPSQWKAVQEFGKCRPSLMASSFSGDEVLITKADLEGYHNMSDATKKLNIVAKAVKA 182
           VLLAPSQWKAVQ + K RPS +  S SGD VLITKADLEGYH+  DA  +L IV K  K 
Sbjct: 188 VLLAPSQWKAVQNYNKRRPSPLPYSPSGDAVLITKADLEGYHSTCDAGMELAIVPKMPKT 247

Query: 183 KPMIARLSCLFAALKVSG 236
           KPMIARLSCLFA+LKVSG
Sbjct: 248 KPMIARLSCLFASLKVSG 265


>ref|XP_002514193.1| Protein-tyrosine phosphatase mitochondrial 1, mitochondrial
           precursor, putative [Ricinus communis]
           gi|223546649|gb|EEF48147.1| Protein-tyrosine phosphatase
           mitochondrial 1, mitochondrial precursor, putative
           [Ricinus communis]
          Length = 284

 Score = 91.7 bits (226), Expect = 6e-17
 Identities = 52/81 (64%), Positives = 61/81 (75%), Gaps = 3/81 (3%)
 Frame = +3

Query: 3   VLLAPSQWKAVQEFGKCRPSLMASSFSGDEVLITKADLEGYHNMSD---ATKKLNIVAKA 173
           VLLAPSQWKAVQE+ + RP   A S S D VLITKADLEGYH+  D     K+L IV++ 
Sbjct: 190 VLLAPSQWKAVQEYSRRRPPPTAHSPSRDAVLITKADLEGYHSACDDDAIGKELAIVSR- 248

Query: 174 VKAKPMIARLSCLFAALKVSG 236
            K +PM+ARLSCLFA+LKVSG
Sbjct: 249 TKTRPMMARLSCLFASLKVSG 269


>ref|XP_002283341.2| PREDICTED: protein-tyrosine phosphatase mitochondrial 1-like
           isoform 1 [Vitis vinifera] gi|297738731|emb|CBI27976.3|
           unnamed protein product [Vitis vinifera]
          Length = 280

 Score = 90.1 bits (222), Expect = 2e-16
 Identities = 53/80 (66%), Positives = 62/80 (77%), Gaps = 2/80 (2%)
 Frame = +3

Query: 3   VLLAPSQWKAVQEFGKCRPSLMAS-SFSGDEVLITKADLEGYH-NMSDATKKLNIVAKAV 176
           VLLAPSQWKAVQE+ K + +   S S SGD VLITKADLEGY  N  DA K+L I+A+ V
Sbjct: 187 VLLAPSQWKAVQEYNKRQLATTTSYSPSGDAVLITKADLEGYQSNCDDAGKELAIIARVV 246

Query: 177 KAKPMIARLSCLFAALKVSG 236
           +A+PM ARLSCLFA+LK SG
Sbjct: 247 RARPM-ARLSCLFASLKFSG 265


>emb|CAN61438.1| hypothetical protein VITISV_033771 [Vitis vinifera]
          Length = 271

 Score = 90.1 bits (222), Expect = 2e-16
 Identities = 53/80 (66%), Positives = 62/80 (77%), Gaps = 2/80 (2%)
 Frame = +3

Query: 3   VLLAPSQWKAVQEFGKCRPSLMAS-SFSGDEVLITKADLEGYH-NMSDATKKLNIVAKAV 176
           VLLAPSQWKAVQE+ K + +   S S SGD VLITKADLEGY  N  DA K+L I+A+ V
Sbjct: 178 VLLAPSQWKAVQEYNKRQLATTTSYSPSGDAVLITKADLEGYQSNCDDAGKELAIIARVV 237

Query: 177 KAKPMIARLSCLFAALKVSG 236
           +A+PM ARLSCLFA+LK SG
Sbjct: 238 RARPM-ARLSCLFASLKFSG 256


>ref|XP_003630688.1| Protein-tyrosine phosphatase mitochondrial [Medicago truncatula]
           gi|355524710|gb|AET05164.1| Protein-tyrosine phosphatase
           mitochondrial [Medicago truncatula]
          Length = 309

 Score = 87.4 bits (215), Expect = 1e-15
 Identities = 54/105 (51%), Positives = 60/105 (57%), Gaps = 27/105 (25%)
 Frame = +3

Query: 3   VLLAPSQWKAVQEFGKCRPSLMASSFSGDEVL---------------------------I 101
           VLLAPSQWKAVQ + K RP  +  S SGD VL                           I
Sbjct: 188 VLLAPSQWKAVQNYYKQRPCPLPCSPSGDAVLKHKDPVQNYNKQRPCPLPHSPSGDTVVI 247

Query: 102 TKADLEGYHNMSDATKKLNIVAKAVKAKPMIARLSCLFAALKVSG 236
           TK DLEGYH+ SD + +L IV K  K KPMIARLSCLFA+LKVSG
Sbjct: 248 TKDDLEGYHSTSDTSIELAIVPKVPKTKPMIARLSCLFASLKVSG 292


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