BLASTX nr result

ID: Coptis21_contig00005737 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00005737
         (910 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ADN33776.1| 60S ribosomal protein l9 [Cucumis melo subsp. melo]    337   3e-90
ref|XP_002518960.1| 60S ribosomal protein L9, putative [Ricinus ...   336   4e-90
ref|XP_004145906.1| PREDICTED: 60S ribosomal protein L9-like [Cu...   335   7e-90
gb|ABB29957.1| unknown [Solanum tuberosum]                            335   7e-90
ref|XP_002276785.1| PREDICTED: 60S ribosomal protein L9 [Vitis v...   334   2e-89

>gb|ADN33776.1| 60S ribosomal protein l9 [Cucumis melo subsp. melo]
          Length = 194

 Score =  337 bits (863), Expect = 3e-90
 Identities = 167/194 (86%), Positives = 182/194 (93%)
 Frame = +3

Query: 42  MKTILSSETMDIPDGVKIKVNAKMITVEGPKGKLVRNFKHLNLDFQLIKNKENGKRQLKV 221
           MKTILSSETMDIPDGVKIKVNAK+I VEGP+GKLVRNFKHLNLDFQLI +++ GK++LK+
Sbjct: 1   MKTILSSETMDIPDGVKIKVNAKIIEVEGPRGKLVRNFKHLNLDFQLITDEDTGKKKLKI 60

Query: 222 DSWFGSRKASASIRTALSHVGNLINGVTKGYRYKMRFVYAHFPINASISGDAKGIEIRNF 401
           D+WFGSRK SA+IRTALSHV NLI GVTKGYRYKMRFVYAHFPINASI+   K IEIRNF
Sbjct: 61  DAWFGSRKTSAAIRTALSHVENLITGVTKGYRYKMRFVYAHFPINASITNSNKSIEIRNF 120

Query: 402 LGEKRVRKVDMLDGVTILRSEKVKDELILDGNDIELVSRSAALINQKCHVKNKDIRKFLD 581
           LGEK+VRKVDMLDGV+I+RSEKVKDEL+LDGNDIELVSRSAALINQKCHVKNKDIRKFLD
Sbjct: 121 LGEKKVRKVDMLDGVSIVRSEKVKDELVLDGNDIELVSRSAALINQKCHVKNKDIRKFLD 180

Query: 582 GIYVSEKGTVATEE 623
           GIYVSEKGTV  EE
Sbjct: 181 GIYVSEKGTVVEEE 194


>ref|XP_002518960.1| 60S ribosomal protein L9, putative [Ricinus communis]
           gi|223541947|gb|EEF43493.1| 60S ribosomal protein L9,
           putative [Ricinus communis]
          Length = 194

 Score =  336 bits (862), Expect = 4e-90
 Identities = 166/194 (85%), Positives = 182/194 (93%)
 Frame = +3

Query: 42  MKTILSSETMDIPDGVKIKVNAKMITVEGPKGKLVRNFKHLNLDFQLIKNKENGKRQLKV 221
           MKTILSSETMDIPDGVKIKVNAK+I VEGP+GKL RNFKHLNLDFQLIK++E GKR+LK+
Sbjct: 1   MKTILSSETMDIPDGVKIKVNAKIIEVEGPRGKLTRNFKHLNLDFQLIKDEETGKRKLKI 60

Query: 222 DSWFGSRKASASIRTALSHVGNLINGVTKGYRYKMRFVYAHFPINASISGDAKGIEIRNF 401
           ++WFGSRK SA+IRTALSHV NLI GVTKGYRYKMRFVYAHFPINASI+     IEIRNF
Sbjct: 61  EAWFGSRKTSAAIRTALSHVENLITGVTKGYRYKMRFVYAHFPINASITNSNSAIEIRNF 120

Query: 402 LGEKRVRKVDMLDGVTILRSEKVKDELILDGNDIELVSRSAALINQKCHVKNKDIRKFLD 581
           LGEK+VRKVDML+GVT++RSEKVKDEL+LDGNDIELVSRSAALINQKCHVKNKDIRKFLD
Sbjct: 121 LGEKKVRKVDMLEGVTVVRSEKVKDELVLDGNDIELVSRSAALINQKCHVKNKDIRKFLD 180

Query: 582 GIYVSEKGTVATEE 623
           GIYVSEKGTVA +E
Sbjct: 181 GIYVSEKGTVAEQE 194


>ref|XP_004145906.1| PREDICTED: 60S ribosomal protein L9-like [Cucumis sativus]
           gi|449497261|ref|XP_004160355.1| PREDICTED: 60S
           ribosomal protein L9-like [Cucumis sativus]
          Length = 194

 Score =  335 bits (860), Expect = 7e-90
 Identities = 167/194 (86%), Positives = 181/194 (93%)
 Frame = +3

Query: 42  MKTILSSETMDIPDGVKIKVNAKMITVEGPKGKLVRNFKHLNLDFQLIKNKENGKRQLKV 221
           MKTILSSETMDIPDGVKIKVNAK+I VEGP+GKLVRNFKHLNLDFQLI ++  GK++LK+
Sbjct: 1   MKTILSSETMDIPDGVKIKVNAKIIEVEGPRGKLVRNFKHLNLDFQLITDEATGKKKLKI 60

Query: 222 DSWFGSRKASASIRTALSHVGNLINGVTKGYRYKMRFVYAHFPINASISGDAKGIEIRNF 401
           D+WFGSRK SA+IRTALSHV NLI GVTKGYRYKMRFVYAHFPINASI+   K IEIRNF
Sbjct: 61  DAWFGSRKTSAAIRTALSHVENLITGVTKGYRYKMRFVYAHFPINASITNTNKSIEIRNF 120

Query: 402 LGEKRVRKVDMLDGVTILRSEKVKDELILDGNDIELVSRSAALINQKCHVKNKDIRKFLD 581
           LGEK+VRKVDMLDGV+I+RSEKVKDEL+LDGNDIELVSRSAALINQKCHVKNKDIRKFLD
Sbjct: 121 LGEKKVRKVDMLDGVSIIRSEKVKDELVLDGNDIELVSRSAALINQKCHVKNKDIRKFLD 180

Query: 582 GIYVSEKGTVATEE 623
           GIYVSEKGTV  EE
Sbjct: 181 GIYVSEKGTVVEEE 194


>gb|ABB29957.1| unknown [Solanum tuberosum]
          Length = 194

 Score =  335 bits (860), Expect = 7e-90
 Identities = 166/194 (85%), Positives = 181/194 (93%)
 Frame = +3

Query: 42  MKTILSSETMDIPDGVKIKVNAKMITVEGPKGKLVRNFKHLNLDFQLIKNKENGKRQLKV 221
           MKTILSSETMDIPDG+ IKV AK I VEGP+GKLVRNFKHLNLDFQLIK++E G+++LKV
Sbjct: 1   MKTILSSETMDIPDGISIKVKAKQIEVEGPRGKLVRNFKHLNLDFQLIKDEETGQKKLKV 60

Query: 222 DSWFGSRKASASIRTALSHVGNLINGVTKGYRYKMRFVYAHFPINASISGDAKGIEIRNF 401
           D+WFGSRKA+ASIRTALSHV NLI GVTKGYRYKMRFVYAHFPINASI+G  K IEIRNF
Sbjct: 61  DAWFGSRKATASIRTALSHVNNLIVGVTKGYRYKMRFVYAHFPINASITGGNKAIEIRNF 120

Query: 402 LGEKRVRKVDMLDGVTILRSEKVKDELILDGNDIELVSRSAALINQKCHVKNKDIRKFLD 581
           LGEK+VRKVDMLDGVT++RSEKVKDEL+LDGNDIELVSRSAALINQKCHVKNKDIRKFLD
Sbjct: 121 LGEKKVRKVDMLDGVTVVRSEKVKDELVLDGNDIELVSRSAALINQKCHVKNKDIRKFLD 180

Query: 582 GIYVSEKGTVATEE 623
           GIYVSEKG +  EE
Sbjct: 181 GIYVSEKGKIVEEE 194


>ref|XP_002276785.1| PREDICTED: 60S ribosomal protein L9 [Vitis vinifera]
          Length = 193

 Score =  334 bits (856), Expect = 2e-89
 Identities = 169/194 (87%), Positives = 182/194 (93%)
 Frame = +3

Query: 42  MKTILSSETMDIPDGVKIKVNAKMITVEGPKGKLVRNFKHLNLDFQLIKNKENGKRQLKV 221
           MKTILSSETMDIPD VKIKV AKMI VEGP+GKL RNFKHLNLDFQLIK+ E+GKR+LK+
Sbjct: 1   MKTILSSETMDIPDDVKIKVKAKMIEVEGPRGKLSRNFKHLNLDFQLIKD-ESGKRKLKI 59

Query: 222 DSWFGSRKASASIRTALSHVGNLINGVTKGYRYKMRFVYAHFPINASISGDAKGIEIRNF 401
           D+WFGSRK +A+IRTALSHV NLI GVTKGYRYKMRFVYAHFPINASI+   KGIEIRNF
Sbjct: 60  DAWFGSRKTTAAIRTALSHVENLITGVTKGYRYKMRFVYAHFPINASITNGNKGIEIRNF 119

Query: 402 LGEKRVRKVDMLDGVTILRSEKVKDELILDGNDIELVSRSAALINQKCHVKNKDIRKFLD 581
           LGEK+VRKVDMLDGV+ILRSEKVKDEL+LDGNDIELVSRSAALINQKCHVKNKDIRKFLD
Sbjct: 120 LGEKKVRKVDMLDGVSILRSEKVKDELVLDGNDIELVSRSAALINQKCHVKNKDIRKFLD 179

Query: 582 GIYVSEKGTVATEE 623
           GIYVSEKGT+A EE
Sbjct: 180 GIYVSEKGTIAEEE 193


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