BLASTX nr result

ID: Coptis21_contig00005725 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00005725
         (1472 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002285898.1| PREDICTED: prolyl 4-hydroxylase subunit alph...   405   e-110
ref|XP_002893096.1| oxidoreductase [Arabidopsis lyrata subsp. ly...   402   e-109
ref|NP_564109.1| 2-oxoglutarate (2OG) and Fe(II)-dependent oxyge...   401   e-109
gb|AAM61711.1| putative prolyl 4-hydroxylase, alpha subunit [Ara...   401   e-109
ref|XP_002263060.1| PREDICTED: prolyl 4-hydroxylase subunit alph...   400   e-109

>ref|XP_002285898.1| PREDICTED: prolyl 4-hydroxylase subunit alpha-2 [Vitis vinifera]
            gi|302141716|emb|CBI18919.3| unnamed protein product
            [Vitis vinifera]
          Length = 288

 Score =  405 bits (1040), Expect = e-110
 Identities = 193/251 (76%), Positives = 215/251 (85%)
 Frame = -3

Query: 1218 SIPMNNNDDDGAKAVVDLASFVHKNVQRGDGVGENRRDQWTEILSWEPRAFVYHNFLSKE 1039
            S+P+   D D A    DL+SF  K    G+G+G+ R +QWTEI+SWEPRAF+YHNFLSKE
Sbjct: 41   SLPIGTVDSDAAN---DLSSFRRKTFDGGEGLGK-RGEQWTEIVSWEPRAFIYHNFLSKE 96

Query: 1038 ECDYLINLAKPHMEKSTVVDSETGRSKDSRVRTSSGTFLQXXXXXXXXXXXXXIADFTFI 859
            EC+Y+I+LAKP+M+KSTVVDSETGRSKDSRVRTSSG FL+             IADFTFI
Sbjct: 97   ECEYMISLAKPYMKKSTVVDSETGRSKDSRVRTSSGMFLRRGRDKIIRDIEKRIADFTFI 156

Query: 858  PAEHGEGLQILHYEVGQKYEPHYDYFLDQFNTKNGGQRIATVLMYLSDVEEGGETVFPSA 679
            P EHGEGLQ+LHYEVGQKY+ HYDYFLD+FNTKNGGQRIAT+LMYLSDVEEGGETVFP+ 
Sbjct: 157  PVEHGEGLQVLHYEVGQKYDAHYDYFLDEFNTKNGGQRIATLLMYLSDVEEGGETVFPAT 216

Query: 678  KGNFSSVPWWNELSECGKKGLSVKPKMGDALLFWSMRPDATLDPSSLHGGCPVIQGNKWS 499
            K NFSSVPWWNELSECGKKGLSVKPKMGDALLFWSMRPDATLDPSSLHGGCPVI+GNKWS
Sbjct: 217  KANFSSVPWWNELSECGKKGLSVKPKMGDALLFWSMRPDATLDPSSLHGGCPVIKGNKWS 276

Query: 498  STKWLHVSEYK 466
            STKW+HV EYK
Sbjct: 277  STKWMHVEEYK 287


>ref|XP_002893096.1| oxidoreductase [Arabidopsis lyrata subsp. lyrata]
            gi|297338938|gb|EFH69355.1| oxidoreductase [Arabidopsis
            lyrata subsp. lyrata]
          Length = 287

 Score =  402 bits (1032), Expect = e-109
 Identities = 190/252 (75%), Positives = 219/252 (86%)
 Frame = -3

Query: 1218 SIPMNNNDDDGAKAVVDLASFVHKNVQRGDGVGENRRDQWTEILSWEPRAFVYHNFLSKE 1039
            S+P+NN++     + +DL+ F     +R +G+G+ R DQWTE+LSWEPRAFVYHNFLSKE
Sbjct: 41   SLPINNDES----SPIDLSYFRRAATERSEGLGK-RGDQWTEVLSWEPRAFVYHNFLSKE 95

Query: 1038 ECDYLINLAKPHMEKSTVVDSETGRSKDSRVRTSSGTFLQXXXXXXXXXXXXXIADFTFI 859
            EC+YLI+LAKPHM KSTVVDSETG+SKDSRVRTSSGTFL+             IAD+TFI
Sbjct: 96   ECEYLISLAKPHMVKSTVVDSETGKSKDSRVRTSSGTFLRRGRDKIIKTIEKRIADYTFI 155

Query: 858  PAEHGEGLQILHYEVGQKYEPHYDYFLDQFNTKNGGQRIATVLMYLSDVEEGGETVFPSA 679
            PA+HGEGLQILHYE GQKYEPHYDYF+D+FNTKNGGQR+AT+LMYLSDVEEGGETVFP+A
Sbjct: 156  PADHGEGLQILHYEAGQKYEPHYDYFVDEFNTKNGGQRMATMLMYLSDVEEGGETVFPAA 215

Query: 678  KGNFSSVPWWNELSECGKKGLSVKPKMGDALLFWSMRPDATLDPSSLHGGCPVIQGNKWS 499
              NFSSVPW+NELSECGKKGLSVKP+MGDALLFWSMRPDATLDP+SLHGGCPVI+GNKWS
Sbjct: 216  NMNFSSVPWYNELSECGKKGLSVKPRMGDALLFWSMRPDATLDPTSLHGGCPVIRGNKWS 275

Query: 498  STKWLHVSEYKV 463
            STKW+HV EYK+
Sbjct: 276  STKWMHVGEYKI 287


>ref|NP_564109.1| 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase-like protein
            [Arabidopsis thaliana]
            gi|9558598|gb|AAF88161.1|AC026234_12 Contains similarity
            to a prolyl 4-hydroxylase alpha subunit protein from
            Gallus gallus gi|212530 [Arabidopsis thaliana]
            gi|90962978|gb|ABE02413.1| At1g20270 [Arabidopsis
            thaliana] gi|332191835|gb|AEE29956.1| 2-oxoglutarate
            (2OG) and Fe(II)-dependent oxygenase-like protein
            [Arabidopsis thaliana]
          Length = 287

 Score =  401 bits (1031), Expect = e-109
 Identities = 189/252 (75%), Positives = 219/252 (86%)
 Frame = -3

Query: 1218 SIPMNNNDDDGAKAVVDLASFVHKNVQRGDGVGENRRDQWTEILSWEPRAFVYHNFLSKE 1039
            S+P+NN++     + +DL+ F     +R +G+G+ R DQWTE+LSWEPRAFVYHNFLSKE
Sbjct: 41   SLPINNDES----SPIDLSYFRRAATERSEGLGK-RGDQWTEVLSWEPRAFVYHNFLSKE 95

Query: 1038 ECDYLINLAKPHMEKSTVVDSETGRSKDSRVRTSSGTFLQXXXXXXXXXXXXXIADFTFI 859
            EC+YLI+LAKPHM KSTVVDSETG+SKDSRVRTSSGTFL+             IAD+TFI
Sbjct: 96   ECEYLISLAKPHMVKSTVVDSETGKSKDSRVRTSSGTFLRRGRDKIIKTIEKRIADYTFI 155

Query: 858  PAEHGEGLQILHYEVGQKYEPHYDYFLDQFNTKNGGQRIATVLMYLSDVEEGGETVFPSA 679
            PA+HGEGLQ+LHYE GQKYEPHYDYF+D+FNTKNGGQR+AT+LMYLSDVEEGGETVFP+A
Sbjct: 156  PADHGEGLQVLHYEAGQKYEPHYDYFVDEFNTKNGGQRMATMLMYLSDVEEGGETVFPAA 215

Query: 678  KGNFSSVPWWNELSECGKKGLSVKPKMGDALLFWSMRPDATLDPSSLHGGCPVIQGNKWS 499
              NFSSVPW+NELSECGKKGLSVKP+MGDALLFWSMRPDATLDP+SLHGGCPVI+GNKWS
Sbjct: 216  NMNFSSVPWYNELSECGKKGLSVKPRMGDALLFWSMRPDATLDPTSLHGGCPVIRGNKWS 275

Query: 498  STKWLHVSEYKV 463
            STKW+HV EYK+
Sbjct: 276  STKWMHVGEYKI 287


>gb|AAM61711.1| putative prolyl 4-hydroxylase, alpha subunit [Arabidopsis thaliana]
          Length = 287

 Score =  401 bits (1031), Expect = e-109
 Identities = 189/252 (75%), Positives = 219/252 (86%)
 Frame = -3

Query: 1218 SIPMNNNDDDGAKAVVDLASFVHKNVQRGDGVGENRRDQWTEILSWEPRAFVYHNFLSKE 1039
            S+P+NN++     + +DL+ F     +R +G+G+ R DQWTE+LSWEPRAFVYHNFLSKE
Sbjct: 41   SLPINNDES----SPIDLSYFRRAATERSEGLGK-RGDQWTEVLSWEPRAFVYHNFLSKE 95

Query: 1038 ECDYLINLAKPHMEKSTVVDSETGRSKDSRVRTSSGTFLQXXXXXXXXXXXXXIADFTFI 859
            EC+YLI+LAKPHM KSTVVDSETG+SKDSRVRTSSGTFL+             IAD+TFI
Sbjct: 96   ECEYLISLAKPHMVKSTVVDSETGKSKDSRVRTSSGTFLRRGRDKIIKTIEKRIADYTFI 155

Query: 858  PAEHGEGLQILHYEVGQKYEPHYDYFLDQFNTKNGGQRIATVLMYLSDVEEGGETVFPSA 679
            PA+HGEGLQ+LHYE GQKYEPHYDYF+D+FNTKNGGQR+AT+LMYLSDVEEGGETVFP+A
Sbjct: 156  PADHGEGLQVLHYEAGQKYEPHYDYFVDEFNTKNGGQRMATMLMYLSDVEEGGETVFPAA 215

Query: 678  KGNFSSVPWWNELSECGKKGLSVKPKMGDALLFWSMRPDATLDPSSLHGGCPVIQGNKWS 499
              NFSSVPW+NELSECGKKGLSVKP+MGDALLFWSMRPDATLDP+SLHGGCPVI+GNKWS
Sbjct: 216  NMNFSSVPWYNELSECGKKGLSVKPRMGDALLFWSMRPDATLDPTSLHGGCPVIRGNKWS 275

Query: 498  STKWLHVSEYKV 463
            STKW+HV EYK+
Sbjct: 276  STKWIHVGEYKI 287


>ref|XP_002263060.1| PREDICTED: prolyl 4-hydroxylase subunit alpha-1 [Vitis vinifera]
            gi|296084059|emb|CBI24447.3| unnamed protein product
            [Vitis vinifera]
          Length = 288

 Score =  400 bits (1028), Expect = e-109
 Identities = 186/252 (73%), Positives = 216/252 (85%)
 Frame = -3

Query: 1218 SIPMNNNDDDGAKAVVDLASFVHKNVQRGDGVGENRRDQWTEILSWEPRAFVYHNFLSKE 1039
            SIP ++ D   A    DL++ VH+ V+R DG  + + + W+E++SWEPRAFVYHNFLSK+
Sbjct: 41   SIPSHSGDSPRAN---DLSTIVHRTVERSDG-NDGKGEPWSEVISWEPRAFVYHNFLSKD 96

Query: 1038 ECDYLINLAKPHMEKSTVVDSETGRSKDSRVRTSSGTFLQXXXXXXXXXXXXXIADFTFI 859
            EC+YLI LAKPHM+KSTVVDS TG+SKDSRVRTSSGTFL              ++DFTF+
Sbjct: 97   ECEYLIKLAKPHMQKSTVVDSSTGKSKDSRVRTSSGTFLTRGQDKIIRGIEKRLSDFTFL 156

Query: 858  PAEHGEGLQILHYEVGQKYEPHYDYFLDQFNTKNGGQRIATVLMYLSDVEEGGETVFPSA 679
            P EHGEGLQILHYEVGQKYEPHYDYFLD +NTKNGGQR+ATVLMYLSDVEEGGETVFP+A
Sbjct: 157  PVEHGEGLQILHYEVGQKYEPHYDYFLDDYNTKNGGQRMATVLMYLSDVEEGGETVFPAA 216

Query: 678  KGNFSSVPWWNELSECGKKGLSVKPKMGDALLFWSMRPDATLDPSSLHGGCPVIQGNKWS 499
            KGNFSSVPWWNELS+CGK+GLSVKPKMGDALLFWSM+PDA+LDPSSLHGGCPVI+GNKWS
Sbjct: 217  KGNFSSVPWWNELSDCGKEGLSVKPKMGDALLFWSMKPDASLDPSSLHGGCPVIKGNKWS 276

Query: 498  STKWLHVSEYKV 463
            STKW+ V+EYK+
Sbjct: 277  STKWIRVNEYKI 288


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