BLASTX nr result

ID: Coptis21_contig00005720 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00005720
         (410 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAH56540.1| hypothetical protein [Ricinus communis]                58   9e-07
ref|XP_002276336.1| PREDICTED: uncharacterized protein LOC100262...    56   3e-06

>emb|CAH56540.1| hypothetical protein [Ricinus communis]
          Length = 180

 Score = 57.8 bits (138), Expect = 9e-07
 Identities = 30/41 (73%), Positives = 33/41 (80%)
 Frame = -2

Query: 127 SKRHNXXXXXSYNQILSFLEEDEEEPTQDLSSLITTLQQEI 5
           SKRH       YNQILS LEE+EEEPTQD+SSLITTLQQE+
Sbjct: 22  SKRHKS-----YNQILSLLEEEEEEPTQDISSLITTLQQEL 57


>ref|XP_002276336.1| PREDICTED: uncharacterized protein LOC100262017 [Vitis vinifera]
          Length = 169

 Score = 56.2 bits (134), Expect = 3e-06
 Identities = 30/42 (71%), Positives = 32/42 (76%)
 Frame = -2

Query: 127 SKRHNXXXXXSYNQILSFLEEDEEEPTQDLSSLITTLQQEIS 2
           SKRH       YN ILS L+ DEEEPTQDLSSLITTLQQE+S
Sbjct: 20  SKRHKS-----YNHILSILDADEEEPTQDLSSLITTLQQELS 56


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