BLASTX nr result

ID: Coptis21_contig00005708 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00005708
         (247 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ADE76872.1| unknown [Picea sitchensis]                              90   2e-16
ref|XP_002517154.1| conserved hypothetical protein [Ricinus comm...    88   8e-16
ref|XP_002311831.1| predicted protein [Populus trichocarpa] gi|2...    87   2e-15
ref|XP_002314410.1| predicted protein [Populus trichocarpa] gi|2...    86   2e-15
ref|XP_003546127.1| PREDICTED: TVP38/TMEM64 family membrane prot...    86   3e-15

>gb|ADE76872.1| unknown [Picea sitchensis]
          Length = 275

 Score = 90.1 bits (222), Expect = 2e-16
 Identities = 48/82 (58%), Positives = 51/82 (62%)
 Frame = +1

Query: 1   FLVWIDQNLGRWGPLVLAVAYIPLTVLAVPASALTXXXXXXXXXXXXXXADSIXXXXXXX 180
           FLVWID+NLG WGPLVLAVAYIPLTVLAVPAS LT              ADSI       
Sbjct: 37  FLVWIDKNLGHWGPLVLAVAYIPLTVLAVPASILTLGGGYLFGLTVGFIADSIGSTAGAT 96

Query: 181 XXXXXXXXIGRSFVISKLKDYP 246
                   IGRS+V+SKLKDYP
Sbjct: 97  AAFLVGKTIGRSYVVSKLKDYP 118


>ref|XP_002517154.1| conserved hypothetical protein [Ricinus communis]
           gi|223543789|gb|EEF45317.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 302

 Score = 87.8 bits (216), Expect = 8e-16
 Identities = 47/82 (57%), Positives = 51/82 (62%)
 Frame = +1

Query: 1   FLVWIDQNLGRWGPLVLAVAYIPLTVLAVPASALTXXXXXXXXXXXXXXADSIXXXXXXX 180
           FL+W++Q+LG WGPLVLAVAYIPLTVLAVPAS LT              ADSI       
Sbjct: 65  FLLWVEQDLGPWGPLVLAVAYIPLTVLAVPASVLTLGGGYLFGLPVGFVADSIGATVGAG 124

Query: 181 XXXXXXXXIGRSFVISKLKDYP 246
                   IGRSFVISKLKDYP
Sbjct: 125 AAFLLGRTIGRSFVISKLKDYP 146


>ref|XP_002311831.1| predicted protein [Populus trichocarpa] gi|222851651|gb|EEE89198.1|
           predicted protein [Populus trichocarpa]
          Length = 275

 Score = 86.7 bits (213), Expect = 2e-15
 Identities = 44/82 (53%), Positives = 51/82 (62%)
 Frame = +1

Query: 1   FLVWIDQNLGRWGPLVLAVAYIPLTVLAVPASALTXXXXXXXXXXXXXXADSIXXXXXXX 180
           FL+W++Q+LG WGPLVLA+AYIPLT+LAVPAS LT              ADSI       
Sbjct: 38  FLLWVEQDLGPWGPLVLAIAYIPLTILAVPASVLTLGGGYLFGLPVGFVADSIGATVGAG 97

Query: 181 XXXXXXXXIGRSFVISKLKDYP 246
                   IGRSFV+SKLKDYP
Sbjct: 98  AAFLLGRTIGRSFVVSKLKDYP 119


>ref|XP_002314410.1| predicted protein [Populus trichocarpa] gi|222863450|gb|EEF00581.1|
           predicted protein [Populus trichocarpa]
          Length = 275

 Score = 86.3 bits (212), Expect = 2e-15
 Identities = 45/82 (54%), Positives = 51/82 (62%)
 Frame = +1

Query: 1   FLVWIDQNLGRWGPLVLAVAYIPLTVLAVPASALTXXXXXXXXXXXXXXADSIXXXXXXX 180
           FL+W++Q+LG WGPLVLAVAYIPLTVLAVPA+ LT              ADSI       
Sbjct: 38  FLLWVEQDLGPWGPLVLAVAYIPLTVLAVPAAVLTLGGGYLFGLPLGFVADSIGATIGAG 97

Query: 181 XXXXXXXXIGRSFVISKLKDYP 246
                   IGRSFV+SKLKDYP
Sbjct: 98  AAFLLGRTIGRSFVVSKLKDYP 119


>ref|XP_003546127.1| PREDICTED: TVP38/TMEM64 family membrane protein slr0305-like
           [Glycine max]
          Length = 274

 Score = 85.9 bits (211), Expect = 3e-15
 Identities = 45/82 (54%), Positives = 50/82 (60%)
 Frame = +1

Query: 1   FLVWIDQNLGRWGPLVLAVAYIPLTVLAVPASALTXXXXXXXXXXXXXXADSIXXXXXXX 180
           FL+W+D +LG WGPLVLAVAYIPLTVLAVPAS LT              ADSI       
Sbjct: 37  FLLWVDHDLGPWGPLVLAVAYIPLTVLAVPASVLTLGGGYLFGLPVGFVADSIGATVGAG 96

Query: 181 XXXXXXXXIGRSFVISKLKDYP 246
                   IGRSFV+S+LKDYP
Sbjct: 97  AAFLLGRTIGRSFVVSRLKDYP 118


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