BLASTX nr result

ID: Coptis21_contig00005669 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00005669
         (1212 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002317584.1| predicted protein [Populus trichocarpa] gi|2...   393   e-107
ref|XP_002285529.1| PREDICTED: septum-promoting GTP-binding prot...   390   e-106
emb|CAN60928.1| hypothetical protein VITISV_008356 [Vitis vinife...   390   e-106
ref|XP_002319823.1| predicted protein [Populus trichocarpa] gi|2...   389   e-105
ref|XP_003617481.1| Ras-related protein Rab-37 [Medicago truncat...   370   e-100

>ref|XP_002317584.1| predicted protein [Populus trichocarpa] gi|222860649|gb|EEE98196.1|
            predicted protein [Populus trichocarpa]
          Length = 278

 Score =  393 bits (1010), Expect = e-107
 Identities = 197/274 (71%), Positives = 224/274 (81%), Gaps = 2/274 (0%)
 Frame = -3

Query: 1051 HTKMPQLGRKVIQF-NVKWMLHERVAFFRRFFRYLWDHLFMCSMRKPIGYRRLHRTISSC 875
            H KM QL R+V+   N+KW + ERV  F++FF+++WD +  CS+ KP+ YRRL     S 
Sbjct: 6    HEKMTQLCREVVHVKNIKWNILERVTVFKQFFQFIWDRILACSIGKPVRYRRLASRPYS- 64

Query: 874  PSPALVEAGLVNGEP-SCSGYETDSDLVALKISLLGDCQIGKTSFLVKYVGDEQEKRCLE 698
            P P  +EAG+ + E  SCSG+  DSDLV LKISLLGDCQIGKTSF++KYVGDEQEK+CL 
Sbjct: 65   PPPEAMEAGVESLEAASCSGFNPDSDLVRLKISLLGDCQIGKTSFMIKYVGDEQEKKCLG 124

Query: 697  MKGLNLVDKMFFVQGARIAYSIWDVGGDHGSLDHVPMACKDAVAILIMFDLTSRCTLNSV 518
            M GLNL+DK  FVQGARI++SIWDV GD  S+DHVP+ACKDAVAIL MFDLTSRCTLNSV
Sbjct: 125  MTGLNLMDKTLFVQGARISFSIWDVAGDSRSIDHVPIACKDAVAILFMFDLTSRCTLNSV 184

Query: 517  LGWYKQARTYNQTAIPILIGTKFDDFANLPLAVQWTIVSQARTYAKAMKATLFFSSATHN 338
            L WY QAR +NQTAIPILIGTKFDDF  LP  +QWTIV+QAR YAKAMKATLFFSSA HN
Sbjct: 185  LEWYSQARKWNQTAIPILIGTKFDDFVQLPPNLQWTIVTQARAYAKAMKATLFFSSAKHN 244

Query: 337  INVNKIFKFITAKLFNLPWTVERNLTIGEPIIDF 236
            INVNKIFKFI AKL NLPWTVERNLTIGEPIIDF
Sbjct: 245  INVNKIFKFIMAKLLNLPWTVERNLTIGEPIIDF 278


>ref|XP_002285529.1| PREDICTED: septum-promoting GTP-binding protein 1 [Vitis vinifera]
          Length = 282

 Score =  390 bits (1003), Expect = e-106
 Identities = 189/271 (69%), Positives = 226/271 (83%), Gaps = 1/271 (0%)
 Frame = -3

Query: 1045 KMPQLGRKVIQFNVKWMLHERVAFFRRFFRYLWDHLFMCSMRKPIGYRRL-HRTISSCPS 869
            KM QL RK+++ N++  + +RV  F++FFR++WD + +CS+ KPI Y RL  R+    PS
Sbjct: 12   KMTQLCRKIVRVNIRVRILDRVTIFQKFFRFIWDRIIVCSIGKPIRYHRLSRRSPPPSPS 71

Query: 868  PALVEAGLVNGEPSCSGYETDSDLVALKISLLGDCQIGKTSFLVKYVGDEQEKRCLEMKG 689
            P  +E+GL + +PS +  ++DSDLV+LKI ++GDCQIGKTSFL+KYVGDEQEK+CLEM G
Sbjct: 72   PETIESGLQSDDPSTAAGDSDSDLVSLKICVMGDCQIGKTSFLIKYVGDEQEKKCLEMTG 131

Query: 688  LNLVDKMFFVQGARIAYSIWDVGGDHGSLDHVPMACKDAVAILIMFDLTSRCTLNSVLGW 509
            LNL+DK   VQ ARIA+SIWDVGGDH SL HVP+ACKDAVAIL MFDLTSRCTLNSV+GW
Sbjct: 132  LNLMDKTLIVQDARIAFSIWDVGGDHTSLTHVPIACKDAVAILFMFDLTSRCTLNSVIGW 191

Query: 508  YKQARTYNQTAIPILIGTKFDDFANLPLAVQWTIVSQARTYAKAMKATLFFSSATHNINV 329
            Y QAR +NQTAIPI+IGTKFDDF  LP  +Q  IV+QAR YA+AMKATLFFSSATHNINV
Sbjct: 192  YSQARRWNQTAIPIMIGTKFDDFVKLPPDLQRPIVTQARGYARAMKATLFFSSATHNINV 251

Query: 328  NKIFKFITAKLFNLPWTVERNLTIGEPIIDF 236
            NKIFKFI AKLFNLPWTV+RNLTIGEPIIDF
Sbjct: 252  NKIFKFIMAKLFNLPWTVQRNLTIGEPIIDF 282


>emb|CAN60928.1| hypothetical protein VITISV_008356 [Vitis vinifera]
            gi|302142871|emb|CBI20166.3| unnamed protein product
            [Vitis vinifera]
          Length = 277

 Score =  390 bits (1003), Expect = e-106
 Identities = 189/271 (69%), Positives = 226/271 (83%), Gaps = 1/271 (0%)
 Frame = -3

Query: 1045 KMPQLGRKVIQFNVKWMLHERVAFFRRFFRYLWDHLFMCSMRKPIGYRRL-HRTISSCPS 869
            KM QL RK+++ N++  + +RV  F++FFR++WD + +CS+ KPI Y RL  R+    PS
Sbjct: 7    KMTQLCRKIVRVNIRVRILDRVTIFQKFFRFIWDRIIVCSIGKPIRYHRLSRRSPPPSPS 66

Query: 868  PALVEAGLVNGEPSCSGYETDSDLVALKISLLGDCQIGKTSFLVKYVGDEQEKRCLEMKG 689
            P  +E+GL + +PS +  ++DSDLV+LKI ++GDCQIGKTSFL+KYVGDEQEK+CLEM G
Sbjct: 67   PETIESGLQSDDPSTAAGDSDSDLVSLKICVMGDCQIGKTSFLIKYVGDEQEKKCLEMTG 126

Query: 688  LNLVDKMFFVQGARIAYSIWDVGGDHGSLDHVPMACKDAVAILIMFDLTSRCTLNSVLGW 509
            LNL+DK   VQ ARIA+SIWDVGGDH SL HVP+ACKDAVAIL MFDLTSRCTLNSV+GW
Sbjct: 127  LNLMDKTLIVQDARIAFSIWDVGGDHTSLTHVPIACKDAVAILFMFDLTSRCTLNSVIGW 186

Query: 508  YKQARTYNQTAIPILIGTKFDDFANLPLAVQWTIVSQARTYAKAMKATLFFSSATHNINV 329
            Y QAR +NQTAIPI+IGTKFDDF  LP  +Q  IV+QAR YA+AMKATLFFSSATHNINV
Sbjct: 187  YSQARRWNQTAIPIMIGTKFDDFVKLPPDLQRPIVTQARGYARAMKATLFFSSATHNINV 246

Query: 328  NKIFKFITAKLFNLPWTVERNLTIGEPIIDF 236
            NKIFKFI AKLFNLPWTV+RNLTIGEPIIDF
Sbjct: 247  NKIFKFIMAKLFNLPWTVQRNLTIGEPIIDF 277


>ref|XP_002319823.1| predicted protein [Populus trichocarpa] gi|222858199|gb|EEE95746.1|
            predicted protein [Populus trichocarpa]
          Length = 279

 Score =  389 bits (998), Expect = e-105
 Identities = 194/276 (70%), Positives = 222/276 (80%), Gaps = 4/276 (1%)
 Frame = -3

Query: 1051 HTKMPQLGRKVIQFN-VKWMLHERVAFFRRFFRYLWDHLFMCSMRKPIGYRRLHRTISSC 875
            H KM QL  K+   N +KW + ERV  F++FF ++WD +  CS+ KP  YRRL  T  SC
Sbjct: 6    HEKMTQLCVKIAHGNSIKWSILERVTVFKQFFHFIWDKILACSIGKPARYRRL--TYRSC 63

Query: 874  -PSPALVEAGLVNG--EPSCSGYETDSDLVALKISLLGDCQIGKTSFLVKYVGDEQEKRC 704
             P P  +EAG+       SC G+  DSDLV+LKISLLGDCQIGKTSF++KYVGDEQEK+C
Sbjct: 64   SPPPEAIEAGVETSLEAASCRGFSKDSDLVSLKISLLGDCQIGKTSFVIKYVGDEQEKKC 123

Query: 703  LEMKGLNLVDKMFFVQGARIAYSIWDVGGDHGSLDHVPMACKDAVAILIMFDLTSRCTLN 524
            LEM GL+L+DK  FVQGARI++SIWDV GD  SLDHVP+ACKDAVAIL MFDLTSRCTLN
Sbjct: 124  LEMTGLSLMDKTLFVQGARISFSIWDVAGDSSSLDHVPIACKDAVAILFMFDLTSRCTLN 183

Query: 523  SVLGWYKQARTYNQTAIPILIGTKFDDFANLPLAVQWTIVSQARTYAKAMKATLFFSSAT 344
            +V+ WY QAR +NQTAIPILIGTKFDDF  LP  +QWTIV+QAR YAKAMKATLFFSS+ 
Sbjct: 184  NVVEWYNQARKWNQTAIPILIGTKFDDFVQLPPNLQWTIVTQARAYAKAMKATLFFSSSK 243

Query: 343  HNINVNKIFKFITAKLFNLPWTVERNLTIGEPIIDF 236
            HNINVNKIFKFI AKLFNLPWTVERNLT+GEPIIDF
Sbjct: 244  HNINVNKIFKFIMAKLFNLPWTVERNLTVGEPIIDF 279


>ref|XP_003617481.1| Ras-related protein Rab-37 [Medicago truncatula]
            gi|355518816|gb|AET00440.1| Ras-related protein Rab-37
            [Medicago truncatula]
          Length = 289

 Score =  370 bits (950), Expect = e-100
 Identities = 187/279 (67%), Positives = 225/279 (80%), Gaps = 9/279 (3%)
 Frame = -3

Query: 1045 KMPQLGRKVIQFNVKWMLHERVAFFRRFFRYLWDHLFMCSM-RKPIGYRRL---HRTISS 878
            KM QL RK++Q +VK+ + +RV+F  +FFR++W+ L +CS+ R P  YRRL   H + SS
Sbjct: 11   KMTQLCRKIVQVDVKYGMLQRVSFVGQFFRFIWNKLMVCSVGRSPAQYRRLSLNHSSASS 70

Query: 877  C----PSPALVEAGLVNGEPSCS-GYETDSDLVALKISLLGDCQIGKTSFLVKYVGDEQE 713
                 PSPA V+ G    +   + GYE+DSDLV LKISLLGDC IGKT+FL+KYVG+E E
Sbjct: 71   SSSLSPSPATVDDGFTREQQHTNNGYESDSDLVNLKISLLGDCHIGKTTFLIKYVGNEVE 130

Query: 712  KRCLEMKGLNLVDKMFFVQGARIAYSIWDVGGDHGSLDHVPMACKDAVAILIMFDLTSRC 533
            KR L+M+GLNL+DK  +VQGARI++ IWDV GD  SLD +PMACKDAVA+LIMFDLTSR 
Sbjct: 131  KRSLQMEGLNLMDKTLYVQGARISFCIWDVAGDKKSLDQIPMACKDAVALLIMFDLTSRS 190

Query: 532  TLNSVLGWYKQARTYNQTAIPILIGTKFDDFANLPLAVQWTIVSQARTYAKAMKATLFFS 353
            TLN+V+GWY +AR +NQTAIPILIGTKFDDF  LP  +QWTIV+QAR YA+AMKATLFFS
Sbjct: 191  TLNNVVGWYSEARKWNQTAIPILIGTKFDDFVRLPPDLQWTIVTQARAYARAMKATLFFS 250

Query: 352  SATHNINVNKIFKFITAKLFNLPWTVERNLTIGEPIIDF 236
            SATHNINVNKIFKFI AKLFNLPWT+ERNL +GEPIIDF
Sbjct: 251  SATHNINVNKIFKFIMAKLFNLPWTIERNLKVGEPIIDF 289


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