BLASTX nr result

ID: Coptis21_contig00005646 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00005646
         (997 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AFX82676.1| multiprotein bridging factor 1 [Vitis pseudoretic...   244   2e-62
emb|CAA89698.1| orf [Ricinus communis]                                244   3e-62
ref|XP_002331813.1| predicted protein [Populus trichocarpa] gi|1...   243   4e-62
ref|XP_002280992.1| PREDICTED: multiprotein-bridging factor 1a [...   243   4e-62
gb|ACF06505.1| ethylene-responsive transcriptional coactivator [...   241   2e-61

>gb|AFX82676.1| multiprotein bridging factor 1 [Vitis pseudoreticulata]
          Length = 142

 Score =  244 bits (624), Expect = 2e-62
 Identities = 125/142 (88%), Positives = 134/142 (94%)
 Frame = +1

Query: 100 MAGVGPITQDWEPVVVRKKNPTTAARKDEKAVNAARRSGAEIETMKKATAGTNKAASSST 279
           MAGVGP+TQDWEPVV+RKK    AARKDEKAVNAARRSGAEIET++K+ AGTNKAASSST
Sbjct: 1   MAGVGPLTQDWEPVVIRKKPLNAAARKDEKAVNAARRSGAEIETLRKSHAGTNKAASSST 60

Query: 280 TLNTRKLDEETDVLAHDRVPTELKKCIMQARMDKKLTQAQLAQIINEKPQIIQEYESGKA 459
           +LNTRKLDEET+ LAHDRVPTELKK IMQARMDKKLTQ+QLAQ+INEKPQIIQEYESGKA
Sbjct: 61  SLNTRKLDEETENLAHDRVPTELKKSIMQARMDKKLTQSQLAQMINEKPQIIQEYESGKA 120

Query: 460 IPNQQIITKLERALGVKLRGKK 525
           IPNQQII KLERALGVKLRGKK
Sbjct: 121 IPNQQIIVKLERALGVKLRGKK 142


>emb|CAA89698.1| orf [Ricinus communis]
          Length = 142

 Score =  244 bits (622), Expect = 3e-62
 Identities = 123/142 (86%), Positives = 133/142 (93%)
 Frame = +1

Query: 100 MAGVGPITQDWEPVVVRKKNPTTAARKDEKAVNAARRSGAEIETMKKATAGTNKAASSST 279
           MAGVGPI+QDWEPVV+RKK PT AA+KDEK VNAARR+GAEIET+KK+ AGTNKAASSST
Sbjct: 1   MAGVGPISQDWEPVVIRKKAPTAAAKKDEKVVNAARRAGAEIETLKKSNAGTNKAASSST 60

Query: 280 TLNTRKLDEETDVLAHDRVPTELKKCIMQARMDKKLTQAQLAQIINEKPQIIQEYESGKA 459
           +LNTRKLDEET+ L HDRVPTELKK IMQARM+KK TQAQLAQ+INEKPQIIQEYESGKA
Sbjct: 61  SLNTRKLDEETENLTHDRVPTELKKAIMQARMEKKFTQAQLAQMINEKPQIIQEYESGKA 120

Query: 460 IPNQQIITKLERALGVKLRGKK 525
           IPNQQII KLERALGVKLRGKK
Sbjct: 121 IPNQQIIGKLERALGVKLRGKK 142


>ref|XP_002331813.1| predicted protein [Populus trichocarpa] gi|118488787|gb|ABK96204.1|
           unknown [Populus trichocarpa]
           gi|222874509|gb|EEF11640.1| predicted protein [Populus
           trichocarpa]
          Length = 142

 Score =  243 bits (621), Expect = 4e-62
 Identities = 124/142 (87%), Positives = 133/142 (93%)
 Frame = +1

Query: 100 MAGVGPITQDWEPVVVRKKNPTTAARKDEKAVNAARRSGAEIETMKKATAGTNKAASSST 279
           M+G GPI+QDWEPVV+RKK P  AA+KDEKAVNAARRSGAEIET+KK+TAGTNKAASSST
Sbjct: 1   MSGGGPISQDWEPVVIRKKAPNAAAKKDEKAVNAARRSGAEIETIKKSTAGTNKAASSST 60

Query: 280 TLNTRKLDEETDVLAHDRVPTELKKCIMQARMDKKLTQAQLAQIINEKPQIIQEYESGKA 459
           +LNTRKLDEET+ LAHDRVPTELKK IMQ R DKKLTQAQLAQ+INEKPQIIQEYESGKA
Sbjct: 61  SLNTRKLDEETENLAHDRVPTELKKAIMQGRTDKKLTQAQLAQLINEKPQIIQEYESGKA 120

Query: 460 IPNQQIITKLERALGVKLRGKK 525
           IPNQQII KLERALGVKLRGKK
Sbjct: 121 IPNQQIIGKLERALGVKLRGKK 142


>ref|XP_002280992.1| PREDICTED: multiprotein-bridging factor 1a [Vitis vinifera]
           gi|147865629|emb|CAN83249.1| hypothetical protein
           VITISV_019642 [Vitis vinifera]
           gi|302143433|emb|CBI21994.3| unnamed protein product
           [Vitis vinifera]
          Length = 142

 Score =  243 bits (621), Expect = 4e-62
 Identities = 124/142 (87%), Positives = 134/142 (94%)
 Frame = +1

Query: 100 MAGVGPITQDWEPVVVRKKNPTTAARKDEKAVNAARRSGAEIETMKKATAGTNKAASSST 279
           MAGVGP+TQDWEPVV+RKK    AA+KDEKAVNAARRSGAEIET++K+ AGTNKAASSST
Sbjct: 1   MAGVGPLTQDWEPVVIRKKPLNAAAKKDEKAVNAARRSGAEIETLRKSHAGTNKAASSST 60

Query: 280 TLNTRKLDEETDVLAHDRVPTELKKCIMQARMDKKLTQAQLAQIINEKPQIIQEYESGKA 459
           +LNTRKLDEET+ LAHDRVPTELKK IMQARMDKKLTQ+QLAQ+INEKPQIIQEYESGKA
Sbjct: 61  SLNTRKLDEETENLAHDRVPTELKKSIMQARMDKKLTQSQLAQMINEKPQIIQEYESGKA 120

Query: 460 IPNQQIITKLERALGVKLRGKK 525
           IPNQQII KLERALGVKLRGKK
Sbjct: 121 IPNQQIIVKLERALGVKLRGKK 142


>gb|ACF06505.1| ethylene-responsive transcriptional coactivator [Elaeis guineensis]
          Length = 142

 Score =  241 bits (615), Expect = 2e-61
 Identities = 121/142 (85%), Positives = 133/142 (93%)
 Frame = +1

Query: 100 MAGVGPITQDWEPVVVRKKNPTTAARKDEKAVNAARRSGAEIETMKKATAGTNKAASSST 279
           MAG+GPITQDWEPVVVRKK P  AA+KDEKAVNAARRSGAEI+T+KK+ AGTNKAASSST
Sbjct: 1   MAGIGPITQDWEPVVVRKKAPNAAAKKDEKAVNAARRSGAEIDTVKKSNAGTNKAASSST 60

Query: 280 TLNTRKLDEETDVLAHDRVPTELKKCIMQARMDKKLTQAQLAQIINEKPQIIQEYESGKA 459
           TLNTRKLDE+T+ L+H+RVP ELKK IMQARM K+LTQAQLAQ+INEKPQ+IQEYESGKA
Sbjct: 61  TLNTRKLDEDTESLSHERVPMELKKNIMQARMGKRLTQAQLAQLINEKPQVIQEYESGKA 120

Query: 460 IPNQQIITKLERALGVKLRGKK 525
           IPNQQIITKLER LGVKLRGKK
Sbjct: 121 IPNQQIITKLERVLGVKLRGKK 142


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