BLASTX nr result

ID: Coptis21_contig00005597 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00005597
         (773 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002267856.2| PREDICTED: paired amphipathic helix protein ...   133   4e-29
emb|CBI32068.3| unnamed protein product [Vitis vinifera]              133   4e-29
ref|XP_003551998.1| PREDICTED: paired amphipathic helix protein ...   129   7e-28
ref|XP_003519283.1| PREDICTED: paired amphipathic helix protein ...   129   7e-28
ref|XP_003517876.1| PREDICTED: paired amphipathic helix protein ...   129   7e-28

>ref|XP_002267856.2| PREDICTED: paired amphipathic helix protein Sin3-like 4-like [Vitis
           vinifera]
          Length = 1421

 Score =  133 bits (335), Expect = 4e-29
 Identities = 65/92 (70%), Positives = 79/92 (85%), Gaps = 2/92 (2%)
 Frame = -1

Query: 515 SGQPR--GGGQRKLTTNDALRYLKDVKDTLHNKRHEYDEFLDVMKDFKSQRINTADVIAK 342
           SGQP+  GGG +KLTTNDAL YLK VKD   +KR +YD+FL+VMKDFK+QRI+TA VIA+
Sbjct: 27  SGQPQMMGGGTQKLTTNDALAYLKAVKDIFQDKRDKYDDFLEVMKDFKAQRIDTAGVIAR 86

Query: 341 IKVLFRGHQNLILGFNTFLPNGYEITLPLEGD 246
           +K LF+GH++LILGFNTFLP GYEITLPLE +
Sbjct: 87  VKELFKGHRDLILGFNTFLPKGYEITLPLEDE 118


>emb|CBI32068.3| unnamed protein product [Vitis vinifera]
          Length = 1445

 Score =  133 bits (335), Expect = 4e-29
 Identities = 65/92 (70%), Positives = 79/92 (85%), Gaps = 2/92 (2%)
 Frame = -1

Query: 515 SGQPR--GGGQRKLTTNDALRYLKDVKDTLHNKRHEYDEFLDVMKDFKSQRINTADVIAK 342
           SGQP+  GGG +KLTTNDAL YLK VKD   +KR +YD+FL+VMKDFK+QRI+TA VIA+
Sbjct: 27  SGQPQMMGGGTQKLTTNDALAYLKAVKDIFQDKRDKYDDFLEVMKDFKAQRIDTAGVIAR 86

Query: 341 IKVLFRGHQNLILGFNTFLPNGYEITLPLEGD 246
           +K LF+GH++LILGFNTFLP GYEITLPLE +
Sbjct: 87  VKELFKGHRDLILGFNTFLPKGYEITLPLEDE 118


>ref|XP_003551998.1| PREDICTED: paired amphipathic helix protein Sin3-like 4-like
           [Glycine max]
          Length = 1367

 Score =  129 bits (324), Expect = 7e-28
 Identities = 62/94 (65%), Positives = 79/94 (84%), Gaps = 2/94 (2%)
 Frame = -1

Query: 521 DKSGQPR--GGGQRKLTTNDALRYLKDVKDTLHNKRHEYDEFLDVMKDFKSQRINTADVI 348
           + SGQP+   GG +KLTTNDAL YL+ VKD   +KR +YD+FL+VMKDFK+QRI+T+ VI
Sbjct: 24  EPSGQPQMTSGGGQKLTTNDALAYLRAVKDIFQDKREKYDDFLEVMKDFKAQRIDTSGVI 83

Query: 347 AKIKVLFRGHQNLILGFNTFLPNGYEITLPLEGD 246
           A++K LF+GH++LILGFNTFLP GYEITLPLE +
Sbjct: 84  ARVKELFKGHKDLILGFNTFLPKGYEITLPLEDE 117


>ref|XP_003519283.1| PREDICTED: paired amphipathic helix protein Sin3-like 4-like
           [Glycine max]
          Length = 1407

 Score =  129 bits (324), Expect = 7e-28
 Identities = 63/94 (67%), Positives = 78/94 (82%), Gaps = 2/94 (2%)
 Frame = -1

Query: 521 DKSGQPR--GGGQRKLTTNDALRYLKDVKDTLHNKRHEYDEFLDVMKDFKSQRINTADVI 348
           + SGQP+   GG +KLTTNDAL YLK VKD   +KR +YD+FL+VMKDFK+QRI+TA VI
Sbjct: 25  EASGQPQIMNGGAQKLTTNDALAYLKAVKDIFQDKRDKYDDFLEVMKDFKAQRIDTAGVI 84

Query: 347 AKIKVLFRGHQNLILGFNTFLPNGYEITLPLEGD 246
           A++K LF+GH++LILGFNTFLP GYEITLP E +
Sbjct: 85  ARVKELFKGHRDLILGFNTFLPKGYEITLPSEDE 118


>ref|XP_003517876.1| PREDICTED: paired amphipathic helix protein Sin3-like 4-like
           [Glycine max]
          Length = 1414

 Score =  129 bits (324), Expect = 7e-28
 Identities = 63/94 (67%), Positives = 77/94 (81%), Gaps = 2/94 (2%)
 Frame = -1

Query: 521 DKSGQPR--GGGQRKLTTNDALRYLKDVKDTLHNKRHEYDEFLDVMKDFKSQRINTADVI 348
           + SGQP+   GG +KLTTNDAL YLK VKD   +KR +YD+FL+VMKDFK+QRI+T  VI
Sbjct: 25  EASGQPQMMNGGAQKLTTNDALAYLKAVKDIFQDKRDKYDDFLEVMKDFKAQRIDTVGVI 84

Query: 347 AKIKVLFRGHQNLILGFNTFLPNGYEITLPLEGD 246
           A++K LF+GH++LILGFNTFLP GYEITLP E D
Sbjct: 85  ARVKELFKGHRDLILGFNTFLPKGYEITLPSEDD 118


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