BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00005582
         (880 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI32365.3| unnamed protein product [Vitis vinifera]              127   5e-34
gb|AFK42989.1| unknown [Lotus japonicus]                              127   5e-34
ref|XP_002275736.1| PREDICTED: small nuclear ribonucleoprotein S...   127   5e-34
ref|XP_002277211.1| PREDICTED: small nuclear ribonucleoprotein S...   127   5e-34
ref|XP_002520764.1| small nuclear ribonucleoprotein sm d1, putat...   127   5e-34

>emb|CBI32365.3| unnamed protein product [Vitis vinifera]
          Length = 144

 Score =  127 bits (320), Expect(2) = 5e-34
 Identities = 62/63 (98%), Positives = 63/63 (100%)
 Frame = -2

Query: 609 VDISMNTHLKTVKLTLKGKNPVTLDHLSVRGNNIRYYILPDSINLETLLVEETPRVKPKK 430
           VDISMNTHLKTVKLTLKGKNPVTLDHLSVRGNNIRYYILPDS+NLETLLVEETPRVKPKK
Sbjct: 62  VDISMNTHLKTVKLTLKGKNPVTLDHLSVRGNNIRYYILPDSLNLETLLVEETPRVKPKK 121

Query: 429 PTA 421
           PTA
Sbjct: 122 PTA 124



 Score = 43.5 bits (101), Expect(2) = 5e-34
 Identities = 21/21 (100%), Positives = 21/21 (100%)
 Frame = -3

Query: 785 MKLVRFLMKLNNETVSIELKN 723
           MKLVRFLMKLNNETVSIELKN
Sbjct: 31  MKLVRFLMKLNNETVSIELKN 51


>gb|AFK42989.1| unknown [Lotus japonicus]
          Length = 116

 Score =  127 bits (320), Expect(2) = 5e-34
 Identities = 62/63 (98%), Positives = 63/63 (100%)
 Frame = -2

Query: 609 VDISMNTHLKTVKLTLKGKNPVTLDHLSVRGNNIRYYILPDSINLETLLVEETPRVKPKK 430
           VDISMNTHLKTVKLTLKGKNPVTLDHLSVRGNNIRYYILPDS+NLETLLVEETPRVKPKK
Sbjct: 32  VDISMNTHLKTVKLTLKGKNPVTLDHLSVRGNNIRYYILPDSLNLETLLVEETPRVKPKK 91

Query: 429 PTA 421
           PTA
Sbjct: 92  PTA 94



 Score = 43.5 bits (101), Expect(2) = 5e-34
 Identities = 21/21 (100%), Positives = 21/21 (100%)
 Frame = -3

Query: 785 MKLVRFLMKLNNETVSIELKN 723
           MKLVRFLMKLNNETVSIELKN
Sbjct: 1   MKLVRFLMKLNNETVSIELKN 21


>ref|XP_002275736.1| PREDICTED: small nuclear ribonucleoprotein Sm D1-like [Vitis
           vinifera]
          Length = 114

 Score =  127 bits (320), Expect(2) = 5e-34
 Identities = 62/63 (98%), Positives = 63/63 (100%)
 Frame = -2

Query: 609 VDISMNTHLKTVKLTLKGKNPVTLDHLSVRGNNIRYYILPDSINLETLLVEETPRVKPKK 430
           VDISMNTHLKTVKLTLKGKNPVT+DHLSVRGNNIRYYILPDSINLETLLVEETPRVKPKK
Sbjct: 32  VDISMNTHLKTVKLTLKGKNPVTMDHLSVRGNNIRYYILPDSINLETLLVEETPRVKPKK 91

Query: 429 PTA 421
           PTA
Sbjct: 92  PTA 94



 Score = 43.5 bits (101), Expect(2) = 5e-34
 Identities = 21/21 (100%), Positives = 21/21 (100%)
 Frame = -3

Query: 785 MKLVRFLMKLNNETVSIELKN 723
           MKLVRFLMKLNNETVSIELKN
Sbjct: 1   MKLVRFLMKLNNETVSIELKN 21


>ref|XP_002277211.1| PREDICTED: small nuclear ribonucleoprotein Sm D1-like isoform 1
           [Vitis vinifera] gi|225436988|ref|XP_002277231.1|
           PREDICTED: small nuclear ribonucleoprotein Sm D1-like
           isoform 2 [Vitis vinifera]
          Length = 114

 Score =  127 bits (320), Expect(2) = 5e-34
 Identities = 62/63 (98%), Positives = 63/63 (100%)
 Frame = -2

Query: 609 VDISMNTHLKTVKLTLKGKNPVTLDHLSVRGNNIRYYILPDSINLETLLVEETPRVKPKK 430
           VDISMNTHLKTVKLTLKGKNPVTLDHLSVRGNNIRYYILPDS+NLETLLVEETPRVKPKK
Sbjct: 32  VDISMNTHLKTVKLTLKGKNPVTLDHLSVRGNNIRYYILPDSLNLETLLVEETPRVKPKK 91

Query: 429 PTA 421
           PTA
Sbjct: 92  PTA 94



 Score = 43.5 bits (101), Expect(2) = 5e-34
 Identities = 21/21 (100%), Positives = 21/21 (100%)
 Frame = -3

Query: 785 MKLVRFLMKLNNETVSIELKN 723
           MKLVRFLMKLNNETVSIELKN
Sbjct: 1   MKLVRFLMKLNNETVSIELKN 21


>ref|XP_002520764.1| small nuclear ribonucleoprotein sm d1, putative [Ricinus communis]
           gi|223540149|gb|EEF41726.1| small nuclear
           ribonucleoprotein sm d1, putative [Ricinus communis]
          Length = 114

 Score =  127 bits (320), Expect(2) = 5e-34
 Identities = 62/63 (98%), Positives = 63/63 (100%)
 Frame = -2

Query: 609 VDISMNTHLKTVKLTLKGKNPVTLDHLSVRGNNIRYYILPDSINLETLLVEETPRVKPKK 430
           VDISMNTHLKTVKLTLKGKNPVTLDHLSVRGNNIRYYILPDS+NLETLLVEETPRVKPKK
Sbjct: 32  VDISMNTHLKTVKLTLKGKNPVTLDHLSVRGNNIRYYILPDSLNLETLLVEETPRVKPKK 91

Query: 429 PTA 421
           PTA
Sbjct: 92  PTA 94



 Score = 43.5 bits (101), Expect(2) = 5e-34
 Identities = 21/21 (100%), Positives = 21/21 (100%)
 Frame = -3

Query: 785 MKLVRFLMKLNNETVSIELKN 723
           MKLVRFLMKLNNETVSIELKN
Sbjct: 1   MKLVRFLMKLNNETVSIELKN 21