BLASTX nr result

ID: Coptis21_contig00005576 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00005576
         (1035 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AEZ56249.1| manganese superoxide dismutase [Prunus persica] g...   392   e-107
gb|AFH08815.1| chloroplast Mn-superoxide dismutase 1C-a [Prunus ...   391   e-106
gb|AFH08811.1| chloroplast Mn-superoxide dismutase 1A-c [Prunus ...   390   e-106
sp|P11796.1|SODM_NICPL RecName: Full=Superoxide dismutase [Mn], ...   388   e-105
ref|XP_002280527.1| PREDICTED: superoxide dismutase [Mn], mitoch...   387   e-105

>gb|AEZ56249.1| manganese superoxide dismutase [Prunus persica]
           gi|383386091|gb|AFH08809.1| chloroplast Mn-superoxide
           dismutase 1A-a [Prunus persica]
           gi|383386093|gb|AFH08810.1| chloroplast Mn-superoxide
           dismutase 1A-b [Prunus persica]
           gi|383386097|gb|AFH08812.1| chloroplast Mn-superoxide
           dismutase 1A-d [Prunus persica]
           gi|383386099|gb|AFH08813.1| chloroplast Mn-superoxide
           dismutase 1B-a [Prunus persica]
           gi|383386101|gb|AFH08814.1| chloroplast Mn-superoxide
           dismutase 1B-b [Prunus persica]
           gi|383386105|gb|AFH08816.1| chloroplast Mn-superoxide
           dismutase 1B-c [Prunus persica]
           gi|383386107|gb|AFH08817.1| chloroplast Mn-superoxide
           dismutase 1B-d [Prunus persica]
          Length = 237

 Score =  392 bits (1007), Expect = e-107
 Identities = 188/236 (79%), Positives = 206/236 (87%), Gaps = 4/236 (1%)
 Frame = +2

Query: 68  MALRTIIVNRKLGLGFKRNL----VGFNNHTRRELQTCSLPDLGYDYGDLEPAISGEIMK 235
           MALR+++  + LGLGF+       VG   H+R   QT SLPDL YDYG LEPAISGEIM+
Sbjct: 1   MALRSLVARKSLGLGFQSKAKILAVGSTAHSRG-FQTFSLPDLPYDYGALEPAISGEIMQ 59

Query: 236 IHHTKHHQTYVANYNKALEQLDDAVTKGDASTVVKLQSAIKFNGGGHVNHSIFWKNLSPV 415
           +HH KHHQTYV NYNKALEQL DA+ KGDA+ VVKLQSAIKFNGGGHVNHSIFWKNL+PV
Sbjct: 60  LHHQKHHQTYVTNYNKALEQLHDAIAKGDAAAVVKLQSAIKFNGGGHVNHSIFWKNLTPV 119

Query: 416 SEGGGEPPHGSLGWAIDTNFGSFETLVQKMNSEGAALQGSGWVWLGLDKDAKKLVVETTA 595
            +GGGEPPHGSLGWAIDTNFGS E LVQK+N+EGAALQGSGWVWL LDK+ KKLVVETTA
Sbjct: 120 GQGGGEPPHGSLGWAIDTNFGSMEALVQKINAEGAALQGSGWVWLALDKELKKLVVETTA 179

Query: 596 NQDPLVTKGASLVPLLGIDVWEHAYYLQYKNVRPDYLKNIWKVINWKYSNEVYEKE 763
           NQDPLVTKG +LVPLLGIDVWEHAYYLQYKNVRPDYLKNIWKVINWKY++EVYEKE
Sbjct: 180 NQDPLVTKGPTLVPLLGIDVWEHAYYLQYKNVRPDYLKNIWKVINWKYASEVYEKE 235


>gb|AFH08815.1| chloroplast Mn-superoxide dismutase 1C-a [Prunus persica]
          Length = 237

 Score =  391 bits (1004), Expect = e-106
 Identities = 187/236 (79%), Positives = 206/236 (87%), Gaps = 4/236 (1%)
 Frame = +2

Query: 68  MALRTIIVNRKLGLGFKRNL----VGFNNHTRRELQTCSLPDLGYDYGDLEPAISGEIMK 235
           MALR+++  + LGLGF+       VG   H+R   QT SLPDL YDYG LEPAISGEIM+
Sbjct: 1   MALRSLVARKSLGLGFQSKAKILAVGSTAHSRG-FQTFSLPDLPYDYGALEPAISGEIMQ 59

Query: 236 IHHTKHHQTYVANYNKALEQLDDAVTKGDASTVVKLQSAIKFNGGGHVNHSIFWKNLSPV 415
           +HH KHHQTYV NYNKALEQL DA+ KGDA+ VVKLQSAIKFNGGGHVNHSIFW+NL+PV
Sbjct: 60  LHHQKHHQTYVTNYNKALEQLHDAIAKGDAAAVVKLQSAIKFNGGGHVNHSIFWRNLTPV 119

Query: 416 SEGGGEPPHGSLGWAIDTNFGSFETLVQKMNSEGAALQGSGWVWLGLDKDAKKLVVETTA 595
            +GGGEPPHGSLGWAIDTNFGS E LVQK+N+EGAALQGSGWVWL LDK+ KKLVVETTA
Sbjct: 120 GQGGGEPPHGSLGWAIDTNFGSMEALVQKINAEGAALQGSGWVWLALDKELKKLVVETTA 179

Query: 596 NQDPLVTKGASLVPLLGIDVWEHAYYLQYKNVRPDYLKNIWKVINWKYSNEVYEKE 763
           NQDPLVTKG +LVPLLGIDVWEHAYYLQYKNVRPDYLKNIWKVINWKY++EVYEKE
Sbjct: 180 NQDPLVTKGPTLVPLLGIDVWEHAYYLQYKNVRPDYLKNIWKVINWKYASEVYEKE 235


>gb|AFH08811.1| chloroplast Mn-superoxide dismutase 1A-c [Prunus persica]
           gi|383386109|gb|AFH08818.1| chloroplast Mn-superoxide
           dismutase 1B-e [Prunus persica]
          Length = 237

 Score =  390 bits (1003), Expect = e-106
 Identities = 187/236 (79%), Positives = 206/236 (87%), Gaps = 4/236 (1%)
 Frame = +2

Query: 68  MALRTIIVNRKLGLGFKRNL----VGFNNHTRRELQTCSLPDLGYDYGDLEPAISGEIMK 235
           MALR+++  + LGLGF+       VG   H+R   QT SLPDL YDYG LEPAISGEIM+
Sbjct: 1   MALRSLVARKSLGLGFQSKAKILAVGSTAHSRG-FQTFSLPDLPYDYGALEPAISGEIMQ 59

Query: 236 IHHTKHHQTYVANYNKALEQLDDAVTKGDASTVVKLQSAIKFNGGGHVNHSIFWKNLSPV 415
           +HH KHHQTYV NYNKALEQL DA+ KGDA+ VVKLQSAIKFNGGGHVNHSIFWKNL+PV
Sbjct: 60  LHHQKHHQTYVTNYNKALEQLHDAIAKGDAAAVVKLQSAIKFNGGGHVNHSIFWKNLTPV 119

Query: 416 SEGGGEPPHGSLGWAIDTNFGSFETLVQKMNSEGAALQGSGWVWLGLDKDAKKLVVETTA 595
            +GGGEPPHGSLGWAIDTNFGS E LVQK+N+EGAALQGSGWVWL LDK+ KKLVVETTA
Sbjct: 120 GQGGGEPPHGSLGWAIDTNFGSMEALVQKINAEGAALQGSGWVWLALDKELKKLVVETTA 179

Query: 596 NQDPLVTKGASLVPLLGIDVWEHAYYLQYKNVRPDYLKNIWKVINWKYSNEVYEKE 763
           NQDPLVTKG +LVPLLGIDVWEHAYYLQYKNVRPDYLKNIWKVINW+Y++EVYEKE
Sbjct: 180 NQDPLVTKGPTLVPLLGIDVWEHAYYLQYKNVRPDYLKNIWKVINWEYASEVYEKE 235


>sp|P11796.1|SODM_NICPL RecName: Full=Superoxide dismutase [Mn], mitochondrial; Flags:
           Precursor gi|19693|emb|CAA32643.1| unnamed protein
           product [Nicotiana plumbaginifolia]
          Length = 228

 Score =  388 bits (997), Expect = e-105
 Identities = 185/235 (78%), Positives = 205/235 (87%), Gaps = 2/235 (0%)
 Frame = +2

Query: 68  MALRTIIVNRKL--GLGFKRNLVGFNNHTRRELQTCSLPDLGYDYGDLEPAISGEIMKIH 241
           MALRT++  R L  GLGF++ L G        LQT SLPDL YDYG LEPAISG+IM++H
Sbjct: 1   MALRTLVSRRTLATGLGFRQQLRG--------LQTFSLPDLPYDYGALEPAISGDIMQLH 52

Query: 242 HTKHHQTYVANYNKALEQLDDAVTKGDASTVVKLQSAIKFNGGGHVNHSIFWKNLSPVSE 421
           H  HHQTYV NYNKALEQL DA++KGDA TV KL SAIKFNGGGH+NHSIFWKNL+PV E
Sbjct: 53  HQNHHQTYVTNYNKALEQLHDAISKGDAPTVAKLHSAIKFNGGGHINHSIFWKNLAPVRE 112

Query: 422 GGGEPPHGSLGWAIDTNFGSFETLVQKMNSEGAALQGSGWVWLGLDKDAKKLVVETTANQ 601
           GGGEPP GSLGWAIDTNFGS E LVQKMN+EGAALQGSGWVWLG+DK+ K+LV+ETTANQ
Sbjct: 113 GGGEPPKGSLGWAIDTNFGSLEALVQKMNAEGAALQGSGWVWLGVDKELKRLVIETTANQ 172

Query: 602 DPLVTKGASLVPLLGIDVWEHAYYLQYKNVRPDYLKNIWKVINWKYSNEVYEKEC 766
           DPLV+KGA+LVPLLGIDVWEHAYYLQYKNVRPDYLKNIWKV+NWKY+NEVYEKEC
Sbjct: 173 DPLVSKGANLVPLLGIDVWEHAYYLQYKNVRPDYLKNIWKVMNWKYANEVYEKEC 227


>ref|XP_002280527.1| PREDICTED: superoxide dismutase [Mn], mitochondrial [Vitis
           vinifera] gi|147839972|emb|CAN61687.1| hypothetical
           protein VITISV_024204 [Vitis vinifera]
          Length = 228

 Score =  387 bits (994), Expect = e-105
 Identities = 186/233 (79%), Positives = 204/233 (87%)
 Frame = +2

Query: 68  MALRTIIVNRKLGLGFKRNLVGFNNHTRRELQTCSLPDLGYDYGDLEPAISGEIMKIHHT 247
           MALRT+I  + LGLG     +G +   R  LQT SLPDL YDYG LEPAISGEIMK+HH 
Sbjct: 1   MALRTLITRKSLGLG-----LGVSQSVRG-LQTVSLPDLPYDYGALEPAISGEIMKLHHQ 54

Query: 248 KHHQTYVANYNKALEQLDDAVTKGDASTVVKLQSAIKFNGGGHVNHSIFWKNLSPVSEGG 427
           KHHQTY+ NYNKALEQL +A+ KGD+STVVKLQ AIKFNGGGHVNHSIFWKNL+PV EGG
Sbjct: 55  KHHQTYITNYNKALEQLHEAMEKGDSSTVVKLQGAIKFNGGGHVNHSIFWKNLTPVHEGG 114

Query: 428 GEPPHGSLGWAIDTNFGSFETLVQKMNSEGAALQGSGWVWLGLDKDAKKLVVETTANQDP 607
           GEPP GSLGWAIDT+FGS E LV K+NSEGAA+QGSGWVWLGLDKD KKLVVETTANQDP
Sbjct: 115 GEPPKGSLGWAIDTHFGSMEALVAKINSEGAAVQGSGWVWLGLDKDLKKLVVETTANQDP 174

Query: 608 LVTKGASLVPLLGIDVWEHAYYLQYKNVRPDYLKNIWKVINWKYSNEVYEKEC 766
           LVTKG +LVPLLGIDVWEHAYYLQYKNVRPDYLKN+WKVI+WKY++EVYEKEC
Sbjct: 175 LVTKGPNLVPLLGIDVWEHAYYLQYKNVRPDYLKNVWKVIDWKYASEVYEKEC 227


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