BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00005563
         (6293 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002276633.2| PREDICTED: protein RRP5 homolog [Vitis vinif...  2227   0.0  
emb|CBI29966.3| unnamed protein product [Vitis vinifera]             2203   0.0  
ref|XP_003535096.1| PREDICTED: protein RRP5 homolog [Glycine max]    2004   0.0  
ref|XP_004144698.1| PREDICTED: protein RRP5 homolog [Cucumis sat...  1912   0.0  
ref|NP_187803.4| RNA binding protein [Arabidopsis thaliana] gi|3...  1909   0.0  

>ref|XP_002276633.2| PREDICTED: protein RRP5 homolog [Vitis vinifera]
          Length = 1879

 Score = 2227 bits (5772), Expect = 0.0
 Identities = 1156/1943 (59%), Positives = 1426/1943 (73%), Gaps = 15/1943 (0%)
 Frame = +3

Query: 60   MAKPQQNKQPMKTKPN---KNPSLKPQXXXXXXRKQSNDS--SSLKPMQIEDDVPDFPRG 224
            MA P +   P K+K +   +  S KP       R + N++  S    +Q+EDDVPDFPRG
Sbjct: 1    MAPPSKKSHPKKSKRDDKLRGASKKP----FKPRMRQNEAVPSESLALQMEDDVPDFPRG 56

Query: 225  GGSLLSRKXXXXXXXXXXXXXXKEQFIGLSXXXXXXXXXXXSYLEEDDFGSLFGEGVTGK 404
            GGSLLSR+                +                +Y  EDD GSLFG+G+TGK
Sbjct: 57   GGSLLSRQEHDAIRAEVDAEFEAGER-KTKKKNKNAKKTKKNYALEDDMGSLFGDGITGK 115

Query: 405  LPKYANKITLKNVSAGMKLWGVISEVNEKDLVVNLPGGLRGLIRASEASDLIAENEIKDT 584
            LP++ANKITLKN+S GMKLWGV++EVNEKDL ++LPGGLRGL+RASEA D +  NEIKD 
Sbjct: 116  LPRFANKITLKNISPGMKLWGVVAEVNEKDLGISLPGGLRGLVRASEAFDPLFSNEIKDA 175

Query: 585  EHNFLSSIFXXXXXXXXXXXXXXXXKSDTKGKMKIWLSLRLGLLKKSFTLHAVQEGMVLT 764
            E  FL  IF                K + KGK +IWLSLRL LL K FTL A+QEGMVLT
Sbjct: 176  EGIFLPRIFHIGQLVSCVVLQLDDDKKE-KGKRRIWLSLRLSLLHKGFTLDALQEGMVLT 234

Query: 765  AYVKSIEDHGYILQFGLSSFSGFLPRRNKDGCEMKVNAGQLLQGVVRNIDNARRVVHMSS 944
            AYVKSIEDHGYIL FGL SF+GFLP+ ++    +++N GQ+LQGV+R+ID A +VV++SS
Sbjct: 235  AYVKSIEDHGYILHFGLPSFTGFLPKSSQADQNIEINTGQILQGVIRSIDKAHKVVYLSS 294

Query: 945  DPDIVSKCVTKDVKGISIDLLVPGMMVNARVQSTLENGIMLSFLSYFTGTVDIFHLENTC 1124
            DPD +SKCVTKD+KGISIDLL+PGMMVNARVQST ENG+MLSFL+YFTGTVDIFHL+ T 
Sbjct: 295  DPDTISKCVTKDLKGISIDLLIPGMMVNARVQSTFENGVMLSFLTYFTGTVDIFHLQTTF 354

Query: 1125 PSTAWKEEYNQHKKVNARILFIDPSTRAVGLTMNPHLVHNKAPPSHVQIGEIYDRSRIVR 1304
            PS+ WK++YNQ+KKVNARILFIDPSTRAVGLT+NPHLV+NKAPP  V+ G+IYD S+++R
Sbjct: 355  PSSNWKDDYNQNKKVNARILFIDPSTRAVGLTLNPHLVNNKAPPCPVKTGDIYDHSKVIR 414

Query: 1305 VDRGMGLLLDIPSAPVSTPGYVSIFDVSDXXXXXXXXXXXXGNHVRVRIVGFRHLEGQAM 1484
            VDRG+GLLL++PS P STP YV+  +               G+HVRVRI+GFR+LEG AM
Sbjct: 415  VDRGLGLLLEVPSTPASTPTYVTYKE---------------GSHVRVRILGFRNLEGLAM 459

Query: 1485 GIMKASAFEGSVFTHSDVKPGMVVKGKVISVENFGAFVQFYSGVKALCPLPHMSELDIVK 1664
            G +KASAFEGSVFTHSDVKPGMVVK KVI+V++FGA VQF SGVKALCPL HMSE DIVK
Sbjct: 460  GTLKASAFEGSVFTHSDVKPGMVVKAKVIAVDSFGAIVQFPSGVKALCPLRHMSEFDIVK 519

Query: 1665 PRKKFKVGAELVFRVLGCKSKRITVTHXXXXXXXXXXXXXXYADAAEGLVTHGWITKIEK 1844
            PRKKFKVGAEL+FRVLGCKSKRITVTH              Y DA EGL+THGWITKIEK
Sbjct: 520  PRKKFKVGAELIFRVLGCKSKRITVTHKKTLLKSKLGIISSYTDATEGLITHGWITKIEK 579

Query: 1845 HGCFVRFYNGVQGFASRTEVGLEPGVEPSSMYHVGQVVKCRVVSAIPDSRRINLSFNISP 2024
            HGCF+RFYNGVQGFA  +E+GLEPG   S MYHVGQVVKCRV  ++P SRRINL+     
Sbjct: 580  HGCFIRFYNGVQGFAPSSELGLEPGCNTSLMYHVGQVVKCRVKGSVPASRRINLN----- 634

Query: 2025 ARGAVEDIIKLGAVVSAIVERMTPKAVIVKVNANGYIKGTILNEHLADQQGQATLMRSLL 2204
                  D++KLG+VV  +V+R+TP A+IV V+A GY+KGTI  EHLAD QG A LM+S L
Sbjct: 635  ------DMVKLGSVVGGVVDRVTPHAIIVNVSAKGYLKGTISTEHLADHQGHAALMKSTL 688

Query: 2205 KPGYEFDQLLVLDFEGNSVVLSAKHSLINSAKQLPVDVAQFHPHLLTHGYICNVIDSGCF 2384
            KPGYEFDQLLVLD EGN+ +LSAK+SLINSA+QLP+D+ Q HP+ + HGYICN+I++GCF
Sbjct: 689  KPGYEFDQLLVLDVEGNNFILSAKYSLINSAQQLPLDLTQIHPNSVVHGYICNIIETGCF 748

Query: 2385 VRFLGRVTAFSPKHKAADDQIADTSEAFYIGQSVRGEVLNVDSETGRITLSLKQSSCFST 2564
            VRFLGR+T FSP++K  DDQ A  SEAF+IGQSVR  +L+V+SETGRITLSLKQS C ST
Sbjct: 749  VRFLGRLTGFSPRNKVMDDQRAVPSEAFFIGQSVRSNILDVNSETGRITLSLKQSCCSST 808

Query: 2565 DASFIQAYFLWEEKIAKLQLSDSEKSDYKWLESLSVGNVVEGKVHEAKEFGVVLSFKEHN 2744
            DASFIQ YFL EEKIAKLQLSDSE S+ KW E  ++G V+EGK+H+AK+FGVV+SF+++N
Sbjct: 809  DASFIQEYFLLEEKIAKLQLSDSEHSELKWAEGFNIGTVIEGKIHDAKDFGVVISFEKYN 868

Query: 2745 DVFGFISHYQLGGTTLETGSIVQAVVLDIAKGERLVDLSLKPDLVSRFKDQLKYPTQKKS 2924
            DVFGFI+HYQL   T E GS VQAVVLD+AK ERLVDLSLKP+ + R K+     +Q   
Sbjct: 869  DVFGFITHYQL---TAERGSTVQAVVLDVAKTERLVDLSLKPEFLDRHKED-SSNSQAGK 924

Query: 2925 QKRKKDLSLNLEVHQTVNAIVEIVKENYLVLSLPGCSHAIGYASIADYNTQKLPHRHFVN 3104
            +KR+++    L+ HQTVNAIVEIVKENYLVLSLP  ++AIGYAS++DYNTQK   + F++
Sbjct: 925  KKRRREAYKELQPHQTVNAIVEIVKENYLVLSLPEYNYAIGYASVSDYNTQKFAQKQFLH 984

Query: 3105 GQSVVATVGALPAPSTTGRXXXXXXXXXXXXXXXXXXXXXXXXXYNVGSFVEAEITEIKP 3284
            GQSV+A+V ALP+PST GR                         YNVGS V+AEITEIKP
Sbjct: 985  GQSVIASVMALPSPSTVGRLLLVLKSVSEATETSSSKRAKKKSSYNVGSLVQAEITEIKP 1044

Query: 3285 LEMRLKFGFGFRGRVHITEANDDQTVEDPLTKFKVGQTLTARVVEKVNQSETNRKNYQWE 3464
            LE+RLKFG GF GRVHITE  D+  +E+P + F++GQT++AR+V K N+SE N KN+QWE
Sbjct: 1045 LELRLKFGIGFHGRVHITEVCDENVIENPFSNFRIGQTVSARIVAKANKSENNGKNHQWE 1104

Query: 3465 LSIKSAVLSESGDIEDGL-SGECNFCPGKRVSGYVVAVDNEWAWLTISRCVKAQLFLLDS 3641
            LSIK  +L+ S ++E+ L   E     G+RV+GYV  V+NEW WLTISR +KAQLFLLD+
Sbjct: 1105 LSIKPEMLTGSIEVENKLVDAEFRISTGQRVTGYVYKVENEWIWLTISRHIKAQLFLLDT 1164

Query: 3642 SCEPRDLQEFQKRFTIGKSITGHILSFNKEKRIIRLLLRPLSVVPNGIADNSGRIVS--- 3812
            SCEP +LQEFQKRF +GK+++G++LS NKEK+++R++L   S V NG  D  G++++   
Sbjct: 1165 SCEPNELQEFQKRFEVGKAVSGYVLSANKEKKLLRMVLHQFS-VSNGTLD--GKVLNIDN 1221

Query: 3813 ------VEKVGAHIVEGDVLGGRISKILSGVGGLLVQIGPHLYGKVHFTELTDKWVANPL 3974
                  +E +  HI +GD LGGRISKIL GVGGLLVQIGPHLYGKVHFTEL D WV++PL
Sbjct: 1222 QHCNPPIENLIPHIHKGDTLGGRISKILPGVGGLLVQIGPHLYGKVHFTELKDSWVSDPL 1281

Query: 3975 SDYEEGQFVKCKVLEISRSVTGNVHFDLSLRGFRDGTQILNSSGVQNDQEFPTTRYEKIE 4154
            S Y EGQFVKCKVLEI  S  G VH DLSL    +G               P +R EKI+
Sbjct: 1282 SGYHEGQFVKCKVLEIGHSEKGTVHVDLSLWSSLNG------------MHSPNSRVEKID 1329

Query: 4155 KLQKNMIVQGFVKNVMSKGCFIMLSRKVDAKVLISNLSNGFVENPEKEFPVGKLVQGKVL 4334
             L  +M+VQG+VKNV SKGCFI+LSRK+DA++L++NLS+G+VE PE+EFP+GKLV G+VL
Sbjct: 1330 NLHSDMLVQGYVKNVTSKGCFILLSRKLDARILLANLSDGYVEKPEREFPIGKLVSGRVL 1389

Query: 4335 SVEPLSKRVEVTLKTESGVESSDTRRGDFSSLQVGAVVSGSIKRIESFGLFITLEHTNMV 4514
            SVEPLS+RVEVTLKT S      +   DFSS+ VG ++ G+IKR+ES+GLFIT++ TNMV
Sbjct: 1390 SVEPLSRRVEVTLKTSSATSVQKSEVNDFSSILVGDIIFGTIKRVESYGLFITIDDTNMV 1449

Query: 4515 GLCHVSEVSDEQTEDIDSKYRVGERVVAKILKVDTERHRISLGMRESYLTNDSDDHKLLD 4694
            GLCH+SE+SD+   +I++KY+ GERV AKILKVD ERHRISLGM+ SY+   + ++  +D
Sbjct: 1450 GLCHISELSDDHISNIETKYKAGERVAAKILKVDEERHRISLGMKNSYIKETTQNNGFVD 1509

Query: 4695 QYTVXXXXXXXXXXXXHMTTQTIDTSGADDVENGSANGIYPDLAYVASRASIPPLEVTLD 4874
               +                Q +D    D+         YP L+ V SRASI PLEV LD
Sbjct: 1510 DTQL-----STFLENNSREIQNLDVEYEDEE--------YPVLSQVESRASILPLEVDLD 1556

Query: 4875 DMEGSDPGDFGGENQEHLNEASTTTXXXXXXXXXXXXXXXXXXXXXXXQRLLEKDIPRTA 5054
            D+  S+  D  G+N  + NE +T                         +RL+  D+PRTA
Sbjct: 1557 DVNHSNLDDAVGQNHIYTNETNTIDEKSKRRAKKKAKEEKEQEIRAAEERLMLNDVPRTA 1616

Query: 5055 DEFDKLVRSSPNSSFLWIKYMAFMLSLGEIENARAIAKRALATISFREEAEKLNVWVAYF 5234
            DEF+KLVR SPNSSFLWIKYMA MLSL +IE AR+IA+RAL TI+ REE+EKLN+W+AYF
Sbjct: 1617 DEFEKLVRGSPNSSFLWIKYMALMLSLADIEKARSIAERALRTINIREESEKLNIWMAYF 1676

Query: 5235 NLENEYGNPPEEAVAEVFKEALQYCDREKVHLALLGVYERTDQYKLADEHLDQMVKKYKK 5414
            NLENEYGNPPEEAV +VF+ ALQYCD +KVHLALLG+YERT+Q+KLADE L++M KK+K 
Sbjct: 1677 NLENEYGNPPEEAVVKVFQRALQYCDPKKVHLALLGMYERTEQHKLADELLEKMTKKFKH 1736

Query: 5415 SCEVWLRRIKSHLKQGKDGIDAIVKDALHKLDKHEHIKFKSQTAILAFKCGVPDTGRSLF 5594
            SC+VWLRR+++ LKQ +DG+  ++  AL  L +H+HIKF SQTAIL FK GVPD GRS+F
Sbjct: 1737 SCKVWLRRVQNVLKQHQDGVQPVINRALLCLPRHKHIKFISQTAILEFKSGVPDRGRSMF 1796

Query: 5595 ELLLRENPNRTDLWNVYLDQEIRLGDEEVIRALFERATXXXXXXXXXXXXXXXYLEFEKG 5774
            E +LRE P RTDLW+VYLDQEIRLGD ++IRALFERA                YLE+EK 
Sbjct: 1797 EGMLREYPKRTDLWSVYLDQEIRLGDIDIIRALFERAINLSLEPRKMKFLFKKYLEYEKS 1856

Query: 5775 HGDEDRVEYVKRKAIECVENSLA 5843
             GDE+R+E VKRKA+E   ++LA
Sbjct: 1857 QGDEERIESVKRKAMEYANSTLA 1879


>emb|CBI29966.3| unnamed protein product [Vitis vinifera]
          Length = 1862

 Score = 2203 bits (5708), Expect = 0.0
 Identities = 1144/1935 (59%), Positives = 1409/1935 (72%), Gaps = 7/1935 (0%)
 Frame = +3

Query: 60   MAKPQQNKQPMKTKPN---KNPSLKPQXXXXXXRKQSNDS--SSLKPMQIEDDVPDFPRG 224
            MA P +   P K+K +   +  S KP       R + N++  S    +Q+EDDVPDFPRG
Sbjct: 1    MAPPSKKSHPKKSKRDDKLRGASKKP----FKPRMRQNEAVPSESLALQMEDDVPDFPRG 56

Query: 225  GGSLLSRKXXXXXXXXXXXXXXKEQFIGLSXXXXXXXXXXXSYLEEDDFGSLFGEGVTGK 404
            GGSLLSR+                +                +Y  EDD GSLFG+G+TGK
Sbjct: 57   GGSLLSRQEHDAIRAEVDAEFEAGER-KTKKKNKNAKKTKKNYALEDDMGSLFGDGITGK 115

Query: 405  LPKYANKITLKNVSAGMKLWGVISEVNEKDLVVNLPGGLRGLIRASEASDLIAENEIKDT 584
            LP++ANKITLKN+S GMKLWGV++EVNEKDL ++LPGGLRGL+RASEA D +  NEIKD 
Sbjct: 116  LPRFANKITLKNISPGMKLWGVVAEVNEKDLGISLPGGLRGLVRASEAFDPLFSNEIKDA 175

Query: 585  EHNFLSSIFXXXXXXXXXXXXXXXXKSDTKGKMKIWLSLRLGLLKKSFTLHAVQEGMVLT 764
            E  FL  IF                K + KGK +IWLSLRL LL K FTL A+QEGMVLT
Sbjct: 176  EGIFLPRIFHIGQLVSCVVLQLDDDKKE-KGKRRIWLSLRLSLLHKGFTLDALQEGMVLT 234

Query: 765  AYVKSIEDHGYILQFGLSSFSGFLPRRNKDGCEMKVNAGQLLQGVVRNIDNARRVVHMSS 944
            AYVKSIEDHGYIL FGL SF+GFLP+ ++    +++N GQ+LQGV+R+ID A +VV++SS
Sbjct: 235  AYVKSIEDHGYILHFGLPSFTGFLPKSSQAE-NIEINTGQILQGVIRSIDKAHKVVYLSS 293

Query: 945  DPDIVSKCVTKDVKGISIDLLVPGMMVNARVQSTLENGIMLSFLSYFTGTVDIFHLENTC 1124
            DPD +SKCVTKD+KGISIDLL+PGMMVNARVQST ENG+MLSFL+YFTGTVDIFHL+ T 
Sbjct: 294  DPDTISKCVTKDLKGISIDLLIPGMMVNARVQSTFENGVMLSFLTYFTGTVDIFHLQTTF 353

Query: 1125 PSTAWKEEYNQHKKVNARILFIDPSTRAVGLTMNPHLVHNKAPPSHVQIGEIYDRSRIVR 1304
            PS+ WK++YNQ+KKVNARILFIDPSTRAVGLT+NPHLV+NKAPP  V+ G+IYD S+++R
Sbjct: 354  PSSNWKDDYNQNKKVNARILFIDPSTRAVGLTLNPHLVNNKAPPCPVKTGDIYDHSKVIR 413

Query: 1305 VDRGMGLLLDIPSAPVSTPGYVSIFDVSDXXXXXXXXXXXXGNHVRVRIVGFRHLEGQAM 1484
            VDRG+GLLL++PS P STP YV++FDV+D            G+HVRVRI+GFR+LEG AM
Sbjct: 414  VDRGLGLLLEVPSTPASTPTYVTLFDVADEEVRKMEKKYKEGSHVRVRILGFRNLEGLAM 473

Query: 1485 GIMKASAFEGSVFTHSDVKPGMVVKGKVISVENFGAFVQFYSGVKALCPLPHMSELDIVK 1664
            G +KASAFEGSVFTHSDVKPGMVVK KVI+V++FGA VQF SGVKALCPL HMSE DIVK
Sbjct: 474  GTLKASAFEGSVFTHSDVKPGMVVKAKVIAVDSFGAIVQFPSGVKALCPLRHMSEFDIVK 533

Query: 1665 PRKKFKVGAELVFRVLGCKSKRITVTHXXXXXXXXXXXXXXYADAAEGLVTHGWITKIEK 1844
            PRKKFKVGAEL+FRVLGCKSKRITVTH              Y DA EGL+THGWITKIEK
Sbjct: 534  PRKKFKVGAELIFRVLGCKSKRITVTHKKTLLKSKLGIISSYTDATEGLITHGWITKIEK 593

Query: 1845 HGCFVRFYNGVQGFASRTEVGLEPGVEPSSMYHVGQVVKCRVVSAIPDSRRINLSFNISP 2024
            HGCF+RFYNGVQGFA  +E+GLEPG   S MYHVGQVVKCRV  ++P SRRINLSF I P
Sbjct: 594  HGCFIRFYNGVQGFAPSSELGLEPGCNTSLMYHVGQVVKCRVKGSVPASRRINLSFIIKP 653

Query: 2025 ARGAVEDIIKLGAVVSAIVERMTPKAVIVKVNANGYIKGTILNEHLADQQGQATLMRSLL 2204
             R + +D++KLG+VV  +V+R+TP A+IV V+A GY+KGTI  EHLAD QG A LM+S L
Sbjct: 654  TRISEDDMVKLGSVVGGVVDRVTPHAIIVNVSAKGYLKGTISTEHLADHQGHAALMKSTL 713

Query: 2205 KPGYEFDQLLVLDFEGNSVVLSAKHSLINSAKQLPVDVAQFHPHLLTHGYICNVIDSGCF 2384
            KPGYEFDQLLVLD EGN+ +LSAK+SLINSA+QLP+D+ Q HP+ + HGYICN+I++GCF
Sbjct: 714  KPGYEFDQLLVLDVEGNNFILSAKYSLINSAQQLPLDLTQIHPNSVVHGYICNIIETGCF 773

Query: 2385 VRFLGRVTAFSPKHKAADDQIADTSEAFYIGQSVRGEVLNVDSETGRITLSLKQSSCFST 2564
            VRFLGR+T FSP++K  DDQ A  SEAF+IGQSVR  +L+V+SETGRITLSLKQS C ST
Sbjct: 774  VRFLGRLTGFSPRNKVMDDQRAVPSEAFFIGQSVRSNILDVNSETGRITLSLKQSCCSST 833

Query: 2565 DASFIQAYFLWEEKIAKLQLSDSEKSDYKWLESLSVGNVVEGKVHEAKEFGVVLSFKEHN 2744
            DASFIQ YFL EEKIAKLQLSDSE S+ KW E  ++G V+EGK+H+AK+FGVV+SF+++N
Sbjct: 834  DASFIQEYFLLEEKIAKLQLSDSEHSELKWAEGFNIGTVIEGKIHDAKDFGVVISFEKYN 893

Query: 2745 DVFGFISHYQLGGTTLETGSIVQAVVLDIAKGERLVDLSLKPDLVSRFKDQLKYPTQKKS 2924
            DVFGFI+HYQL   T E GS VQAVVLD+AK ERLVDLSLKP+ + R K+     +Q   
Sbjct: 894  DVFGFITHYQL---TAERGSTVQAVVLDVAKTERLVDLSLKPEFLDRHKED-SSNSQAGK 949

Query: 2925 QKRKKDLSLNLEVHQTVNAIVEIVKENYLVLSLPGCSHAIGYASIADYNTQKLPHRHFVN 3104
            +KR+++    L+ HQTVNAIVEIVKENYL  S                    +  + F++
Sbjct: 950  KKRRREAYKELQPHQTVNAIVEIVKENYLASSF-------------------IARKQFLH 990

Query: 3105 GQSVVATVGALPAPSTTGRXXXXXXXXXXXXXXXXXXXXXXXXXYNVGSFVEAEITEIKP 3284
            GQSV+A+V ALP+PST GR                         YNVGS V+AEITEIKP
Sbjct: 991  GQSVIASVMALPSPSTVGRLLLVLKSVSEATETSSSKRAKKKSSYNVGSLVQAEITEIKP 1050

Query: 3285 LEMRLKFGFGFRGRVHITEANDDQTVEDPLTKFKVGQTLTARVVEKVNQSETNRKNYQWE 3464
            LE+RLKFG GF GRVHITE  D+  +E+P + F++GQT++AR+V K N+SE N KN+QWE
Sbjct: 1051 LELRLKFGIGFHGRVHITEVCDENVIENPFSNFRIGQTVSARIVAKANKSENNGKNHQWE 1110

Query: 3465 LSIKSAVLSESGDIEDGL-SGECNFCPGKRVSGYVVAVDNEWAWLTISRCVKAQLFLLDS 3641
            LSIK  +L+ S ++E+ L   E     G+RV+GYV  V+NEW WLTISR +KAQLFLLD+
Sbjct: 1111 LSIKPEMLTGSIEVENKLVDAEFRISTGQRVTGYVYKVENEWIWLTISRHIKAQLFLLDT 1170

Query: 3642 SCEPRDLQEFQKRFTIGKSITGHILSFNKEKRIIRLLLRPLS-VVPNGIADNSGRIVSVE 3818
            SCEP +LQEFQKRF +GK+++G++LS NKEK+++R++L   S ++P              
Sbjct: 1171 SCEPNELQEFQKRFEVGKAVSGYVLSANKEKKLLRMVLHQFSNLIP-------------- 1216

Query: 3819 KVGAHIVEGDVLGGRISKILSGVGGLLVQIGPHLYGKVHFTELTDKWVANPLSDYEEGQF 3998
                HI +GD LGGRISKIL GVGGLLVQIGPHLYGKVHFTEL D WV++PLS Y EGQF
Sbjct: 1217 ----HIHKGDTLGGRISKILPGVGGLLVQIGPHLYGKVHFTELKDSWVSDPLSGYHEGQF 1272

Query: 3999 VKCKVLEISRSVTGNVHFDLSLRGFRDGTQILNSSGVQNDQEFPTTRYEKIEKLQKNMIV 4178
            VKCKVLEI  S  G VH DLSL    +G               P +R EKI+ L  +M+V
Sbjct: 1273 VKCKVLEIGHSEKGTVHVDLSLWSSLNG------------MHSPNSRVEKIDNLHSDMLV 1320

Query: 4179 QGFVKNVMSKGCFIMLSRKVDAKVLISNLSNGFVENPEKEFPVGKLVQGKVLSVEPLSKR 4358
            QG+VKNV SKGCFI+LSRK+DA++L++NLS+G+VE PE+EFP+GKLV G+VLSVEPLS+R
Sbjct: 1321 QGYVKNVTSKGCFILLSRKLDARILLANLSDGYVEKPEREFPIGKLVSGRVLSVEPLSRR 1380

Query: 4359 VEVTLKTESGVESSDTRRGDFSSLQVGAVVSGSIKRIESFGLFITLEHTNMVGLCHVSEV 4538
            VEVTLKT S      +   DFSS+ VG ++ G+IKR+ES+GLFIT++ TNMVGLCH+SE+
Sbjct: 1381 VEVTLKTSSATSVQKSEVNDFSSILVGDIIFGTIKRVESYGLFITIDDTNMVGLCHISEL 1440

Query: 4539 SDEQTEDIDSKYRVGERVVAKILKVDTERHRISLGMRESYLTNDSDDHKLLDQYTVXXXX 4718
            SD+   +I++KY+ GERV AKILKVD ERHRISLGM+ SY+   + ++  +D   +    
Sbjct: 1441 SDDHISNIETKYKAGERVAAKILKVDEERHRISLGMKNSYIKETTQNNGFVDDTQL---- 1496

Query: 4719 XXXXXXXXHMTTQTIDTSGADDVENGSANGIYPDLAYVASRASIPPLEVTLDDMEGSDPG 4898
                        Q +D    D+         YP L+ V SRASI PLEV LDD+  S+  
Sbjct: 1497 -STFLENNSREIQNLDVEYEDEE--------YPVLSQVESRASILPLEVDLDDVNHSNLD 1547

Query: 4899 DFGGENQEHLNEASTTTXXXXXXXXXXXXXXXXXXXXXXXQRLLEKDIPRTADEFDKLVR 5078
            D  G+N  + NE +T                         +RL+  D+PRTADEF+KLVR
Sbjct: 1548 DAVGQNHIYTNETNTIDEKSKRRAKKKAKEEKEQEIRAAEERLMLNDVPRTADEFEKLVR 1607

Query: 5079 SSPNSSFLWIKYMAFMLSLGEIENARAIAKRALATISFREEAEKLNVWVAYFNLENEYGN 5258
             SPNSSFLWIKYMA MLSL +IE AR+IA+RAL TI+ REE+EKLN+W+AYFNLENEYGN
Sbjct: 1608 GSPNSSFLWIKYMALMLSLADIEKARSIAERALRTINIREESEKLNIWMAYFNLENEYGN 1667

Query: 5259 PPEEAVAEVFKEALQYCDREKVHLALLGVYERTDQYKLADEHLDQMVKKYKKSCEVWLRR 5438
            PPEEAV +VF+ ALQYCD +KVHLALLG+YERT+Q+KLADE L++M KK+K SC+VWLRR
Sbjct: 1668 PPEEAVVKVFQRALQYCDPKKVHLALLGMYERTEQHKLADELLEKMTKKFKHSCKVWLRR 1727

Query: 5439 IKSHLKQGKDGIDAIVKDALHKLDKHEHIKFKSQTAILAFKCGVPDTGRSLFELLLRENP 5618
            +++ LKQ +DG+  ++  AL  L +H+HIKF SQTAIL FK GVPD GRS+FE +LRE P
Sbjct: 1728 VQNVLKQHQDGVQPVINRALLCLPRHKHIKFISQTAILEFKSGVPDRGRSMFEGMLREYP 1787

Query: 5619 NRTDLWNVYLDQEIRLGDEEVIRALFERATXXXXXXXXXXXXXXXYLEFEKGHGDEDRVE 5798
             RTDLW+VYLDQEIRLGD ++IRALFERA                YLE+EK  GDE+R+E
Sbjct: 1788 KRTDLWSVYLDQEIRLGDIDIIRALFERAINLSLEPRKMKFLFKKYLEYEKSQGDEERIE 1847

Query: 5799 YVKRKAIECVENSLA 5843
             VKRKA+E   ++LA
Sbjct: 1848 SVKRKAMEYANSTLA 1862


>ref|XP_003535096.1| PREDICTED: protein RRP5 homolog [Glycine max]
          Length = 1885

 Score = 2004 bits (5191), Expect = 0.0
 Identities = 1047/1929 (54%), Positives = 1354/1929 (70%), Gaps = 5/1929 (0%)
 Frame = +3

Query: 63   AKPQQNKQPMKTKPNKNPS----LKPQXXXXXXRKQSNDSSSLKPMQIEDDVPDFPRGGG 230
            +K  Q K     KP  + +     KP+         +  S +L  + +ED+VPDFPRGG 
Sbjct: 5    SKKPQKKNDSVDKPKIDKASKKIFKPKKREQNIAVAAAKSEALS-LPLEDEVPDFPRGGE 63

Query: 231  -SLLSRKXXXXXXXXXXXXXXKEQFIGLSXXXXXXXXXXXSYLEEDDFGSLFGEGVTGKL 407
             S   R               +++  G +           S    DD+GSL G G+TGKL
Sbjct: 64   FSAKGRNDYDEFGAEDPSKKTRKKKKGKNASGK-------SNEAADDWGSLSGNGITGKL 116

Query: 408  PKYANKITLKNVSAGMKLWGVISEVNEKDLVVNLPGGLRGLIRASEASDLIAENEIKDTE 587
            P+  NKITL+N++ GMKLWGV++EVNEKDLVV+LPGGLRGL+ AS+A D I +++I+  E
Sbjct: 117  PRRVNKITLRNITPGMKLWGVVAEVNEKDLVVSLPGGLRGLVHASDAVDPIFDDKIEVGE 176

Query: 588  HNFLSSIFXXXXXXXXXXXXXXXXKSDTKGKMKIWLSLRLGLLKKSFTLHAVQEGMVLTA 767
              FLS +F                K + KG  KIWLSLRL LL K++ L  VQEGMVL A
Sbjct: 177  I-FLSGVFCVGQLVSCVVLRLDDDKKE-KGSRKIWLSLRLSLLHKNYNLDVVQEGMVLAA 234

Query: 768  YVKSIEDHGYILQFGLSSFSGFLPRRNKDGCEMKVNAGQLLQGVVRNIDNARRVVHMSSD 947
            YVKSIEDHGYIL FGL  F GFLP+ +  G   +V  G+LLQG+VR+ID  R+VV++SSD
Sbjct: 235  YVKSIEDHGYILHFGLPFFMGFLPKNSSAGWGGEVKIGKLLQGLVRSIDKVRKVVYLSSD 294

Query: 948  PDIVSKCVTKDVKGISIDLLVPGMMVNARVQSTLENGIMLSFLSYFTGTVDIFHLENTCP 1127
            PD ++K VTKD++G+SIDLLVPGM+VNA V+S LENG+MLSFL+YFTGTVD+FHL+N  P
Sbjct: 295  PDTITKSVTKDLRGLSIDLLVPGMLVNACVKSILENGVMLSFLTYFTGTVDLFHLQNIYP 354

Query: 1128 STAWKEEYNQHKKVNARILFIDPSTRAVGLTMNPHLVHNKAPPSHVQIGEIYDRSRIVRV 1307
               WK++ ++ +KV +RILFIDPS+RAVGLT+NPHLV N+APPSHV+IG+IYD S++VRV
Sbjct: 355  GKNWKDKCSESQKVVSRILFIDPSSRAVGLTLNPHLVQNRAPPSHVKIGDIYDNSKVVRV 414

Query: 1308 DRGMGLLLDIPSAPVSTPGYVSIFDVSDXXXXXXXXXXXXGNHVRVRIVGFRHLEGQAMG 1487
            DRG+GLLL++PS P  TP +VS  +               GNHVRVRI+G R+LEG A G
Sbjct: 415  DRGLGLLLEVPSIPEPTPAFVSYKE---------------GNHVRVRILGLRYLEGIATG 459

Query: 1488 IMKASAFEGSVFTHSDVKPGMVVKGKVISVENFGAFVQFYSGVKALCPLPHMSELDIVKP 1667
            ++KASA E  VFTHSDVKPGMVVK K++SV++FGA VQ   GVKALCPL HMSEL+I KP
Sbjct: 460  VLKASALEEEVFTHSDVKPGMVVKAKILSVDSFGAIVQIPGGVKALCPLRHMSELEISKP 519

Query: 1668 RKKFKVGAELVFRVLGCKSKRITVTHXXXXXXXXXXXXXXYADAAEGLVTHGWITKIEKH 1847
             KKFKVGAELVFRVLGCKSKR+TVTH              YADA +GL+THGWITKIE H
Sbjct: 520  GKKFKVGAELVFRVLGCKSKRVTVTHKKTLVKSKLGIISSYADATDGLITHGWITKIEVH 579

Query: 1848 GCFVRFYNGVQGFASRTEVGLEPGVEPSSMYHVGQVVKCRVVSAIPDSRRINLSFNISPA 2027
            GCFVRFYNGVQGFA R+E+GLEPG +P ++Y+VGQ VKCRV+S IP SRRINL+      
Sbjct: 580  GCFVRFYNGVQGFAPRSELGLEPGADPGTVYNVGQAVKCRVISCIPASRRINLN------ 633

Query: 2028 RGAVEDIIKLGAVVSAIVERMTPKAVIVKVNANGYIKGTILNEHLADQQGQATLMRSLLK 2207
                 D++ LG++VS  V+R+T  AV+V VNA+G+ +GTI  EHLAD  GQA LM S+LK
Sbjct: 634  -----DMVTLGSLVSGAVDRITSNAVVVYVNASGFSRGTISMEHLADHHGQAILMHSVLK 688

Query: 2208 PGYEFDQLLVLDFEGNSVVLSAKHSLINSAKQLPVDVAQFHPHLLTHGYICNVIDSGCFV 2387
            PGY FDQLLVLD +GN+++LSAK SLI  A+Q+P D+ Q HP+ + HGYICN+I+SGCFV
Sbjct: 689  PGYNFDQLLVLDVKGNNLILSAKSSLIKHAQQIPADINQIHPNSVVHGYICNLIESGCFV 748

Query: 2388 RFLGRVTAFSPKHKAADDQIADTSEAFYIGQSVRGEVLNVDSETGRITLSLKQSSCFSTD 2567
            RFLG +T F+P++KAADDQ ++  EA+YIGQSVR  + NV SETGR+TLSLKQ++C STD
Sbjct: 749  RFLGHLTGFAPRNKAADDQKSNILEAYYIGQSVRSNISNVSSETGRVTLSLKQTACSSTD 808

Query: 2568 ASFIQAYFLWEEKIAKLQLSDSEKSDYKWLESLSVGNVVEGKVHEAKEFGVVLSFKEHND 2747
            ASFIQ YFL ++KIA+L+   S  SD KW E  ++G V +GKV   ++ G+V+SF+ +ND
Sbjct: 809  ASFIQDYFLMDDKIARLEYCGSGASDTKWDEGFNIGMVAKGKVKAVEDVGLVISFEHYND 868

Query: 2748 VFGFISHYQLGGTTLETGSIVQAVVLDIAKGERLVDLSLKPDLVSRFKDQLKYPTQKKSQ 2927
            VFGFI++YQL GT LE+GSIV+A+VLD+ K ++LV+L+LKP+ ++R K+     T KK  
Sbjct: 869  VFGFIANYQLAGTILESGSIVEALVLDVGKADKLVELTLKPEFINRSKESSISRTNKK-- 926

Query: 2928 KRKKDLSLNLEVHQTVNAIVEIVKENYLVLSLPGCSHAIGYASIADYNTQKLPHRHFVNG 3107
            KR+++ S +L +HQTVNA+VEIVKENYLVLS+P   + IGYAS++DYN Q+ PH+ + NG
Sbjct: 927  KRRREASKDLVLHQTVNAVVEIVKENYLVLSIPENDYTIGYASVSDYNAQRFPHKQYQNG 986

Query: 3108 QSVVATVGALPAPSTTGRXXXXXXXXXXXXXXXXXXXXXXXXXYNVGSFVEAEITEIKPL 3287
            QSVVATV ALP+P T+GR                         Y VG+ VEAEIT+IK L
Sbjct: 987  QSVVATVMALPSPETSGR--LLLLVDVVNETSSSSKRTKKKSSYKVGTLVEAEITDIKTL 1044

Query: 3288 EMRLKFGFGFRGRVHITEANDDQTVEDPLTKFKVGQTLTARVVEKVNQSETNRKNYQWEL 3467
            E++LKFGFG  GR+HITE      +E+P + +KVGQT+TAR+V K N+S+ NRK  QWEL
Sbjct: 1045 ELKLKFGFGLYGRIHITEVYYGNVLENPFSSYKVGQTVTARIVAKPNESDGNRKGSQWEL 1104

Query: 3468 SIKSAVLSESGDIEDGLSGECNFCPGKRVSGYVVAVDNEWAWLTISRCVKAQLFLLDSSC 3647
            S++  +++ S DI+D +S    F  G+ V+GYV  V++EW WLTISR V+AQL++LDS+ 
Sbjct: 1105 SVRPEMVTGSSDIDD-VSENLEFKIGQCVAGYVYKVESEWVWLTISRNVRAQLYILDSAT 1163

Query: 3648 EPRDLQEFQKRFTIGKSITGHILSFNKEKRIIRLLLRPLSVVPNGIADNSGRIVSVEKVG 3827
            EP +L++FQ R+ +G+ ++GHILS N EK+++RL++RP S +  G ++     V  + + 
Sbjct: 1164 EPSELEDFQNRYHVGQPVSGHILSVNMEKKLLRLVVRPFSTLSCGTSEEPLTNVVDKDLT 1223

Query: 3828 AHIVEGDVLGGRISKILSGVGGLLVQIGPHLYGKVHFTELTDKWVANPLSDYEEGQFVKC 4007
            A++ EGD+LGGR+SKIL GVGGLLVQ+GP  YGKVHFTEL D WV +PLS Y E QFVKC
Sbjct: 1224 AYVHEGDILGGRVSKILPGVGGLLVQVGPRTYGKVHFTELADTWVPDPLSGYHEEQFVKC 1283

Query: 4008 KVLEISRSVTGNVHFDLSLRGFRDGTQILNSSGVQNDQEFPTTRYEKIEKLQKNMIVQGF 4187
             VLE+S +V G +H DLSL       ++   S V  + +      EKIE L  +MIV+G+
Sbjct: 1284 IVLEVSHTVKGTIHVDLSLGS--SNVKLSQDSAVNANSKC----VEKIEDLHPDMIVKGY 1337

Query: 4188 VKNVMSKGCFIMLSRKVDAKVLISNLSNGFVENPEKEFPVGKLVQGKVLSVEPLSKRVEV 4367
            +KNV SKGCFIMLSRK+DAK+L+SNLS  +V+ PEKEFPVGKLV G+V SVEPLS RVEV
Sbjct: 1338 IKNVTSKGCFIMLSRKIDAKILLSNLSEQYVQEPEKEFPVGKLVIGRVTSVEPLSNRVEV 1397

Query: 4368 TLKTESGVESSDTRRGDFSSLQVGAVVSGSIKRIESFGLFITLEHTNMVGLCHVSEVSDE 4547
            TLK  +      +   D S   VG VVSG IKR+ESFGLFI +++TNMVGLCH+SE+SD 
Sbjct: 1398 TLKMSTAPNIPKSEIIDLSKFHVGDVVSGRIKRVESFGLFIAIDNTNMVGLCHISEISDN 1457

Query: 4548 QTEDIDSKYRVGERVVAKILKVDTERHRISLGMRESYLTNDSDDHKLLDQYTVXXXXXXX 4727
            + E+I++ YR GERV A+ILKVD ERHRISLGM+ SY+  ++    +L   +        
Sbjct: 1458 RIENIEANYRAGERVKARILKVDEERHRISLGMKNSYMRGET----VLQIPSKEESDEPI 1513

Query: 4728 XXXXXHMTTQTIDTSGADDVENGSANGIYPDLAYVASRASIPPLEVTLDDMEGSDPGDFG 4907
                  +T+      G  +++       +P L+    RA IPPL+V LDD +  D  +  
Sbjct: 1514 VDGMKSITSMNSSLFGTSNIDVEDEINQFPILSQAQERADIPPLDVALDDFDQFDANNAN 1573

Query: 4908 GENQEHLNEASTTTXXXXXXXXXXXXXXXXXXXXXXXQRLLEKDIPRTADEFDKLVRSSP 5087
             +++EH NE                            +RLLE D+PRTADEF++L+RSSP
Sbjct: 1574 SQSEEHANEEDIVNEKHKRREKKKAKEEREKQIRAAEERLLEDDVPRTADEFERLIRSSP 1633

Query: 5088 NSSFLWIKYMAFMLSLGEIENARAIAKRALATISFREEAEKLNVWVAYFNLENEYGNPPE 5267
            NSSF WIKYM FM+S+ ++E AR+IA+RAL TI+ REE EKLN+W AYFNLEN+YGNP E
Sbjct: 1634 NSSFTWIKYMDFMVSMADVEKARSIAERALRTINIREENEKLNIWKAYFNLENKYGNPRE 1693

Query: 5268 EAVAEVFKEALQYCDREKVHLALLGVYERTDQYKLADEHLDQMVKKYKKSCEVWLRRIKS 5447
            EAV +VF+ ALQY D +KV+LALLG+YERT+Q+ LADE L++M KK+K SC+VWLRRI+S
Sbjct: 1694 EAVMKVFQRALQYNDPKKVYLALLGMYERTEQHNLADELLNKMTKKFKHSCKVWLRRIQS 1753

Query: 5448 HLKQGKDGIDAIVKDALHKLDKHEHIKFKSQTAILAFKCGVPDTGRSLFELLLRENPNRT 5627
             LKQ KDGI  ++  A   L KH+HIKF SQTAIL FK G PD GRS+FE +LRE P RT
Sbjct: 1754 LLKQNKDGIQPVIDRASLSLPKHKHIKFFSQTAILEFKVGFPDRGRSMFEKILREYPKRT 1813

Query: 5628 DLWNVYLDQEIRLGDEEVIRALFERATXXXXXXXXXXXXXXXYLEFEKGHGDEDRVEYVK 5807
            DLW+VYLDQEI+  DE++I ALFERA                YL++E   GD++R+E VK
Sbjct: 1814 DLWSVYLDQEIQHKDEDIIHALFERAVSLSLPPKKMKFLFKKYLDYEMSQGDQERIESVK 1873

Query: 5808 RKAIECVEN 5834
            RKAIE VE+
Sbjct: 1874 RKAIEYVES 1882


>ref|XP_004144698.1| PREDICTED: protein RRP5 homolog [Cucumis sativus]
          Length = 1898

 Score = 1912 bits (4954), Expect = 0.0
 Identities = 1032/1961 (52%), Positives = 1330/1961 (67%), Gaps = 33/1961 (1%)
 Frame = +3

Query: 60   MAKPQQNKQPMKTKPNKNPSLKPQXXXXXXRKQSNDSSSLKP----MQIEDDVPDFPRGG 227
            MA P +  Q   +K NK+ S KP         +   S + KP    +QIEDDVPDFPRGG
Sbjct: 1    MAPPSRKSQD-GSKFNKH-SKKP------FNSKKKTSETAKPETVSLQIEDDVPDFPRGG 52

Query: 228  GSLLSRKXXXXXXXXXXXXXXKEQFIGLSXXXXXXXXXXXSYLEEDDFGSLFGEGVTGKL 407
            G  +S+                +    L                 DD  SL   GV G L
Sbjct: 53   GGYMSQNKGEKVRAEGDKEFQNDD---LKMTTKRGKKRRKHPSNGDDLESLLNNGVVGNL 109

Query: 408  PKYANKITLKNVSAGMKLWGVISEVNEKDLVVNLPGGLRGLIRASEASDLIAENEIKDTE 587
            PKYANKITLKN++  MK WGV++EVN+KDLV++LPGGLRGL+ A+EA D I E E++DTE
Sbjct: 110  PKYANKITLKNINPRMKFWGVVAEVNKKDLVISLPGGLRGLVSAAEAFDPILEKEVEDTE 169

Query: 588  HNFLSSIFXXXXXXXXXXXXXXXXKSDTKGKMKIWLSLRLGLLKKSFTLHAVQEGMVLTA 767
            H+ L  +F                K ++ GK KIWLSLRL +L K FTL  +QEGMVLT+
Sbjct: 170  HDLLPVMFHVGQLVPCVVLKVDDDKKES-GKRKIWLSLRLSMLYKDFTLDLLQEGMVLTS 228

Query: 768  YVKSIEDHGYILQFGLSSFSGFLPRRNKDGCEMKVNAGQLLQGVVRNIDNARRVVHMSSD 947
            YVKSIEDHGYIL FGL+SF+GFLP+  + G +  ++ GQLLQ VVR+ID  R+VV+ SSD
Sbjct: 229  YVKSIEDHGYILHFGLTSFTGFLPKTKQSGKKSLLHVGQLLQCVVRSIDKTRKVVYFSSD 288

Query: 948  PDIVSKCVTKDVKGISIDLLVPGMMVNARVQSTLENGIMLSFLSYFTGTVDIFHLENTCP 1127
             DIVS  V KD+KGISIDLL+PGMMV+ARVQSTLENGI+LSFL+YF GTVD+FHL+N+  
Sbjct: 289  QDIVSSSVAKDLKGISIDLLIPGMMVSARVQSTLENGILLSFLTYFNGTVDMFHLQNSFH 348

Query: 1128 STAWKEEYNQHKKVNARILFIDPSTRAVGLTMNPHLVHNKAPPSHVQIGEIYDRSRIVRV 1307
            S+ WK+ YNQ+ K+NARILFIDPSTRAVGLT+ PHLV NKA P HV+IG+IYD +++VRV
Sbjct: 349  SSNWKDFYNQNMKMNARILFIDPSTRAVGLTLIPHLVRNKAAPPHVRIGDIYDSAKVVRV 408

Query: 1308 DRGMGLLLDIPSAPVSTPGYVSIFDVSDXXXXXXXXXXXXGNHVRVRIVGFRHLEGQAMG 1487
            DRG GLLL++PS+P STP +VS  +               G+ VRVRI+GFRHLEG A+G
Sbjct: 409  DRGFGLLLEVPSSPESTPTFVSFKE---------------GSRVRVRILGFRHLEGLAIG 453

Query: 1488 IMKASAFEGSVFTHSDVKPGMVVKGKVISVENFGAFVQFYSGVKALCPLPHMSELDIVKP 1667
             +KASAFEG VF++SDVKPG +++ KVI V++FGA VQF  G+KALCPL HMSE +I KP
Sbjct: 454  TLKASAFEGPVFSYSDVKPGTLIRAKVIVVDDFGAIVQFPGGLKALCPLSHMSEFEIAKP 513

Query: 1668 RKKFKVGAELVFRVLGCKSKRITVTHXXXXXXXXXXXXXXYADAAEGLVTHGWITKIEKH 1847
            RKKFKVGAEL+FRVLGCKSKRITVTH              YADA  GLVTHGWITKIEKH
Sbjct: 514  RKKFKVGAELIFRVLGCKSKRITVTHKKTLVKSKLEVLSSYADATAGLVTHGWITKIEKH 573

Query: 1848 GCFVRFYNGVQGFASRTEVGLEPGVEPSSMYHVGQVVKCRVVSAIPDSRRINLSFNISPA 2027
            GCFVRFYNGVQGFA R E+G+EPG +PSS YH+GQV+KCR+ S+   S+RI+L+      
Sbjct: 574  GCFVRFYNGVQGFAPRFELGIEPGSDPSSTYHIGQVIKCRITSSTHSSKRISLNTK---- 629

Query: 2028 RGAVEDIIKLGAVVSAIVERMTPKAVIVKVNANGYIKGTILNEHLADQQGQATLMRSLLK 2207
                   ++LG +V+ +V+ +T   V + +N   Y +G I  EHL+D Q  A+ ++S+LK
Sbjct: 630  -------VELGCIVTGVVDEITETHVTLYINRTDYSRGRISTEHLSDHQAHASSIKSVLK 682

Query: 2208 PGYEFDQLLVLDFEGNSVVLSAKHSLINSAKQLPVDVAQFHPHLLTHGYICNVIDSGCFV 2387
            PGY+FDQLLVL  EG S++LSAK SLI  A  LP D +  +P+ + HG+ICN+I++GCFV
Sbjct: 683  PGYQFDQLLVLAIEGESLILSAKQSLIKLAHMLPSDSSHVNPYSIIHGFICNIIEAGCFV 742

Query: 2388 RFLGRVTAFSPKHKAADDQIADTSEAFYIGQSVRGEVLNVDSETGRITLSLKQSSCFSTD 2567
            RFLGR+T FSP++KA  DQ     E +YIGQSVR  V++V  ETGRITLSLKQS+CFSTD
Sbjct: 743  RFLGRLTGFSPRNKAMQDQKLYLRETYYIGQSVRSNVVDVSGETGRITLSLKQSTCFSTD 802

Query: 2568 ASFIQAYFLWEEKIAKLQLSDSEKSDYKWLESLSVGNVVEGKVHEAKEFGVVLSFKEHND 2747
            ASFIQ +F  EEKIAKLQ  D    +  W E  ++G+VVEG+V E K+ GV +SF++++D
Sbjct: 803  ASFIQEFFSTEEKIAKLQSLD----ESNWAEEFAIGSVVEGEVQEVKDIGVTISFEKYHD 858

Query: 2748 VFGFISHYQLGGTTLETGSIVQAVVLDIAKGERLVDLSLKPDLVSRFKDQLKYPTQKKSQ 2927
            VFGFI+ + L G+ +ETGS +QA VLD++K ERLVDLSLKP+LV ++       T +K  
Sbjct: 859  VFGFIALHGLSGSIVETGSTIQAAVLDVSKTERLVDLSLKPELVDKWGGSSSRQTNRK-- 916

Query: 2928 KRKKDLSLNLEVHQTVNAIVEIVKENYLVLSLPGCSHAIGYASIADYNTQKLPHRHFVNG 3107
            KRK +   +LE++QTV+ +VE VKENYLVLSLP   HAIGYAS  DYNTQ+L  +HF  G
Sbjct: 917  KRKAEAPKDLEMNQTVHTVVEAVKENYLVLSLPEFGHAIGYASTYDYNTQRLHQKHFTVG 976

Query: 3108 QSVVATVGALPAPSTTGRXXXXXXXXXXXXXXXXXXXXXXXXXYNVGSFVEAEITEIKPL 3287
            QSVVATV ALP PST GR                           VGS V AEI +++PL
Sbjct: 977  QSVVATVVALPCPSTFGRLLLLLKSISEAIVTPGSKRSRKNSSCEVGSLVHAEIIDVQPL 1036

Query: 3288 EMRLKFGFGFRGRVHITE------ANDDQTVEDPLTKFKVGQTLTARVVEKVNQSETNRK 3449
            EMRLKFG G RGR+H+TE         D+  E P + F+VGQT+ AR+V + N S +  K
Sbjct: 1037 EMRLKFGVGLRGRIHVTEFCAQVSNTPDEASEAPFSNFRVGQTVVARIVAEANHSASKGK 1096

Query: 3450 NYQWELSIKSAVLSESGDIEDGLSGE-CNFCPGKRVSGYVVAVDNEWAWLTISRCVKAQL 3626
             Y WELS+K  VL +   +   +  E   F  G+RV+ YV  V+ +WAWL ++R V AQL
Sbjct: 1097 GYLWELSVKPEVLKDFSAVGGEIVNEDLGFSIGQRVTAYVSNVNGDWAWLAVTRRVSAQL 1156

Query: 3627 FLLDSSCEPRDLQEFQKRFTIGKSITGHILSFNKEKRIIRLLLRPLSVVPNGIADNSGRI 3806
            F+LDSS EP +LQEF K F +GK+++G+I +   EK+I+RL+L  LS + +G +D     
Sbjct: 1157 FILDSSSEPSELQEFSKHFYVGKAVSGYISNIIGEKKILRLVLHHLSAISSGKSDEENSK 1216

Query: 3807 VS------VEKVGAHIVEGDVLGGRISKILSGVGGLLVQIGPHLYGKVHFTELTDKWVAN 3968
            +S       +KV  H+ EGD++GGRISKIL GVGGLLVQIGPHL+G+VH+TELTD  V +
Sbjct: 1217 ISNLPTDVCKKVICHLNEGDIVGGRISKILPGVGGLLVQIGPHLFGRVHYTELTDCLVPD 1276

Query: 3969 PLSDYEEGQFVKCKVLEISRSVTGNVHFDLSLRGFRDGTQILNSSGVQNDQEFPTTRYE- 4145
            PLS Y+EGQFVKCKV+EI+ +V G  H DLSLR         +S+G+   +    + +E 
Sbjct: 1277 PLSGYKEGQFVKCKVIEITHAVKGTTHIDLSLR---------SSAGILCQKNIECSNHEN 1327

Query: 4146 ------KIEKLQKNMIVQGFVKNVMSKGCFIMLSRKVDAKVLISNLSNGFVENPEKEFPV 4307
                  KIE +  +M VQG+VKN+  KGCFIMLSR ++AK+L+SNLS+G+++NPEKEFP 
Sbjct: 1328 IASGRVKIEDIHAHMEVQGYVKNISPKGCFIMLSRGLEAKILLSNLSDGYIDNPEKEFPT 1387

Query: 4308 GKLVQGKVLSVEPLSKRVEVTLKTESGVESSDTRRGDFSSLQVGAVVSGSIKRIESFGLF 4487
            GKLV+G++LSVEPLSKRVEVTLK+ +   +      D  S   G ++SG IKR+ESFGLF
Sbjct: 1388 GKLVRGRILSVEPLSKRVEVTLKSVTETGALRGSNNDLRSFSAGDIISGRIKRVESFGLF 1447

Query: 4488 ITLEHTNMVGLCHVSEVSDEQTEDIDSKYRVGERVVAKILKVDTERHRISLGMRESYL-- 4661
            I++++T++VGLCHVSEVSD+  E ++ +Y  G+ V AK+LKVD +RHRI+LGM+ SY+  
Sbjct: 1448 ISIDNTDVVGLCHVSEVSDDPVESLEFRYHAGDTVKAKVLKVDEKRHRIALGMKRSYIGE 1507

Query: 4662 -----TNDSDDHKLLDQYTVXXXXXXXXXXXXHMTTQTIDTSGADDVENGSANGIYPD-- 4820
                 TN  ++H+                     +T+  D    DD +N     I P+  
Sbjct: 1508 RSELCTNMEEEHEDAADGDNFIGETRLSMDPDSSSTKFKDMD--DDFDN-----IEPEQP 1560

Query: 4821 LAYVASRASIPPLEVTLDDMEGSDPGDFGGENQEHLNEASTTTXXXXXXXXXXXXXXXXX 5000
            L    SRA +P LEVTLDD++ +D      EN+E L   + +                  
Sbjct: 1561 LRLAESRALVPSLEVTLDDIDETDMVTLQSENKE-LTSGTDSKEKNDRREKKKAKEEREM 1619

Query: 5001 XXXXXXQRLLEKDIPRTADEFDKLVRSSPNSSFLWIKYMAFMLSLGEIENARAIAKRALA 5180
                  +RLL+ + P T DEF+KLVRSSPNSSF+WIKYM F  +  ++E AR+IA+RAL 
Sbjct: 1620 EVRAAEERLLQNNSPTTVDEFEKLVRSSPNSSFVWIKYMDFFKA--DVEKARSIAERALR 1677

Query: 5181 TISFREEAEKLNVWVAYFNLENEYGNPPEEAVAEVFKEALQYCDREKVHLALLGVYERTD 5360
            TI+ REE EKLNVW+AYFNLENEYGNP E+AV ++F+ ALQ  D +KVHLALLG+YERT+
Sbjct: 1678 TINIREENEKLNVWLAYFNLENEYGNPKEDAVTKIFQRALQCNDPKKVHLALLGMYERTN 1737

Query: 5361 QYKLADEHLDQMVKKYKKSCEVWLRRIKSHLKQGKDGIDAIVKDALHKLDKHEHIKFKSQ 5540
            Q  LADE LD+M+K++K SC+VWLRR++S  K+ +  I +IV  AL  L K +HIK+ SQ
Sbjct: 1738 QDNLADELLDKMIKRFKHSCKVWLRRMESLFKKKQVEIQSIVNRALLCLPKRKHIKYISQ 1797

Query: 5541 TAILAFKCGVPDTGRSLFELLLRENPNRTDLWNVYLDQEIRLGDEEVIRALFERATXXXX 5720
            TAIL FKCGV D GRS+FE +LRE P RTDLW++YLDQEIRLGD+++IRALFERA     
Sbjct: 1798 TAILEFKCGVADRGRSMFEGILREYPKRTDLWSIYLDQEIRLGDKDMIRALFERAISLSL 1857

Query: 5721 XXXXXXXXXXXYLEFEKGHGDEDRVEYVKRKAIECVENSLA 5843
                       YLE+EK  GDE+R+E VK+KA+E VEN+LA
Sbjct: 1858 APKKMKFLFKKYLEYEKSVGDEERIESVKQKALEYVENTLA 1898


>ref|NP_187803.4| RNA binding protein [Arabidopsis thaliana]
            gi|332641610|gb|AEE75131.1| RNA binding protein
            [Arabidopsis thaliana]
          Length = 1896

 Score = 1909 bits (4946), Expect = 0.0
 Identities = 1017/1939 (52%), Positives = 1314/1939 (67%), Gaps = 12/1939 (0%)
 Frame = +3

Query: 63   AKPQQNKQPMKTKPNKNPSLKPQXXXXXXRKQSNDSSSLKPMQIEDDVPDFPRGGGSLLS 242
            A  ++N      KP K P  K +             S    +Q+ED VPDFPRGGG+ LS
Sbjct: 9    ANGKRNDSTKSFKPMKKPFKKTKDDVAAR-------SEAMALQLED-VPDFPRGGGTSLS 60

Query: 243  RKXXXXXXXXXXXXXXKEQFIGLSXXXXXXXXXXXSYLEEDDFGSLFGEGVTGKLPKYAN 422
            +K               ++ +              S L  DD G LFG G+ GK P+YAN
Sbjct: 61   KKEREKLYEEVDAEFDADERVSKKSKGGKSKKRIPSDL--DDLGLLFGGGLHGKRPRYAN 118

Query: 423  KITLKNVSAGMKLWGVISEVNEKDLVVNLPGGLRGLIRASEASDLIAENEIKDTEHNFLS 602
            KIT KN+S GMKL GV++EVN+KD+V++LPGGLRGL+RASE SD   +  I+D E+  L 
Sbjct: 119  KITTKNISPGMKLLGVVTEVNQKDIVISLPGGLRGLVRASEVSDF-TDRGIEDDENELLG 177

Query: 603  SIFXXXXXXXXXXXXXXXXKSDTKGKMKIWLSLRLGLLKKSFTLHAVQEGMVLTAYVKSI 782
             IF                K +  GK KIWLSLRL LL K F+  + Q GMV +A VKSI
Sbjct: 178  DIFSVGQLVPCIVLELDDDKKEA-GKRKIWLSLRLSLLHKGFSFDSFQLGMVFSANVKSI 236

Query: 783  EDHGYILQFGLSSFSGFLPRRNKDGCEMKVNAGQLLQGVVRNIDNARRVVHMSSDPDIVS 962
            EDHG IL FGL S +GF+   +    E  +  GQL+QGVV  ID  R++VH+SSDPD V+
Sbjct: 237  EDHGSILHFGLPSITGFIEISDDGNQESGMKTGQLIQGVVTKIDRDRKIVHLSSDPDSVA 296

Query: 963  KCVTKDVKGISIDLLVPGMMVNARVQSTLENGIMLSFLSYFTGTVDIFHLENTCPSTAWK 1142
            KC+TKD+ G+S DLL+PGMMVNARVQS LENGI+  FL+YF GTVD+FHL+N   + +WK
Sbjct: 297  KCLTKDLSGMSFDLLIPGMMVNARVQSVLENGILFDFLTYFNGTVDLFHLKNPLSNKSWK 356

Query: 1143 EEYNQHKKVNARILFIDPSTRAVGLTMNPHLVHNKAPPSHVQIGEIYDRSRIVRVDRGMG 1322
            +EYNQ+K VNARILFIDPS+RAVGLT++PH+V NKAPP HV  G+I+D +++VR+D+  G
Sbjct: 357  DEYNQNKTVNARILFIDPSSRAVGLTLSPHVVCNKAPPLHVFSGDIFDEAKVVRIDKS-G 415

Query: 1323 LLLDIPSAPVSTPGYVSIFDVSDXXXXXXXXXXXXGNHVRVRIVGFRHLEGQAMGIMKAS 1502
            LLL++PS P  TP YVS  +               GNH+RVR++G + +EG A+G +K S
Sbjct: 416  LLLELPSKPTPTPAYVSFKE---------------GNHIRVRVLGLKQMEGLAVGTLKES 460

Query: 1503 AFEGSVFTHSDVKPGMVVKGKVISVENFGAFVQFYSGVKALCPLPHMSELDIVKPRKKFK 1682
            AFEG VFTHSDVKPGMV K KVISV+ FGA VQF  G+KA+CPL HMSE ++ KPRKKFK
Sbjct: 461  AFEGPVFTHSDVKPGMVTKAKVISVDTFGAIVQFSGGLKAMCPLRHMSEFEVTKPRKKFK 520

Query: 1683 VGAELVFRVLGCKSKRITVTHXXXXXXXXXXXXXXYADAAEGLVTHGWITKIEKHGCFVR 1862
            VGAELVFRVLGCKSKRITVT+              Y DA EGLVTHGWITKIEKHGCFVR
Sbjct: 521  VGAELVFRVLGCKSKRITVTYKKTLVKSKLPILSSYTDATEGLVTHGWITKIEKHGCFVR 580

Query: 1863 FYNGVQGFASRTEVGLEPGVEPSSMYHVGQVVKCRVVSAIPDSRRINLSFNISPARGAVE 2042
            FYNGVQGF  R E+GLEPG +P S++HVG+VVKCRV SA+  ++RI L+           
Sbjct: 581  FYNGVQGFVPRFELGLEPGSDPDSVFHVGEVVKCRVTSAVHGTQRITLN----------- 629

Query: 2043 DIIKLGAVVSAIVERMTPKAVIVKVNANGYIKGTILNEHLADQQGQATLMRSLLKPGYEF 2222
            D IKLG++VS I++ +T +AVIV+V +   +KGTI  EHLAD   QA L+ SLL+PGYE 
Sbjct: 630  DSIKLGSIVSGIIDTITSQAVIVRVKSKSVVKGTISAEHLADHHEQAKLIMSLLRPGYEL 689

Query: 2223 DQLLVLDFEGNSVVLSAKHSLINSAKQLPVDVAQFHPHLLTHGYICNVIDSGCFVRFLGR 2402
            D+LLVLD EGN++ LS+K+SLI  A++LP D  Q  P+ + HGY+CN+I++GCFVRFLGR
Sbjct: 690  DKLLVLDIEGNNMALSSKYSLIKLAEELPSDFNQLQPNSVVHGYVCNLIENGCFVRFLGR 749

Query: 2403 VTAFSPKHKAADDQIADTSEAFYIGQSVRGEVLNVDSETGRITLSLKQSSCFSTDASFIQ 2582
            +T F+P+ KA DD  AD SE+F++GQSVR  +++V+ E  RITLSLKQSSC S DASF+Q
Sbjct: 750  LTGFAPRSKAIDDPKADVSESFFVGQSVRANIVDVNQEKSRITLSLKQSSCASVDASFVQ 809

Query: 2583 AYFLWEEKIAKLQLSDSEKSDYKWLESLSVGNVVEGKVHEAKEFGVVLSFKEHNDVFGFI 2762
             YFL +EKI+ LQ SD  KSD  W+E  S+G++++G + E  + GVV++F   N+V GFI
Sbjct: 810  EYFLMDEKISDLQSSDITKSDCSWVEKFSIGSLIKGTIQEQNDLGVVVNFDNINNVLGFI 869

Query: 2763 SHYQLGGTTLETGSIVQAVVLDIAKGERLVDLSLKPDLVSRFKDQLKYPTQKKSQKRKKD 2942
              + +GG TL  GS+V AVVLDI++ ERLVDLSL+P+L++    ++   ++KK   RK+ 
Sbjct: 870  PQHHMGGATLVPGSVVNAVVLDISRAERLVDLSLRPELLNNLTKEVSNSSKKK---RKRG 926

Query: 2943 LSLNLEVHQTVNAIVEIVKENYLVLSLPGCSHAIGYASIADYNTQKLPHRHFVNGQSVVA 3122
            +S  LEVHQ V+A+VEIVKE +LVLS+P   + IGYAS++DYNTQKLP + F  GQSVVA
Sbjct: 927  ISKELEVHQRVSAVVEIVKEQHLVLSIPEHGYTIGYASVSDYNTQKLPVKQFSTGQSVVA 986

Query: 3123 TVGALPAPSTTGRXXXXXXXXXXXXXXXXXXXXXXXXXYNVGSFVEAEITEIKPLEMRLK 3302
            +V A+  P T+GR                           VGS V AEITEIKP E+R+ 
Sbjct: 987  SVKAVQNPLTSGRLLLLLDSVSGTSETSRSKRAKKKSSCEVGSVVHAEITEIKPFELRVN 1046

Query: 3303 FGFGFRGRVHITEA--NDDQTVEDPLTKFKVGQTLTARVVEKVNQSETNRKNYQWELSIK 3476
            FG  FRGR+HITE   ND  T ++P  KF+VGQ+++ARVV K   ++  +K   WELS+K
Sbjct: 1047 FGNSFRGRIHITEVLVNDASTSDEPFAKFRVGQSISARVVAKPCHTDI-KKTQLWELSVK 1105

Query: 3477 SAVLSESGDIEDGLSGE-CNFCPGKRVSGYVVAVDNEWAWLTISRCVKAQLFLLDSSCEP 3653
             A+L +S +  D    E   F  G+ V GYV  VD EW WL +SR V A++F+LD+SC+ 
Sbjct: 1106 PAMLKDSSEFNDTQESEQLEFAAGQCVIGYVYKVDKEWVWLAVSRNVTARIFILDTSCKA 1165

Query: 3654 RDLQEFQKRFTIGKSITGHILSFNKEKRIIRLLLRPLSVVPNGIADNSGR-------IVS 3812
             +L+EF++RF IGK+++G++L++NKEK+ +RL+ RPL  +   IA+  G         + 
Sbjct: 1166 HELEEFERRFPIGKAVSGYVLTYNKEKKTLRLVQRPLLFIHKSIANGGGSKTDKPDSSIP 1225

Query: 3813 VEKVGAHIVEGDVLGGRISKILSGVGGLLVQIGPHLYGKVHFTELTDKWVANPLSDYEEG 3992
             +     I EGD+LGGRISKIL GVGGL VQ+GP+++G+VHFTE+ D WV +PL  + EG
Sbjct: 1226 GDDDTLFIHEGDILGGRISKILPGVGGLRVQLGPYVFGRVHFTEINDSWVPDPLDGFREG 1285

Query: 3993 QFVKCKVLEISRSVTGNVHFDLSLRGFRDGTQILN--SSGVQNDQEFPTTRYEKIEKLQK 4166
            QFVKCKVLEIS S  G    +LSLR   DG    +  S  ++N+      R+E+IE L  
Sbjct: 1286 QFVKCKVLEISSSSKGTWQIELSLRTSLDGMSSADHLSEDLKNNDNV-CKRFERIEDLSP 1344

Query: 4167 NMIVQGFVKNVMSKGCFIMLSRKVDAKVLISNLSNGFVENPEKEFPVGKLVQGKVLSVEP 4346
            +M VQG+VKN MSKGCFI+LSR V+AKV +SNL + FV+ PEKEFPVGKLV G+VL+VEP
Sbjct: 1345 DMGVQGYVKNTMSKGCFIILSRTVEAKVRLSNLCDTFVKEPEKEFPVGKLVTGRVLNVEP 1404

Query: 4347 LSKRVEVTLKTESGVESSDTRRGDFSSLQVGAVVSGSIKRIESFGLFITLEHTNMVGLCH 4526
            LSKR+EVTLKT +      +   D   L VG ++SG I+R+E FGLFI ++ T MVGLCH
Sbjct: 1405 LSKRIEVTLKTVNAGGRPKSESYDLKKLHVGDMISGRIRRVEPFGLFIDIDQTGMVGLCH 1464

Query: 4527 VSEVSDEQTEDIDSKYRVGERVVAKILKVDTERHRISLGMRESYLTNDSDDHKLLDQYTV 4706
            +S++SD++ E++ ++Y+ GE V AKILK+D E+ RISLGM+ SYL N  DD         
Sbjct: 1465 ISQLSDDRMENVQARYKAGESVRAKILKLDEEKKRISLGMKSSYLMNGDDDKAQPLSEDN 1524

Query: 4707 XXXXXXXXXXXXHMTTQTIDTSGADDVENGSANGIYPDLAYVASRASIPPLEVTLDDMEG 4886
                              +D  G  +   G++      LA V SRASIPPLEV LDD+E 
Sbjct: 1525 TSMECDPINDPKSEVLAAVDDFGFQETSGGTSLV----LAQVESRASIPPLEVDLDDIEE 1580

Query: 4887 SDPGDFGGENQEHLNEASTTTXXXXXXXXXXXXXXXXXXXXXXXQRLLEKDIPRTADEFD 5066
            +D      +NQE L  A+                           RLLE   P  ADEF+
Sbjct: 1581 TDFDS--SQNQEKLLGANKDEKSKRREKQKDKEEREKKIQAAEG-RLLEHHAPENADEFE 1637

Query: 5067 KLVRSSPNSSFLWIKYMAFMLSLGEIENARAIAKRALATISFREEAEKLNVWVAYFNLEN 5246
            KLVRSSPNSSF+WIKYMAFMLSL +IE AR+IA+RAL TI+ REE EKLN+WVAYFNLEN
Sbjct: 1638 KLVRSSPNSSFVWIKYMAFMLSLADIEKARSIAERALRTINIREEEEKLNIWVAYFNLEN 1697

Query: 5247 EYGNPPEEAVAEVFKEALQYCDREKVHLALLGVYERTDQYKLADEHLDQMVKKYKKSCEV 5426
            E+GNPPEE+V +VF+ A QYCD +KV+LALLGVYERT+QYKLAD+ LD+M+KK+K+SC++
Sbjct: 1698 EHGNPPEESVKKVFERARQYCDPKKVYLALLGVYERTEQYKLADKLLDEMIKKFKQSCKI 1757

Query: 5427 WLRRIKSHLKQGKDGIDAIVKDALHKLDKHEHIKFKSQTAILAFKCGVPDTGRSLFELLL 5606
            WLR+I+S LKQ ++ I ++V  AL  L +H+HIKF SQTAIL FKCGV D GRSLFE +L
Sbjct: 1758 WLRKIQSSLKQNEEAIQSVVNRALLCLPRHKHIKFISQTAILEFKCGVADRGRSLFEGVL 1817

Query: 5607 RENPNRTDLWNVYLDQEIRLGDEEVIRALFERATXXXXXXXXXXXXXXXYLEFEKGHGDE 5786
            RE P RTDLW+VYLDQEIRLG+++VIR+LFERA                +LE+EK  GDE
Sbjct: 1818 REYPKRTDLWSVYLDQEIRLGEDDVIRSLFERAISLSLPPKKMKFLFKKFLEYEKSVGDE 1877

Query: 5787 DRVEYVKRKAIECVENSLA 5843
            +RVEYVK++A+E   ++LA
Sbjct: 1878 ERVEYVKQRAMEYANSTLA 1896