BLASTX nr result

ID: Coptis21_contig00005562 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00005562
         (1113 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003637202.1| hypothetical protein MTR_077s0013 [Medicago ...    63   2e-07
ref|XP_003616602.1| hypothetical protein MTR_5g082250 [Medicago ...    58   5e-06

>ref|XP_003637202.1| hypothetical protein MTR_077s0013 [Medicago truncatula]
           gi|355503137|gb|AES84340.1| hypothetical protein
           MTR_077s0013 [Medicago truncatula]
          Length = 586

 Score = 62.8 bits (151), Expect = 2e-07
 Identities = 31/57 (54%), Positives = 40/57 (70%), Gaps = 2/57 (3%)
 Frame = -1

Query: 954 MARRGRPRKIGQARMDAAIDALRPMGYDIPLIRRKVNELLEIYQGH--WEIIEQGPY 790
           MA R RP K G +RMDAA+DA+ P+G+D  LI + VN+LL+IY G+  W  IE G Y
Sbjct: 1   MAPRRRPLKKGDSRMDAALDAMTPLGFDKKLIHQTVNKLLKIYDGNEGWHFIEDGAY 57


>ref|XP_003616602.1| hypothetical protein MTR_5g082250 [Medicago truncatula]
           gi|355517937|gb|AES99560.1| hypothetical protein
           MTR_5g082250 [Medicago truncatula]
          Length = 225

 Score = 57.8 bits (138), Expect = 5e-06
 Identities = 26/58 (44%), Positives = 40/58 (68%), Gaps = 2/58 (3%)
 Frame = -1

Query: 957 PMARRGRPRKIGQARMDAAIDALRPMGYDIPLIRRKVNELLEIYQGH--WEIIEQGPY 790
           P  R+ R + +G  RMDAA+DA+R +G++  +IR  V ELL++Y+G+  W  IE+G Y
Sbjct: 3   PRRRQPRRQTVGNTRMDAALDAMRQLGFEEKIIRDTVEELLDVYEGNQGWPFIEEGSY 60


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