BLASTX nr result

ID: Coptis21_contig00005557 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00005557
         (2676 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ADZ72841.1| AGAMOUS-like 24-like protein 2 [Aquilegia formosa]     200   2e-48
gb|ABD66219.2| JOINTLESS [Malus x domestica] gi|302398887|gb|ADL...   179   3e-42
gb|ADZ72840.1| AGAMOUS-like E 24-like protein 1 [Aquilegia formosa]   177   1e-41
dbj|BAB70736.1| putative MADS-domain transcription factor MpMADS...   171   7e-40
ref|XP_002269295.1| PREDICTED: MADS-box protein SVP [Vitis vinif...   170   2e-39

>gb|ADZ72841.1| AGAMOUS-like 24-like protein 2 [Aquilegia formosa]
          Length = 211

 Score =  200 bits (508), Expect = 2e-48
 Identities = 113/165 (68%), Positives = 124/165 (75%), Gaps = 5/165 (3%)
 Frame = -1

Query: 828 SMKEIIERHNLHSKNLQKLDQPSLELQLENSNYARLSKEIGEKSHQLRQMRXXXXXXXXX 649
           SM EI+ER +LHSKNLQKLDQPSLELQLEN+NYARLSKEI EKSHQLRQMR         
Sbjct: 47  SMGEILERQSLHSKNLQKLDQPSLELQLENNNYARLSKEIAEKSHQLRQMRGEELRELNI 106

Query: 648 XXXXXXXXXXETGLGRVLETKSEKIMKEIGTLHSKGKLLMEENDRLRQRVEEMSKGQTQV 469
                     ETGL RVLETKS+KIMKEI TLH+KG LLMEEN+RLR++V +MS  Q  V
Sbjct: 107 EELQQLEKSLETGLSRVLETKSDKIMKEISTLHTKGMLLMEENERLRKQVVDMSSEQGNV 166

Query: 468 TGD-SEIVVFEEGQSSDSVTN----NGSPPDNDSSDTSLKLGLSL 349
            GD    VVFEEGQSS+SVTN     G PPDNDSSDTSL+LGLSL
Sbjct: 167 PGDLKNNVVFEEGQSSESVTNISNPGGPPPDNDSSDTSLRLGLSL 211


>gb|ABD66219.2| JOINTLESS [Malus x domestica] gi|302398887|gb|ADL36738.1| MADS
           domain class transcription factor [Malus x domestica]
          Length = 224

 Score =  179 bits (455), Expect = 3e-42
 Identities = 104/162 (64%), Positives = 114/162 (70%), Gaps = 5/162 (3%)
 Frame = -1

Query: 828 SMKEIIERHNLHSKNLQKLDQPSLELQL-ENSNYARLSKEIGEKSHQLRQMRXXXXXXXX 652
           SMKEI+ERHNLHSKNL+KL+QPSL+LQL ENSNY RLSKEI  KSHQLRQMR        
Sbjct: 61  SMKEILERHNLHSKNLEKLEQPSLQLQLVENSNYTRLSKEIAAKSHQLRQMRGEEIQGLN 120

Query: 651 XXXXXXXXXXXETGLGRVLETKSEKIMKEIGTLHSKGKLLMEENDRLRQRVEEMSKGQTQ 472
                      ETGLGRV+E KSEKIMKEIG L   G  LMEEN+RLRQ+V E S G+  
Sbjct: 121 LEELQQLEKSLETGLGRVIEKKSEKIMKEIGDLQRNGMQLMEENERLRQQVAEKSDGRRL 180

Query: 471 VTGDSEIVVFEEGQSSDSVTN----NGSPPDNDSSDTSLKLG 358
           V  DSE +  EEGQSS+SVTN    N  P D DSSDTSLKLG
Sbjct: 181 VQVDSENMFTEEGQSSESVTNPCNSNNGPQDYDSSDTSLKLG 222


>gb|ADZ72840.1| AGAMOUS-like E 24-like protein 1 [Aquilegia formosa]
          Length = 193

 Score =  177 bits (450), Expect = 1e-41
 Identities = 99/164 (60%), Positives = 115/164 (70%), Gaps = 4/164 (2%)
 Frame = -1

Query: 828 SMKEIIERHNLHSKNLQKLDQPSLELQLENSNYARLSKEIGEKSHQLRQMRXXXXXXXXX 649
           SMKEI+ERHNLHSKNL KLDQPSLELQLEN NYARLSKE+ E+S QLR MR         
Sbjct: 30  SMKEILERHNLHSKNLHKLDQPSLELQLENGNYARLSKEVAERSRQLRNMRGEELQGLNI 89

Query: 648 XXXXXXXXXXETGLGRVLETKSEKIMKEIGTLHSKGKLLMEENDRLRQRVEEMSKGQTQV 469
                     ETGL RVLETKS+ IM EI TL +KG  LMEEN+RL+Q++ E+SK Q  +
Sbjct: 90  EELQQLEKSLETGLSRVLETKSDWIMNEISTLQAKGAKLMEENERLKQKMVEISKVQKNM 149

Query: 468 TGDSEIVVFEEGQSSDSVTN----NGSPPDNDSSDTSLKLGLSL 349
             DS++VV EEG SS+SVTN     G P D DSSDTSL+L L +
Sbjct: 150 AIDSDVVVHEEGHSSESVTNICSSGGPPQDYDSSDTSLELRLKM 193


>dbj|BAB70736.1| putative MADS-domain transcription factor MpMADS1 [Magnolia
           praecocissima]
          Length = 229

 Score =  171 bits (434), Expect = 7e-40
 Identities = 103/167 (61%), Positives = 119/167 (71%), Gaps = 9/167 (5%)
 Frame = -1

Query: 828 SMKEIIERHNLHSKNLQKLDQ-PSLELQLENSNYARLSKEIGEKSHQLRQMRXXXXXXXX 652
           SMKEIIERH +HSKNLQKLDQ PSLELQLENSNY RLSK++ EKSH +RQMR        
Sbjct: 61  SMKEIIERHTMHSKNLQKLDQQPSLELQLENSNYNRLSKQVAEKSHLIRQMRGEDIQGLT 120

Query: 651 XXXXXXXXXXXETGLGRVLETKSEKIMKEIGTLHSKGKLLMEENDRLRQRVEEMSKGQTQ 472
                      ETGL RV+E K+E+IMKEI  L  KG  LMEEN RLRQR+ EMS+G ++
Sbjct: 121 VEELQKLEKTLETGLSRVMERKAEQIMKEISGLQIKGVKLMEENMRLRQRIIEMSRGDSK 180

Query: 471 VTGD-----SEIVVFEEGQSSDSVT---NNGSPPDNDSSDTSLKLGL 355
             GD     SEIVV E+GQSSDSVT   N+G+P D +SSDTSLKLG+
Sbjct: 181 --GDRQIIESEIVVNEDGQSSDSVTNACNSGAPQDYESSDTSLKLGV 225


>ref|XP_002269295.1| PREDICTED: MADS-box protein SVP [Vitis vinifera]
           gi|297744859|emb|CBI38273.3| unnamed protein product
           [Vitis vinifera]
          Length = 227

 Score =  170 bits (430), Expect = 2e-39
 Identities = 96/163 (58%), Positives = 117/163 (71%), Gaps = 5/163 (3%)
 Frame = -1

Query: 828 SMKEIIERHNLHSKNLQKLDQPSLELQL-ENSNYARLSKEIGEKSHQLRQMRXXXXXXXX 652
           SMKEI+E+H+L SKNL+KL+QPSLELQL EN+N++RLSKE+ +KSH+LRQMR        
Sbjct: 61  SMKEILEKHSLQSKNLEKLEQPSLELQLVENNNHSRLSKEVADKSHKLRQMRGEELQGLN 120

Query: 651 XXXXXXXXXXXETGLGRVLETKSEKIMKEIGTLHSKGKLLMEENDRLRQRVEEMSKGQTQ 472
                      E GL RV++ K E+IMKEI  L SKG  LMEEN+RLRQ+V E+S  + Q
Sbjct: 121 IEDLQQLEKSLEAGLSRVIQKKGERIMKEITDLQSKGVQLMEENERLRQQVVEISNRRRQ 180

Query: 471 VTGDSEIVVFEEGQSSDSVTN----NGSPPDNDSSDTSLKLGL 355
           V GDSE +  EEGQSS+SVTN    NG P D +SSDTSLKLGL
Sbjct: 181 VAGDSENMFHEEGQSSESVTNVSNSNGPPQDYESSDTSLKLGL 223


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