BLASTX nr result

ID: Coptis21_contig00005550 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00005550
         (1058 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003556413.1| PREDICTED: eukaryotic translation initiation...   451   e-124
ref|XP_003548269.1| PREDICTED: eukaryotic translation initiation...   450   e-124
ref|XP_003534062.1| PREDICTED: eukaryotic translation initiation...   449   e-124
gb|ACF82578.1| unknown [Zea mays] gi|195621310|gb|ACG32485.1| eu...   449   e-124
ref|XP_002444482.1| hypothetical protein SORBIDRAFT_07g022630 [S...   448   e-124

>ref|XP_003556413.1| PREDICTED: eukaryotic translation initiation factor 6-2-like
           [Glycine max]
          Length = 245

 Score =  451 bits (1161), Expect = e-124
 Identities = 222/245 (90%), Positives = 233/245 (95%)
 Frame = -1

Query: 959 MATRLQFENNCDIGVFSKLTNAYCLVAIGGSENFYSTFESDLAEFIPVVKTSIAGTRIVG 780
           MATRLQFENNC++GVFSKLTNAYCLVAIGGSENFYS FE++LA+ IPVVKTSI GTRIVG
Sbjct: 1   MATRLQFENNCEVGVFSKLTNAYCLVAIGGSENFYSAFEAELADVIPVVKTSIGGTRIVG 60

Query: 779 RLCVGNKNGLLLPHNTTDQELQHLRNSLPEEVAVQRIEERLSALGNCIACNDHVALTHTD 600
           RLCVGNKNGLLLPH  TDQELQHLRNSLP++V VQRIEERLSALGNCIACNDHVALTHTD
Sbjct: 61  RLCVGNKNGLLLPHTITDQELQHLRNSLPDQVVVQRIEERLSALGNCIACNDHVALTHTD 120

Query: 599 LDRETEEFIADTLGVEVFRQTIAGNILVGSYCAFSNKGGLVHPHTSIEDLDELSTLLQVP 420
           LD+ETEE IAD LGVEVFRQT+AGNILVGSYC FSN+GGLVHPHTSIEDLDELSTLLQVP
Sbjct: 121 LDKETEEMIADVLGVEVFRQTVAGNILVGSYCVFSNRGGLVHPHTSIEDLDELSTLLQVP 180

Query: 419 LVAGTVNRGSEVIGAGMVVNDWTAFCGSDTTATELSVIESVFKLREGQPNAIVDEMRKSL 240
           LVAGTVNRGSEVI AGM VNDWTAFCGSDTTATELSVIESVFKLRE QP+AIVDEMRKSL
Sbjct: 181 LVAGTVNRGSEVIAAGMTVNDWTAFCGSDTTATELSVIESVFKLREAQPSAIVDEMRKSL 240

Query: 239 IDTYV 225
           IDTYV
Sbjct: 241 IDTYV 245


>ref|XP_003548269.1| PREDICTED: eukaryotic translation initiation factor 6-2-like
           isoform 1 [Glycine max] gi|356559973|ref|XP_003548270.1|
           PREDICTED: eukaryotic translation initiation factor
           6-2-like isoform 2 [Glycine max]
          Length = 245

 Score =  450 bits (1158), Expect = e-124
 Identities = 222/245 (90%), Positives = 233/245 (95%)
 Frame = -1

Query: 959 MATRLQFENNCDIGVFSKLTNAYCLVAIGGSENFYSTFESDLAEFIPVVKTSIAGTRIVG 780
           MATRLQFENNC++GVFSKLTNAYCLVAIGGSE+FYS FE++LA  IPVVKTSI GTRI+G
Sbjct: 1   MATRLQFENNCEVGVFSKLTNAYCLVAIGGSESFYSVFEAELAGVIPVVKTSIGGTRIIG 60

Query: 779 RLCVGNKNGLLLPHNTTDQELQHLRNSLPEEVAVQRIEERLSALGNCIACNDHVALTHTD 600
           RLC GNKNGLLLPH TTDQELQHLRNSLP++V VQRI+ERLSALGNCIACNDHVALTHTD
Sbjct: 61  RLCAGNKNGLLLPHTTTDQELQHLRNSLPDQVVVQRIDERLSALGNCIACNDHVALTHTD 120

Query: 599 LDRETEEFIADTLGVEVFRQTIAGNILVGSYCAFSNKGGLVHPHTSIEDLDELSTLLQVP 420
           LDRETEE IAD LGVEVFRQTIAGNILVGSYCAFSN+GGLVHPHTSIEDLDELSTLLQVP
Sbjct: 121 LDRETEEMIADVLGVEVFRQTIAGNILVGSYCAFSNRGGLVHPHTSIEDLDELSTLLQVP 180

Query: 419 LVAGTVNRGSEVIGAGMVVNDWTAFCGSDTTATELSVIESVFKLREGQPNAIVDEMRKSL 240
           LVAGTVNRGSEVI AGM VNDWTAFCGSDTTATELSVIESVFKLRE QP+AIVDEMRKSL
Sbjct: 181 LVAGTVNRGSEVIAAGMTVNDWTAFCGSDTTATELSVIESVFKLREAQPSAIVDEMRKSL 240

Query: 239 IDTYV 225
           IDTYV
Sbjct: 241 IDTYV 245


>ref|XP_003534062.1| PREDICTED: eukaryotic translation initiation factor 6-2-like
           isoform 1 [Glycine max] gi|356530993|ref|XP_003534063.1|
           PREDICTED: eukaryotic translation initiation factor
           6-2-like isoform 2 [Glycine max]
          Length = 245

 Score =  449 bits (1154), Expect = e-124
 Identities = 221/245 (90%), Positives = 233/245 (95%)
 Frame = -1

Query: 959 MATRLQFENNCDIGVFSKLTNAYCLVAIGGSENFYSTFESDLAEFIPVVKTSIAGTRIVG 780
           MATRLQFENNC++GVFSKLTNAYCLVAIGGSE+FYS FE++LA+ IPVVKTSI GTRI+G
Sbjct: 1   MATRLQFENNCEVGVFSKLTNAYCLVAIGGSESFYSVFEAELADVIPVVKTSIGGTRIIG 60

Query: 779 RLCVGNKNGLLLPHNTTDQELQHLRNSLPEEVAVQRIEERLSALGNCIACNDHVALTHTD 600
           RLC GNKNGLLLPH TTDQELQ LRNSLP++V VQRI+ERLSALGNCIACNDHVALTHTD
Sbjct: 61  RLCAGNKNGLLLPHTTTDQELQQLRNSLPDQVVVQRIDERLSALGNCIACNDHVALTHTD 120

Query: 599 LDRETEEFIADTLGVEVFRQTIAGNILVGSYCAFSNKGGLVHPHTSIEDLDELSTLLQVP 420
           LDRETEE IAD LGVEVFRQTIAGNILVGSYCAFSN+GGLVHPHTSIEDLDELSTLLQVP
Sbjct: 121 LDRETEEMIADVLGVEVFRQTIAGNILVGSYCAFSNRGGLVHPHTSIEDLDELSTLLQVP 180

Query: 419 LVAGTVNRGSEVIGAGMVVNDWTAFCGSDTTATELSVIESVFKLREGQPNAIVDEMRKSL 240
           LVAGTVNRGSEVI AGM VNDWTAFCGSDTTATELSVIESVFKLRE QP+AIVDEMRKSL
Sbjct: 181 LVAGTVNRGSEVIAAGMTVNDWTAFCGSDTTATELSVIESVFKLREAQPSAIVDEMRKSL 240

Query: 239 IDTYV 225
           IDTYV
Sbjct: 241 IDTYV 245


>gb|ACF82578.1| unknown [Zea mays] gi|195621310|gb|ACG32485.1| eukaryotic
           translation initiation factor 6 [Zea mays]
           gi|414869824|tpg|DAA48381.1| TPA: eukaryotic translation
           initiation factor 6 [Zea mays]
          Length = 245

 Score =  449 bits (1154), Expect = e-124
 Identities = 219/245 (89%), Positives = 234/245 (95%)
 Frame = -1

Query: 959 MATRLQFENNCDIGVFSKLTNAYCLVAIGGSENFYSTFESDLAEFIPVVKTSIAGTRIVG 780
           MATR+QFENNC+IGVFSKLTNAYCLVAIGGSENFYS FE++LA+ IPVVKTSI GTRI+G
Sbjct: 1   MATRIQFENNCEIGVFSKLTNAYCLVAIGGSENFYSAFEAELADAIPVVKTSIGGTRIIG 60

Query: 779 RLCVGNKNGLLLPHNTTDQELQHLRNSLPEEVAVQRIEERLSALGNCIACNDHVALTHTD 600
           RLCVGNKNGLLLPH TTDQELQHLRN LP++V VQRI+ERLSALGNCIACNDHVALTH D
Sbjct: 61  RLCVGNKNGLLLPHTTTDQELQHLRNCLPDQVVVQRIDERLSALGNCIACNDHVALTHPD 120

Query: 599 LDRETEEFIADTLGVEVFRQTIAGNILVGSYCAFSNKGGLVHPHTSIEDLDELSTLLQVP 420
           LD+ETEEFIAD LGVEVFRQTIAGNILVGSYCAFSN+GGLVHPHTS+EDLDELSTLLQVP
Sbjct: 121 LDKETEEFIADVLGVEVFRQTIAGNILVGSYCAFSNRGGLVHPHTSVEDLDELSTLLQVP 180

Query: 419 LVAGTVNRGSEVIGAGMVVNDWTAFCGSDTTATELSVIESVFKLREGQPNAIVDEMRKSL 240
           LVAGTVNRGSEVI AGM VNDWTAFCGSDTTATELSVIESVFKLREGQP AIV++MRKSL
Sbjct: 181 LVAGTVNRGSEVIAAGMTVNDWTAFCGSDTTATELSVIESVFKLREGQPTAIVEDMRKSL 240

Query: 239 IDTYV 225
           ID+YV
Sbjct: 241 IDSYV 245


>ref|XP_002444482.1| hypothetical protein SORBIDRAFT_07g022630 [Sorghum bicolor]
           gi|241940832|gb|EES13977.1| hypothetical protein
           SORBIDRAFT_07g022630 [Sorghum bicolor]
          Length = 245

 Score =  448 bits (1153), Expect = e-124
 Identities = 218/245 (88%), Positives = 234/245 (95%)
 Frame = -1

Query: 959 MATRLQFENNCDIGVFSKLTNAYCLVAIGGSENFYSTFESDLAEFIPVVKTSIAGTRIVG 780
           MATR+QFENNC++GVFSKLTNAYCLVAIGGSENFYS FE++LA+ IPVVKTSI GTRI+G
Sbjct: 1   MATRIQFENNCEVGVFSKLTNAYCLVAIGGSENFYSAFEAELADAIPVVKTSIGGTRIIG 60

Query: 779 RLCVGNKNGLLLPHNTTDQELQHLRNSLPEEVAVQRIEERLSALGNCIACNDHVALTHTD 600
           RLCVGNKNGLLLPH TTDQELQHLRN LP++V VQRI+ERLSALGNCIACNDHVALTH D
Sbjct: 61  RLCVGNKNGLLLPHTTTDQELQHLRNCLPDQVVVQRIDERLSALGNCIACNDHVALTHPD 120

Query: 599 LDRETEEFIADTLGVEVFRQTIAGNILVGSYCAFSNKGGLVHPHTSIEDLDELSTLLQVP 420
           LD+ETEEFIAD LGVEVFRQTIAGNILVGSYCAFSN+GGLVHPHTS+EDLDELSTLLQVP
Sbjct: 121 LDKETEEFIADVLGVEVFRQTIAGNILVGSYCAFSNRGGLVHPHTSVEDLDELSTLLQVP 180

Query: 419 LVAGTVNRGSEVIGAGMVVNDWTAFCGSDTTATELSVIESVFKLREGQPNAIVDEMRKSL 240
           LVAGTVNRGSEVI AGM VNDWTAFCGSDTTATELSVIESVFKLREGQP AIV++MRKSL
Sbjct: 181 LVAGTVNRGSEVIAAGMTVNDWTAFCGSDTTATELSVIESVFKLREGQPTAIVEDMRKSL 240

Query: 239 IDTYV 225
           ID+YV
Sbjct: 241 IDSYV 245


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