BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00005536
         (1631 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002277091.1| PREDICTED: frataxin, mitochondrial isoform 1...   232   2e-58
emb|CAN67530.1| hypothetical protein VITISV_004311 [Vitis vinifera]   232   2e-58
ref|XP_002531340.1| Frataxin, mitochondrial precursor, putative ...   231   3e-58
ref|XP_003554058.1| PREDICTED: frataxin, mitochondrial-like [Gly...   221   3e-55
ref|XP_002319394.1| predicted protein [Populus trichocarpa] gi|2...   221   3e-55

>ref|XP_002277091.1| PREDICTED: frataxin, mitochondrial isoform 1 [Vitis vinifera]
           gi|296081250|emb|CBI17994.3| unnamed protein product
           [Vitis vinifera]
          Length = 197

 Score =  232 bits (591), Expect = 2e-58
 Identities = 115/147 (78%), Positives = 133/147 (90%), Gaps = 1/147 (0%)
 Frame = -1

Query: 551 SFVSPTITSRVSFCSRPLNL-DEAEVPASIDYRSLLEEDEYHKLADSTIHDLQEKFEEYG 375
           SF+S  + SR SFCSR L+L D+++ PA+IDY SLL+EDE+HK+ADSTI DLQEKFEEYG
Sbjct: 54  SFLS--VASR-SFCSRTLDLEDDSQGPAAIDYSSLLQEDEFHKVADSTIQDLQEKFEEYG 110

Query: 374 DCSQVDGFDIDYGNQVLTLKLGNLGTFVLNKQTPNRQLWLSSPVSGPSRFDWDKSSQAWV 195
           DC Q+DGFDIDYGNQVLTLKLG LGT+VLNKQTPNRQ+WLSSPVSGPSRFDWD+S+QAWV
Sbjct: 111 DCVQIDGFDIDYGNQVLTLKLGTLGTYVLNKQTPNRQIWLSSPVSGPSRFDWDQSAQAWV 170

Query: 194 YRRTKANLLWLLESEVEQLCGEPISLS 114
           YRRTKANL  LLE+E+E+LCG PISLS
Sbjct: 171 YRRTKANLSKLLETELEKLCGTPISLS 197


>emb|CAN67530.1| hypothetical protein VITISV_004311 [Vitis vinifera]
          Length = 202

 Score =  232 bits (591), Expect = 2e-58
 Identities = 115/147 (78%), Positives = 133/147 (90%), Gaps = 1/147 (0%)
 Frame = -1

Query: 551 SFVSPTITSRVSFCSRPLNL-DEAEVPASIDYRSLLEEDEYHKLADSTIHDLQEKFEEYG 375
           SF+S  + SR SFCSR L+L D+++ PA+IDY SLL+EDE+HK+ADSTI DLQEKFEEYG
Sbjct: 59  SFLS--VASR-SFCSRTLDLEDDSQGPAAIDYSSLLQEDEFHKVADSTIQDLQEKFEEYG 115

Query: 374 DCSQVDGFDIDYGNQVLTLKLGNLGTFVLNKQTPNRQLWLSSPVSGPSRFDWDKSSQAWV 195
           DC Q+DGFDIDYGNQVLTLKLG LGT+VLNKQTPNRQ+WLSSPVSGPSRFDWD+S+QAWV
Sbjct: 116 DCVQIDGFDIDYGNQVLTLKLGTLGTYVLNKQTPNRQIWLSSPVSGPSRFDWDQSAQAWV 175

Query: 194 YRRTKANLLWLLESEVEQLCGEPISLS 114
           YRRTKANL  LLE+E+E+LCG PISLS
Sbjct: 176 YRRTKANLSKLLETELEKLCGTPISLS 202


>ref|XP_002531340.1| Frataxin, mitochondrial precursor, putative [Ricinus communis]
           gi|223529062|gb|EEF31047.1| Frataxin, mitochondrial
           precursor, putative [Ricinus communis]
          Length = 200

 Score =  231 bits (590), Expect = 3e-58
 Identities = 109/140 (77%), Positives = 128/140 (91%), Gaps = 1/140 (0%)
 Frame = -1

Query: 530 TSRVSFCSRPLNLD-EAEVPASIDYRSLLEEDEYHKLADSTIHDLQEKFEEYGDCSQVDG 354
           +S   FCSRPLNLD  ++ PA+IDY SLL+EDE+HKLADSTIHDLQEKFEEYGD  Q+DG
Sbjct: 61  SSSRDFCSRPLNLDAHSQGPATIDYSSLLQEDEFHKLADSTIHDLQEKFEEYGDGVQIDG 120

Query: 353 FDIDYGNQVLTLKLGNLGTFVLNKQTPNRQLWLSSPVSGPSRFDWDKSSQAWVYRRTKAN 174
           FDIDYGN+VLTLKLG+LGT+VLNKQTPNRQLWLSSPVSGPSR+DWD++++AWVYRRTKAN
Sbjct: 121 FDIDYGNEVLTLKLGDLGTYVLNKQTPNRQLWLSSPVSGPSRYDWDRNAEAWVYRRTKAN 180

Query: 173 LLWLLESEVEQLCGEPISLS 114
           L  +LESE+EQ+CGEPI L+
Sbjct: 181 LFEVLESELEQVCGEPIKLA 200


>ref|XP_003554058.1| PREDICTED: frataxin, mitochondrial-like [Glycine max]
          Length = 191

 Score =  221 bits (564), Expect = 3e-55
 Identities = 102/148 (68%), Positives = 124/148 (83%)
 Frame = -1

Query: 557 EHSFVSPTITSRVSFCSRPLNLDEAEVPASIDYRSLLEEDEYHKLADSTIHDLQEKFEEY 378
           E++ + P  +S  +FCSR  NLDE++ P +IDY SLL+E E+H+LADSTIH LQEK E+Y
Sbjct: 44  ENALLPPLSSSSRNFCSRSFNLDESQGPLTIDYSSLLQEGEFHRLADSTIHSLQEKLEDY 103

Query: 377 GDCSQVDGFDIDYGNQVLTLKLGNLGTFVLNKQTPNRQLWLSSPVSGPSRFDWDKSSQAW 198
           GD  +VDGFDIDYGN VLT+KLG+LGT+VLNKQTPNRQLWLSSPVSGPSRFDWD+ ++AW
Sbjct: 104 GDSVEVDGFDIDYGNDVLTIKLGDLGTYVLNKQTPNRQLWLSSPVSGPSRFDWDRDTKAW 163

Query: 197 VYRRTKANLLWLLESEVEQLCGEPISLS 114
           +YRR KANL  +LE E EQLCG+PI LS
Sbjct: 164 IYRRNKANLYKILEGEFEQLCGKPIDLS 191


>ref|XP_002319394.1| predicted protein [Populus trichocarpa] gi|222857770|gb|EEE95317.1|
           predicted protein [Populus trichocarpa]
          Length = 192

 Score =  221 bits (564), Expect = 3e-55
 Identities = 111/149 (74%), Positives = 125/149 (83%), Gaps = 2/149 (1%)
 Frame = -1

Query: 554 HSFVSPTITSRVSFCSRPLNLD--EAEVPASIDYRSLLEEDEYHKLADSTIHDLQEKFEE 381
           HS       SR  + S  LNL+  + E PA+IDYRSLL+EDE+H LADSTIHDLQEKFEE
Sbjct: 44  HSSSHSPPLSRTFYSSPLLNLNSTDTEGPAAIDYRSLLQEDEFHSLADSTIHDLQEKFEE 103

Query: 380 YGDCSQVDGFDIDYGNQVLTLKLGNLGTFVLNKQTPNRQLWLSSPVSGPSRFDWDKSSQA 201
           YGD  Q+DGFDIDYGN+VLTLKLG+LGT+VLNKQTPNRQLWLSSPVSGPSRFDWD+S QA
Sbjct: 104 YGDSVQIDGFDIDYGNEVLTLKLGDLGTYVLNKQTPNRQLWLSSPVSGPSRFDWDRSDQA 163

Query: 200 WVYRRTKANLLWLLESEVEQLCGEPISLS 114
           WVYRRTKANLL +LESE+ QL GEPI L+
Sbjct: 164 WVYRRTKANLLNVLESEMGQLFGEPIKLA 192