BLASTX nr result

ID: Coptis21_contig00005475 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00005475
         (893 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABK23235.1| unknown [Picea sitchensis]                             134   2e-29
ref|XP_003546759.1| PREDICTED: mitochondrial import inner membra...   130   3e-28
ref|XP_004141690.1| PREDICTED: mitochondrial import inner membra...   126   6e-27
ref|XP_003543579.1| PREDICTED: mitochondrial import inner membra...   126   8e-27
ref|XP_002278010.1| PREDICTED: mitochondrial import inner membra...   125   1e-26

>gb|ABK23235.1| unknown [Picea sitchensis]
          Length = 189

 Score =  134 bits (338), Expect = 2e-29
 Identities = 69/147 (46%), Positives = 87/147 (59%)
 Frame = +1

Query: 136 DLLFEEEAGIQRRSWGENVTXXXXXXXXXXXXXXXXXXIYEGIKSGEKGESRKIRVSRIL 315
           + LF+EEA +QRRSWGEN+T                  + EG+K+ E G+S K+RV+R+L
Sbjct: 43  EFLFQEEAAVQRRSWGENITYYTGCGYLLGAVSGASVGLVEGLKAREPGDSMKLRVNRVL 102

Query: 316 NSSGARGSKLGNSLAALGLIYAGLESGIVGYRNTDDVWNNVLAGLGTGAFYKVASGPRTX 495
           N+SG  G K GN L  +GL+YAGLESGIV  R TDD+ N+V AGLGTGA YK A+GPR+ 
Sbjct: 103 NASGHTGRKFGNRLGVIGLLYAGLESGIVAGRGTDDILNSVCAGLGTGALYKAAAGPRSA 162

Query: 496 XXXXXXXXXXXXXXXXXXXXXKRYVPI 576
                                KRYVPI
Sbjct: 163 AVAGAIGGLAVGALVAGKQALKRYVPI 189


>ref|XP_003546759.1| PREDICTED: mitochondrial import inner membrane translocase subunit
           tim23-like [Glycine max]
          Length = 188

 Score =  130 bits (328), Expect = 3e-28
 Identities = 77/181 (42%), Positives = 96/181 (53%)
 Frame = +1

Query: 34  SSRWNKQQTWLKNPRSQMENPNNPKYDLNQIYNFDLLFEEEAGIQRRSWGENVTXXXXXX 213
           SS   K  T L NP   +E P    Y L     +  LF EEA  +RRSWGEN+T      
Sbjct: 10  SSSDPKTPTRLYNPYKDLEVPIRNLYQLPTTPEY--LFVEEARRKRRSWGENLTFYTGCG 67

Query: 214 XXXXXXXXXXXXIYEGIKSGEKGESRKIRVSRILNSSGARGSKLGNSLAALGLIYAGLES 393
                       + +G+KS E G++ K+RV+R+LNSSG  G   GN L  +GL+YAG+ES
Sbjct: 68  YLAGAVGGAASGLIDGVKSFESGDTAKLRVNRVLNSSGHAGRAWGNRLGVIGLLYAGIES 127

Query: 394 GIVGYRNTDDVWNNVLAGLGTGAFYKVASGPRTXXXXXXXXXXXXXXXXXXXXXXKRYVP 573
           GIV  R+TDDVWN+V AGLGTGA Y+ A G R+                      KRYVP
Sbjct: 128 GIVAARDTDDVWNSVAAGLGTGALYRAARGVRSAAVAGAVGGVVVGVAVTAKQALKRYVP 187

Query: 574 I 576
           I
Sbjct: 188 I 188


>ref|XP_004141690.1| PREDICTED: mitochondrial import inner membrane translocase subunit
           tim23-like isoform 1 [Cucumis sativus]
           gi|449480553|ref|XP_004155928.1| PREDICTED:
           mitochondrial import inner membrane translocase subunit
           tim23-like isoform 1 [Cucumis sativus]
          Length = 190

 Score =  126 bits (317), Expect = 6e-27
 Identities = 75/166 (45%), Positives = 89/166 (53%), Gaps = 7/166 (4%)
 Frame = +1

Query: 100 NPKYDLNQIY-NFDL------LFEEEAGIQRRSWGENVTXXXXXXXXXXXXXXXXXXIYE 258
           NP  DL   Y NF L      LF+EEA  QRRSWGEN+T                  +  
Sbjct: 25  NPYKDLQVPYRNFQLPTSPEFLFDEEARRQRRSWGENLTFYTGCGYLAGAVGGASTGLVS 84

Query: 259 GIKSGEKGESRKIRVSRILNSSGARGSKLGNSLAALGLIYAGLESGIVGYRNTDDVWNNV 438
           G+KS E G++ K+R++RILNSSG  G   GN L  +GL+YAGLESGI   R+TDDVWN V
Sbjct: 85  GVKSFESGDTMKLRINRILNSSGHSGRLWGNRLGVIGLLYAGLESGIEAVRDTDDVWNCV 144

Query: 439 LAGLGTGAFYKVASGPRTXXXXXXXXXXXXXXXXXXXXXXKRYVPI 576
            AGLGTGA Y+ A G R+                      KRYVPI
Sbjct: 145 AAGLGTGALYRAARGVRSAAVAGAVGGVVVGLAVTGKQMLKRYVPI 190


>ref|XP_003543579.1| PREDICTED: mitochondrial import inner membrane translocase subunit
           tim23-like [Glycine max]
          Length = 188

 Score =  126 bits (316), Expect = 8e-27
 Identities = 74/176 (42%), Positives = 92/176 (52%)
 Frame = +1

Query: 49  KQQTWLKNPRSQMENPNNPKYDLNQIYNFDLLFEEEAGIQRRSWGENVTXXXXXXXXXXX 228
           K  T L NP   +E P    Y L     +  LF EEA  +RRSWGEN+T           
Sbjct: 15  KTPTRLYNPYKDLEVPIRNLYQLPTSPEY--LFVEEARRKRRSWGENLTFYTGCGYLSGA 72

Query: 229 XXXXXXXIYEGIKSGEKGESRKIRVSRILNSSGARGSKLGNSLAALGLIYAGLESGIVGY 408
                  +  G+KS E G++ K+RV+R+LNSSG  G   GN L  +GL+YAG+ESGI   
Sbjct: 73  VGGAASGLVGGVKSFESGDTAKLRVNRVLNSSGHAGRAWGNRLGVIGLLYAGIESGIEAT 132

Query: 409 RNTDDVWNNVLAGLGTGAFYKVASGPRTXXXXXXXXXXXXXXXXXXXXXXKRYVPI 576
           R+TDDVWN+V AGLGTGA Y+ A G R+                      KRYVPI
Sbjct: 133 RDTDDVWNSVAAGLGTGALYRAARGVRSAAVAGAVGGVVVGVAVTAKQALKRYVPI 188


>ref|XP_002278010.1| PREDICTED: mitochondrial import inner membrane translocase subunit
           tim23-like [Vitis vinifera]
          Length = 183

 Score =  125 bits (314), Expect = 1e-26
 Identities = 74/178 (41%), Positives = 97/178 (54%), Gaps = 12/178 (6%)
 Frame = +1

Query: 79  SQMENPN----NPKYDLN----QIYNF----DLLFEEEAGIQRRSWGENVTXXXXXXXXX 222
           SQ +N N    NP  DL      IY      + LF+EE+  QRRSWGEN+T         
Sbjct: 6   SQNDNDNRRLYNPYQDLQIPIQNIYKLPTSPEFLFQEESVAQRRSWGENLTYYTGIGYLS 65

Query: 223 XXXXXXXXXIYEGIKSGEKGESRKIRVSRILNSSGARGSKLGNSLAALGLIYAGLESGIV 402
                    + +G+K+ E G++ K+R++RILN+SG  G K GN    +GL+YAGLESGIV
Sbjct: 66  GALSGAAKGLVDGVKASEPGDTVKLRINRILNASGHAGRKFGNRAGVIGLMYAGLESGIV 125

Query: 403 GYRNTDDVWNNVLAGLGTGAFYKVASGPRTXXXXXXXXXXXXXXXXXXXXXXKRYVPI 576
             R+TDDV N+V+AGLGTGA Y+ A+G R+                      KRYVPI
Sbjct: 126 AVRDTDDVVNSVVAGLGTGALYRAAAGVRSAAVAGAIGGVVVGAAVTAKQVLKRYVPI 183


Top