BLASTX nr result

ID: Coptis21_contig00005338 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00005338
         (478 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN75139.1| hypothetical protein VITISV_040756 [Vitis vinifera]    94   2e-25
ref|XP_002272717.2| PREDICTED: uncharacterized protein LOC100247...    94   2e-25
emb|CAN64660.1| hypothetical protein VITISV_009615 [Vitis vinifera]    89   1e-22
ref|XP_002263925.2| PREDICTED: uncharacterized protein LOC100258...    87   4e-22
emb|CBI40561.3| unnamed protein product [Vitis vinifera]               87   3e-18

>emb|CAN75139.1| hypothetical protein VITISV_040756 [Vitis vinifera]
          Length = 2281

 Score = 93.6 bits (231), Expect(3) = 2e-25
 Identities = 48/91 (52%), Positives = 60/91 (65%), Gaps = 2/91 (2%)
 Frame = -1

Query: 268  GGCGSKILELRRILRANWASNLHNSAEKLTSNSQFPNVDSHIGCSSCLP--FVGKVFKNP 95
            GGCG++ LELRRI   NW  +L  SAE LT N   P++D   GCS CLP    G   K+ 
Sbjct: 1278 GGCGTETLELRRIFEPNWVDHLIKSAEDLTMNFGSPDIDFSQGCSLCLPTASTGSGEKHC 1337

Query: 94   GVRRAAFRSDSKDNYLYCPNAVDLRNDEIEH 2
             VRRAAFR +S D++LYCPN+  L ++EIEH
Sbjct: 1338 EVRRAAFRENSHDDFLYCPNSACLGDNEIEH 1368



 Score = 35.0 bits (79), Expect(3) = 2e-25
 Identities = 17/35 (48%), Positives = 21/35 (60%)
 Frame = -2

Query: 477  NEAYSSQRQYVERARSQDTDGKGATRASRKRSDWE 373
            NEA SS +Q+VER   Q T+ KG   A  +R  WE
Sbjct: 1208 NEAESSHQQFVERVNGQGTEVKGRIPAHDERYGWE 1242



 Score = 32.0 bits (71), Expect(3) = 2e-25
 Identities = 12/17 (70%), Positives = 13/17 (76%)
 Frame = -3

Query: 323  FPDWRTNIDCSIRCTPK 273
            FPDWR N+D SI C PK
Sbjct: 1259 FPDWRVNMDGSIPCPPK 1275


>ref|XP_002272717.2| PREDICTED: uncharacterized protein LOC100247074 [Vitis vinifera]
          Length = 1876

 Score = 93.6 bits (231), Expect(3) = 2e-25
 Identities = 48/91 (52%), Positives = 60/91 (65%), Gaps = 2/91 (2%)
 Frame = -1

Query: 268  GGCGSKILELRRILRANWASNLHNSAEKLTSNSQFPNVDSHIGCSSCLP--FVGKVFKNP 95
            GGCG++ LELRRI   NW  +L  SAE LT N   P++D   GCS CLP    G   K+ 
Sbjct: 1314 GGCGTETLELRRIFEPNWVDHLIKSAEDLTMNFGSPDIDFSQGCSLCLPTASTGSGEKHC 1373

Query: 94   GVRRAAFRSDSKDNYLYCPNAVDLRNDEIEH 2
             VRRAAFR +S D++LYCPN+  L ++EIEH
Sbjct: 1374 EVRRAAFRENSHDDFLYCPNSACLGDNEIEH 1404



 Score = 35.0 bits (79), Expect(3) = 2e-25
 Identities = 17/35 (48%), Positives = 21/35 (60%)
 Frame = -2

Query: 477  NEAYSSQRQYVERARSQDTDGKGATRASRKRSDWE 373
            NEA SS +Q+VER   Q T+ KG   A  +R  WE
Sbjct: 1244 NEAESSHQQFVERVNGQGTEVKGRIPAHDERYGWE 1278



 Score = 32.0 bits (71), Expect(3) = 2e-25
 Identities = 12/17 (70%), Positives = 13/17 (76%)
 Frame = -3

Query: 323  FPDWRTNIDCSIRCTPK 273
            FPDWR N+D SI C PK
Sbjct: 1295 FPDWRVNMDGSIPCPPK 1311


>emb|CAN64660.1| hypothetical protein VITISV_009615 [Vitis vinifera]
          Length = 1160

 Score = 88.6 bits (218), Expect(3) = 1e-22
 Identities = 45/94 (47%), Positives = 60/94 (63%), Gaps = 2/94 (2%)
 Frame = -1

Query: 277 QKSGGCGSKILELRRILRANWASNLHNSAEKLTSNSQFPNVDSHIGCSSCLPFV--GKVF 104
           ++ GGCG+ ILELRR  +ANW   L  S+E L  + Q P+ +   GCS C P V      
Sbjct: 420 KERGGCGTAILELRRNFKANWVMKLIQSSEDLICHYQLPDHNFSQGCSLCWPNVTGRNSE 479

Query: 103 KNPGVRRAAFRSDSKDNYLYCPNAVDLRNDEIEH 2
           +N  +R+AAFR    DN+LYCPNAV++ +DEIEH
Sbjct: 480 QNSEMRKAAFRKHGHDNFLYCPNAVNITDDEIEH 513



 Score = 32.7 bits (73), Expect(3) = 1e-22
 Identities = 15/32 (46%), Positives = 20/32 (62%)
 Frame = -2

Query: 477 NEAYSSQRQYVERARSQDTDGKGATRASRKRS 382
           +EA +S +Q+VERA  Q  DGK      RKR+
Sbjct: 352 SEAETSHQQFVERAHGQVADGKSKATTKRKRN 383



 Score = 29.6 bits (65), Expect(3) = 1e-22
 Identities = 12/18 (66%), Positives = 12/18 (66%)
 Frame = -3

Query: 323 FPDWRTNIDCSIRCTPKE 270
           FPDWR   D SI C PKE
Sbjct: 404 FPDWRATGDGSIPCPPKE 421


>ref|XP_002263925.2| PREDICTED: uncharacterized protein LOC100258626 [Vitis vinifera]
          Length = 1035

 Score = 87.0 bits (214), Expect(3) = 4e-22
 Identities = 44/94 (46%), Positives = 60/94 (63%), Gaps = 2/94 (2%)
 Frame = -1

Query: 277 QKSGGCGSKILELRRILRANWASNLHNSAEKLTSNSQFPNVDSHIGCSSCLPFV--GKVF 104
           ++ GGCG+ ILELRR  +ANW   L  S+E L  + Q P+ +   GCS C P V      
Sbjct: 420 KERGGCGTAILELRRNFKANWVMKLIQSSEDLICHYQLPDHNFSQGCSLCWPNVTGRNSE 479

Query: 103 KNPGVRRAAFRSDSKDNYLYCPNAVDLRNDEIEH 2
           +N  +R+AAFR    DN+L+CPNAV++ +DEIEH
Sbjct: 480 QNSEMRKAAFRKHGHDNFLFCPNAVNITDDEIEH 513



 Score = 32.7 bits (73), Expect(3) = 4e-22
 Identities = 15/32 (46%), Positives = 20/32 (62%)
 Frame = -2

Query: 477 NEAYSSQRQYVERARSQDTDGKGATRASRKRS 382
           +EA +S +Q+VERA  Q  DGK      RKR+
Sbjct: 352 SEAETSHQQFVERAHGQVADGKSKATTKRKRN 383



 Score = 29.6 bits (65), Expect(3) = 4e-22
 Identities = 12/18 (66%), Positives = 12/18 (66%)
 Frame = -3

Query: 323 FPDWRTNIDCSIRCTPKE 270
           FPDWR   D SI C PKE
Sbjct: 404 FPDWRATGDGSIPCPPKE 421


>emb|CBI40561.3| unnamed protein product [Vitis vinifera]
          Length = 897

 Score = 87.0 bits (214), Expect(2) = 3e-18
 Identities = 44/94 (46%), Positives = 60/94 (63%), Gaps = 2/94 (2%)
 Frame = -1

Query: 277 QKSGGCGSKILELRRILRANWASNLHNSAEKLTSNSQFPNVDSHIGCSSCLPFV--GKVF 104
           ++ GGCG+ ILELRR  +ANW   L  S+E L  + Q P+ +   GCS C P V      
Sbjct: 374 KERGGCGTAILELRRNFKANWVMKLIQSSEDLICHYQLPDHNFSQGCSLCWPNVTGRNSE 433

Query: 103 KNPGVRRAAFRSDSKDNYLYCPNAVDLRNDEIEH 2
           +N  +R+AAFR    DN+L+CPNAV++ +DEIEH
Sbjct: 434 QNSEMRKAAFRKHGHDNFLFCPNAVNITDDEIEH 467



 Score = 29.6 bits (65), Expect(2) = 3e-18
 Identities = 12/18 (66%), Positives = 12/18 (66%)
 Frame = -3

Query: 323 FPDWRTNIDCSIRCTPKE 270
           FPDWR   D SI C PKE
Sbjct: 358 FPDWRATGDGSIPCPPKE 375


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