BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00005316
         (2575 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002312936.1| predicted protein [Populus trichocarpa] gi|2...   397   e-108
ref|XP_002529802.1| geranyl geranyl pyrophosphate synthase, puta...   397   e-107
ref|XP_004144868.1| PREDICTED: heterodimeric geranylgeranyl pyro...   396   e-107
ref|XP_003631564.1| PREDICTED: geranylgeranyl pyrophosphate synt...   389   e-105
ref|XP_003631563.1| PREDICTED: geranylgeranyl pyrophosphate synt...   389   e-105

>ref|XP_002312936.1| predicted protein [Populus trichocarpa] gi|222849344|gb|EEE86891.1|
            predicted protein [Populus trichocarpa]
          Length = 314

 Score =  397 bits (1020), Expect = e-108
 Identities = 210/310 (67%), Positives = 240/310 (77%), Gaps = 1/310 (0%)
 Frame = +1

Query: 493  RCSSSVSTPMQS-QFDLKTYWTTLITEINHKLDQSIPIKYPQQIYESMRYSVLAHGAKRA 669
            +CS SVST  ++ QFDLKTYWTTLI EIN KLDQ++PI+YP +IYE+MRYSVLA GAKRA
Sbjct: 5    QCSLSVSTHSKTPQFDLKTYWTTLILEINQKLDQAVPIQYPDKIYEAMRYSVLAKGAKRA 64

Query: 670  SPIMCIAVCELFGVSRLAAFPTACALEMVHEASLIHXXXXXXXXXXFRRGRLSNHAIYGV 849
             P+MC+A CELFG +R AAFPTACALEMVH ASLIH           RRG+ SNH IYGV
Sbjct: 65   PPVMCVAACELFGGNRHAAFPTACALEMVHSASLIHDDLPCMDDDPSRRGQPSNHKIYGV 124

Query: 850  DMAILAGDALFPLGFQHIVSDTPSGLVPETSILRVIAEIARAVGSTGMAAGQFLDLTNAE 1029
            DMAILAGDALFPLGF+HIVS TPS LVPE  +L VIAEIARAVGSTGMAAGQFLDL    
Sbjct: 125  DMAILAGDALFPLGFRHIVSHTPSDLVPEPRLLSVIAEIARAVGSTGMAAGQFLDLEGGP 184

Query: 1030 DSQTEYVQEKKFGELAECSAVCGGLLGGATDEELERLRKYGRAVGVLYQVVEEILEMXXX 1209
            +S  E+VQEKKFGE+ ECSAVCGGLL GA D+E++RLR+YGRAVGVLYQVV++ILE    
Sbjct: 185  NS-VEFVQEKKFGEMGECSAVCGGLLAGAKDDEIQRLRRYGRAVGVLYQVVDDILE-AKT 242

Query: 1210 XXXXXXXXXXXXXXXSYAKVVGIEKALEKAEELRSRAKKELDGFEKKYGERVNPLYSFVD 1389
                           SY  + G+EKA+E AEELR++AK+ELDGFE KYGE V PLYSFVD
Sbjct: 243  MKSKVDEDKKKRKGKSYVALYGVEKAIEVAEELRAKAKEELDGFE-KYGESVLPLYSFVD 301

Query: 1390 YAVERNFVMG 1419
            YA +R F  G
Sbjct: 302  YAADRGFSFG 311


>ref|XP_002529802.1| geranyl geranyl pyrophosphate synthase, putative [Ricinus communis]
            gi|223530713|gb|EEF32584.1| geranyl geranyl pyrophosphate
            synthase, putative [Ricinus communis]
          Length = 345

 Score =  397 bits (1019), Expect = e-107
 Identities = 206/311 (66%), Positives = 240/311 (77%), Gaps = 3/311 (0%)
 Frame = +1

Query: 496  CSSSVSTPMQS---QFDLKTYWTTLITEINHKLDQSIPIKYPQQIYESMRYSVLAHGAKR 666
            CS +VS   QS   QFDLKTYWTTLI EIN KLDQ+IP+++P+QIYE+MRYS LA GAKR
Sbjct: 37   CSPTVSVSSQSKSTQFDLKTYWTTLIAEINQKLDQAIPVQFPEQIYEAMRYSALAKGAKR 96

Query: 667  ASPIMCIAVCELFGVSRLAAFPTACALEMVHEASLIHXXXXXXXXXXFRRGRLSNHAIYG 846
            A P+MC+A CELFG +RLAAFPTACALEMVH ASLIH           RRG+ SNH IYG
Sbjct: 97   APPVMCVAACELFGGNRLAAFPTACALEMVHTASLIHDDLPCMDDDPSRRGQPSNHTIYG 156

Query: 847  VDMAILAGDALFPLGFQHIVSDTPSGLVPETSILRVIAEIARAVGSTGMAAGQFLDLTNA 1026
            VDMAILAGDALFPLG++HIVS TP+GLVPE  +LRVIAEIARAVGSTGMAAGQFLDL   
Sbjct: 157  VDMAILAGDALFPLGYRHIVSHTPTGLVPEPRLLRVIAEIARAVGSTGMAAGQFLDLEGG 216

Query: 1027 EDSQTEYVQEKKFGELAECSAVCGGLLGGATDEELERLRKYGRAVGVLYQVVEEILEMXX 1206
              S  E+ QEKK+GE++ECSAVCGGLL GA D+E++RLR+YGRAVGVLYQV++++LE   
Sbjct: 217  -PSFVEFAQEKKYGEMSECSAVCGGLLAGAEDDEIQRLRRYGRAVGVLYQVIDDVLE--- 272

Query: 1207 XXXXXXXXXXXXXXXXSYAKVVGIEKALEKAEELRSRAKKELDGFEKKYGERVNPLYSFV 1386
                            SY  + GIEKA+E AEELR++AKKELDGF  KYG+ V PLYSFV
Sbjct: 273  AKAMNKENEEKRRNGKSYVSLYGIEKAMEVAEELRTQAKKELDGF-AKYGDSVMPLYSFV 331

Query: 1387 DYAVERNFVMG 1419
            DYA +R F +G
Sbjct: 332  DYAADRGFTIG 342


>ref|XP_004144868.1| PREDICTED: heterodimeric geranylgeranyl pyrophosphate synthase small
            subunit, chloroplastic-like [Cucumis sativus]
            gi|449508802|ref|XP_004163415.1| PREDICTED: heterodimeric
            geranylgeranyl pyrophosphate synthase small subunit,
            chloroplastic-like [Cucumis sativus]
          Length = 335

 Score =  396 bits (1018), Expect = e-107
 Identities = 208/311 (66%), Positives = 239/311 (76%), Gaps = 5/311 (1%)
 Frame = +1

Query: 493  RCSSSVSTPMQSQ-----FDLKTYWTTLITEINHKLDQSIPIKYPQQIYESMRYSVLAHG 657
            RCSSS S  + SQ     FDLKTYW  LI EIN KLD+++P++YP QIYE+MRYSVLA G
Sbjct: 22   RCSSSSSPALSSQPQSIHFDLKTYWKQLILEINQKLDEAVPLQYPDQIYEAMRYSVLAQG 81

Query: 658  AKRASPIMCIAVCELFGVSRLAAFPTACALEMVHEASLIHXXXXXXXXXXFRRGRLSNHA 837
            AKRA P+MC+A CELFGV RLAAFPTACALEMVHEASLIH           RRG+ SNH 
Sbjct: 82   AKRAPPVMCVAACELFGVDRLAAFPTACALEMVHEASLIHDDLPCMDDDPSRRGQPSNHT 141

Query: 838  IYGVDMAILAGDALFPLGFQHIVSDTPSGLVPETSILRVIAEIARAVGSTGMAAGQFLDL 1017
            +YGVDMAILAGDALFPLGFQHIVS TP  LVPE+ +LRV+AEIARAVGS GMAAGQFLDL
Sbjct: 142  VYGVDMAILAGDALFPLGFQHIVSHTPFDLVPESRLLRVVAEIARAVGSRGMAAGQFLDL 201

Query: 1018 TNAEDSQTEYVQEKKFGELAECSAVCGGLLGGATDEELERLRKYGRAVGVLYQVVEEILE 1197
                +S  E+VQEKKFGE+A+CSAVCGGLL GA D E++RLR+YGRAVGVLYQVV++ILE
Sbjct: 202  EGGPNS-VEFVQEKKFGEMAQCSAVCGGLLAGAEDHEIQRLRRYGRAVGVLYQVVDDILE 260

Query: 1198 MXXXXXXXXXXXXXXXXXXSYAKVVGIEKALEKAEELRSRAKKELDGFEKKYGERVNPLY 1377
                               SY +V GIEKA E AEELR++AK EL+GFE KYG++V PLY
Sbjct: 261  -EQSKKLDYTDESKRSKGKSYVEVYGIEKAKEVAEELRAKAKNELEGFE-KYGDQVMPLY 318

Query: 1378 SFVDYAVERNF 1410
            SFVDYA +R+F
Sbjct: 319  SFVDYAADRSF 329


>ref|XP_003631564.1| PREDICTED: geranylgeranyl pyrophosphate synthase-related protein,
            chloroplastic-like isoform 2 [Vitis vinifera]
          Length = 341

 Score =  389 bits (999), Expect = e-105
 Identities = 209/345 (60%), Positives = 250/345 (72%), Gaps = 3/345 (0%)
 Frame = +1

Query: 391  MPFAISTLNPSLINISISYQKRSNFHFLHQNHRFRCSS---SVSTPMQSQFDLKTYWTTL 561
            M F  +   PS   +      RS+   L      RCSS   SVS     QFDL++YWTTL
Sbjct: 1    MAFTTALSLPSAARLHHRLPNRSS---LSLPRTIRCSSPSISVSPSKSMQFDLRSYWTTL 57

Query: 562  ITEINHKLDQSIPIKYPQQIYESMRYSVLAHGAKRASPIMCIAVCELFGVSRLAAFPTAC 741
            I+EIN KL+++IP+KYPQQIYE+MRYSVLA G KRA P+MC+AVCELFG  RLAAFPTAC
Sbjct: 58   ISEINTKLEEAIPVKYPQQIYEAMRYSVLAKGGKRAPPVMCVAVCELFGGDRLAAFPTAC 117

Query: 742  ALEMVHEASLIHXXXXXXXXXXFRRGRLSNHAIYGVDMAILAGDALFPLGFQHIVSDTPS 921
            ALEMVH ASLIH           RRG+ SNH +YGVDMAILAGDALFPLGF+HIVS TPS
Sbjct: 118  ALEMVHAASLIHDDLPCMDDDPSRRGQPSNHTVYGVDMAILAGDALFPLGFRHIVSHTPS 177

Query: 922  GLVPETSILRVIAEIARAVGSTGMAAGQFLDLTNAEDSQTEYVQEKKFGELAECSAVCGG 1101
             LVPE  ++RVIAEIAR+VGSTGMAAGQFLDL  A +S  ++VQ KKFGE+AECSAVCGG
Sbjct: 178  HLVPEGQLIRVIAEIARSVGSTGMAAGQFLDLEGAPNS-VDFVQRKKFGEMAECSAVCGG 236

Query: 1102 LLGGATDEELERLRKYGRAVGVLYQVVEEILEMXXXXXXXXXXXXXXXXXXSYAKVVGIE 1281
             LGGA D+++ RLR+YGRAVG+LYQVV+++L+                   SY  V G+E
Sbjct: 237  FLGGAADDDILRLRRYGRAVGMLYQVVDDVLK---AKTKSEEDEEKKKKGKSYVDVYGME 293

Query: 1282 KALEKAEELRSRAKKELDGFEKKYGERVNPLYSFVDYAVERNFVM 1416
            KA+E AEELR++AK+EL GF+ KYG+ V PLYSFVD+A ER F +
Sbjct: 294  KAMEVAEELRAKAKRELSGFD-KYGDSVVPLYSFVDFAAERGFTI 337


>ref|XP_003631563.1| PREDICTED: geranylgeranyl pyrophosphate synthase-related protein,
            chloroplastic-like isoform 1 [Vitis vinifera]
          Length = 341

 Score =  389 bits (998), Expect = e-105
 Identities = 208/345 (60%), Positives = 251/345 (72%), Gaps = 3/345 (0%)
 Frame = +1

Query: 391  MPFAISTLNPSLINISISYQKRSNFHFLHQNHRFRCSS---SVSTPMQSQFDLKTYWTTL 561
            M F  +   PS   +      RS+   L+     RC+S   SVS     QFDL++YWTTL
Sbjct: 1    MAFTTALSLPSAARLHHRLPNRSS---LNLPRTIRCTSPSISVSPSKSMQFDLRSYWTTL 57

Query: 562  ITEINHKLDQSIPIKYPQQIYESMRYSVLAHGAKRASPIMCIAVCELFGVSRLAAFPTAC 741
            I+EIN KL+++IP+KYPQQIYE+MRYSVLA G KRA P+MC+AVCELFG  RLAAFPTAC
Sbjct: 58   ISEINTKLEEAIPVKYPQQIYEAMRYSVLAKGGKRAPPVMCVAVCELFGGDRLAAFPTAC 117

Query: 742  ALEMVHEASLIHXXXXXXXXXXFRRGRLSNHAIYGVDMAILAGDALFPLGFQHIVSDTPS 921
            ALEMVH ASLIH           RRG+ SNH +YGVDMAILAGDALFPLGF+HIVS TPS
Sbjct: 118  ALEMVHAASLIHDDLPCMDDDPSRRGQPSNHTVYGVDMAILAGDALFPLGFRHIVSHTPS 177

Query: 922  GLVPETSILRVIAEIARAVGSTGMAAGQFLDLTNAEDSQTEYVQEKKFGELAECSAVCGG 1101
             LVPE  ++RVIAEIAR+VGSTGMAAGQFLDL  A +S  ++VQ KKFGE+AECSAVCGG
Sbjct: 178  HLVPEGQLIRVIAEIARSVGSTGMAAGQFLDLEGAPNS-VDFVQRKKFGEMAECSAVCGG 236

Query: 1102 LLGGATDEELERLRKYGRAVGVLYQVVEEILEMXXXXXXXXXXXXXXXXXXSYAKVVGIE 1281
             LGGA D+++ RLR+YGRAVG+LYQVV+++L+                   SY  V G+E
Sbjct: 237  FLGGAADDDILRLRRYGRAVGMLYQVVDDVLK---AKTKSEEDEEKKKKGKSYVDVYGME 293

Query: 1282 KALEKAEELRSRAKKELDGFEKKYGERVNPLYSFVDYAVERNFVM 1416
            KA+E AEELR++AK+EL GF+ KYG+ V PLYSFVD+A ER F +
Sbjct: 294  KAMEVAEELRAKAKRELSGFD-KYGDSVVPLYSFVDFAAERGFTI 337