BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00005239
         (1185 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002270577.2| PREDICTED: E3 ubiquitin ligase BIG BROTHER-r...   278   1e-72
emb|CBI29028.3| unnamed protein product [Vitis vinifera]              278   1e-72
ref|XP_002521533.1| ring finger protein, putative [Ricinus commu...   266   1e-68
ref|XP_003592714.1| RING finger protein [Medicago truncatula] gi...   258   2e-66
gb|ACJ85919.1| unknown [Medicago truncatula] gi|388515517|gb|AFK...   256   6e-66

>ref|XP_002270577.2| PREDICTED: E3 ubiquitin ligase BIG BROTHER-related [Vitis vinifera]
          Length = 452

 Score =  278 bits (712), Expect = 1e-72
 Identities = 161/271 (59%), Positives = 181/271 (66%), Gaps = 24/271 (8%)
 Frame = -2

Query: 824 PNSN----RQTSRTPFTNLSQVDADMALARTLQEQERAYMMLRMNSGEGSDDYGSSVTGS 657
           PNSN    RQ+SRTPFTNLSQVDAD+ALARTLQEQERAYMMLR+N GEGS DYGS   GS
Sbjct: 186 PNSNQAPPRQSSRTPFTNLSQVDADLALARTLQEQERAYMMLRIN-GEGS-DYGSWEAGS 243

Query: 656 Y--------------VXXXXXXXXXXXXXXXXXXXXXDXXXXXXXXXXXLDP------SA 537
           Y              V                                  +P      + 
Sbjct: 244 YFNEEEFDDPNDGTDVDDGVDDEDEDEGEYDGTDEDAFDVHAQADDGEDDNPTIEFDPAV 303

Query: 536 FSSDEAFARALQDAEERELAVRLMALTGVNDITGWVAXXXXXXXXXXXXTWEEVDPDELS 357
           FSSDEA+ARALQ  EE+E+A RL+AL G++D                  TWEEVDPDELS
Sbjct: 304 FSSDEAYARALQHIEEQEMAARLLALAGIHD---HGVEDTEDHGGNSQDTWEEVDPDELS 360

Query: 356 YEELIALGEVVGTESRGLSADTIASLPSVTYKAQSNQDGSAEQCVICRLEYEDEDTLTVL 177
           YEEL+ALGEV+GTESRGLS+DTIASLPSVTYKAQSNQ+GS + CVICRL+YED +TLTVL
Sbjct: 361 YEELLALGEVIGTESRGLSSDTIASLPSVTYKAQSNQEGSNDSCVICRLDYEDGETLTVL 420

Query: 176 SCKHSYHSECINNWLQINKVCPVCSAEVSTS 84
           SCKHSYHSECINNWLQINKVCP+CS EVS+S
Sbjct: 421 SCKHSYHSECINNWLQINKVCPICSTEVSSS 451


>emb|CBI29028.3| unnamed protein product [Vitis vinifera]
          Length = 308

 Score =  278 bits (712), Expect = 1e-72
 Identities = 161/271 (59%), Positives = 181/271 (66%), Gaps = 24/271 (8%)
 Frame = -2

Query: 824 PNSN----RQTSRTPFTNLSQVDADMALARTLQEQERAYMMLRMNSGEGSDDYGSSVTGS 657
           PNSN    RQ+SRTPFTNLSQVDAD+ALARTLQEQERAYMMLR+N GEGS DYGS   GS
Sbjct: 42  PNSNQAPPRQSSRTPFTNLSQVDADLALARTLQEQERAYMMLRIN-GEGS-DYGSWEAGS 99

Query: 656 Y--------------VXXXXXXXXXXXXXXXXXXXXXDXXXXXXXXXXXLDP------SA 537
           Y              V                                  +P      + 
Sbjct: 100 YFNEEEFDDPNDGTDVDDGVDDEDEDEGEYDGTDEDAFDVHAQADDGEDDNPTIEFDPAV 159

Query: 536 FSSDEAFARALQDAEERELAVRLMALTGVNDITGWVAXXXXXXXXXXXXTWEEVDPDELS 357
           FSSDEA+ARALQ  EE+E+A RL+AL G++D                  TWEEVDPDELS
Sbjct: 160 FSSDEAYARALQHIEEQEMAARLLALAGIHD---HGVEDTEDHGGNSQDTWEEVDPDELS 216

Query: 356 YEELIALGEVVGTESRGLSADTIASLPSVTYKAQSNQDGSAEQCVICRLEYEDEDTLTVL 177
           YEEL+ALGEV+GTESRGLS+DTIASLPSVTYKAQSNQ+GS + CVICRL+YED +TLTVL
Sbjct: 217 YEELLALGEVIGTESRGLSSDTIASLPSVTYKAQSNQEGSNDSCVICRLDYEDGETLTVL 276

Query: 176 SCKHSYHSECINNWLQINKVCPVCSAEVSTS 84
           SCKHSYHSECINNWLQINKVCP+CS EVS+S
Sbjct: 277 SCKHSYHSECINNWLQINKVCPICSTEVSSS 307


>ref|XP_002521533.1| ring finger protein, putative [Ricinus communis]
           gi|223539211|gb|EEF40804.1| ring finger protein,
           putative [Ricinus communis]
          Length = 316

 Score =  266 bits (679), Expect = 1e-68
 Identities = 154/272 (56%), Positives = 172/272 (63%), Gaps = 21/272 (7%)
 Frame = -2

Query: 836 ESNLPNSNRQTSRTPFTNLSQVDADMALARTLQEQERAYMMLRMNSGEGSDDYGSSVTGS 657
           E   P     + RTPFTNLSQVDAD+ALARTLQEQERAYMMLR N+ EGS DYGS    S
Sbjct: 47  EQEDPPRQSSSRRTPFTNLSQVDADLALARTLQEQERAYMMLRFNNIEGS-DYGSWEAAS 105

Query: 656 YV----XXXXXXXXXXXXXXXXXXXXXDXXXXXXXXXXXLDPSAF--------------- 534
           Y+                         D            D  AF               
Sbjct: 106 YLHHHDDDDFGDPDDDDDDDDDDDDETDGDDDDEDDHGTDDVDAFDVHESGGAAADLDPC 165

Query: 533 --SSDEAFARALQDAEERELAVRLMALTGVNDITGWVAXXXXXXXXXXXXTWEEVDPDEL 360
             SSDEA+ARALQDAEERE+A RL+A  G+ND                   WEEVDPDEL
Sbjct: 166 MFSSDEAYARALQDAEEREMAARLLAFAGIND----QVEDTDDHGGNSQDAWEEVDPDEL 221

Query: 359 SYEELIALGEVVGTESRGLSADTIASLPSVTYKAQSNQDGSAEQCVICRLEYEDEDTLTV 180
           SYEELIALGEVVG+ESRGLSADTIASLP+V YKA S+Q+G+ + CVICRL+YED +TLT+
Sbjct: 222 SYEELIALGEVVGSESRGLSADTIASLPTVNYKAGSSQNGTNDSCVICRLDYEDGETLTL 281

Query: 179 LSCKHSYHSECINNWLQINKVCPVCSAEVSTS 84
           LSCKHSYHSECINNWL+INKVCPVCS EVSTS
Sbjct: 282 LSCKHSYHSECINNWLKINKVCPVCSTEVSTS 313


>ref|XP_003592714.1| RING finger protein [Medicago truncatula]
           gi|355481762|gb|AES62965.1| RING finger protein
           [Medicago truncatula]
          Length = 339

 Score =  258 bits (659), Expect = 2e-66
 Identities = 147/278 (52%), Positives = 174/278 (62%), Gaps = 25/278 (8%)
 Frame = -2

Query: 842 EPESNLPNSNRQTSRTPFTNLSQVDADMALARTLQEQERAYMMLRMN-------SGEGS- 687
           + ++    + +Q SRTPFTNLSQVDAD+ALARTLQEQERAYMMLRMN       S EG  
Sbjct: 58  QQQTGSETNTQQPSRTPFTNLSQVDADLALARTLQEQERAYMMLRMNNDGSDYGSWEGGS 117

Query: 686 ------DDYGSSVTGSYVXXXXXXXXXXXXXXXXXXXXXDXXXXXXXXXXXL-------- 549
                 DD+     G+ V                                          
Sbjct: 118 YLHDDGDDFDDLHDGTDVDDEDDDEDDDNEEDYEDEDEDAFDVHDHASVGDRENNPVIEF 177

Query: 548 DPSAFSSDEAFARALQDAEERELAVRLMALTGVNDITGWV---AXXXXXXXXXXXXTWEE 378
           DP  FSSDEA+ARALQ+AEERE+A RL+AL G++D++  +   A             WE+
Sbjct: 178 DPELFSSDEAYARALQEAEEREMAARLLALAGIHDLSFSITEDAEDMEEHAANSQDAWED 237

Query: 377 VDPDELSYEELIALGEVVGTESRGLSADTIASLPSVTYKAQSNQDGSAEQCVICRLEYED 198
           VDPDELSYEEL+ALGEVVGTESRGLS DTIA LPSV YKA S+Q GS + CVICR++YED
Sbjct: 238 VDPDELSYEELLALGEVVGTESRGLSTDTIACLPSVNYKAGSDQLGSNDSCVICRVDYED 297

Query: 197 EDTLTVLSCKHSYHSECINNWLQINKVCPVCSAEVSTS 84
           +++LTVLSCKH YH ECINNWL+INKVCPVCS EVS S
Sbjct: 298 DESLTVLSCKHLYHPECINNWLKINKVCPVCSTEVSAS 335


>gb|ACJ85919.1| unknown [Medicago truncatula] gi|388515517|gb|AFK45820.1| unknown
           [Medicago truncatula]
          Length = 339

 Score =  256 bits (655), Expect = 6e-66
 Identities = 146/278 (52%), Positives = 174/278 (62%), Gaps = 25/278 (8%)
 Frame = -2

Query: 842 EPESNLPNSNRQTSRTPFTNLSQVDADMALARTLQEQERAYMMLRMN-------SGEGS- 687
           + ++    + +Q SRTPFTNLSQVDAD+ALARTLQE+ERAYMMLRMN       S EG  
Sbjct: 58  QQQTGSETNTQQPSRTPFTNLSQVDADLALARTLQERERAYMMLRMNNDGSDYGSWEGGS 117

Query: 686 ------DDYGSSVTGSYVXXXXXXXXXXXXXXXXXXXXXDXXXXXXXXXXXL-------- 549
                 DD+     G+ V                                          
Sbjct: 118 YLHDDGDDFDDLHDGTDVDDEDDDEDDDNEEDYEDEDEDAFDVHDHASVGDRENNPVIEF 177

Query: 548 DPSAFSSDEAFARALQDAEERELAVRLMALTGVNDITGWV---AXXXXXXXXXXXXTWEE 378
           DP  FSSDEA+ARALQ+AEERE+A RL+AL G++D++  +   A             WE+
Sbjct: 178 DPELFSSDEAYARALQEAEEREMAARLLALAGIHDLSFSITEDAEDMEEHAANSQDAWED 237

Query: 377 VDPDELSYEELIALGEVVGTESRGLSADTIASLPSVTYKAQSNQDGSAEQCVICRLEYED 198
           VDPDELSYEEL+ALGEVVGTESRGLS DTIA LPSV YKA S+Q GS + CVICR++YED
Sbjct: 238 VDPDELSYEELLALGEVVGTESRGLSTDTIACLPSVNYKAGSDQLGSNDSCVICRVDYED 297

Query: 197 EDTLTVLSCKHSYHSECINNWLQINKVCPVCSAEVSTS 84
           +++LTVLSCKH YH ECINNWL+INKVCPVCS EVS S
Sbjct: 298 DESLTVLSCKHLYHPECINNWLKINKVCPVCSTEVSAS 335