BLASTX nr result

ID: Coptis21_contig00005196 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00005196
         (528 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI20464.3| unnamed protein product [Vitis vinifera]              285   3e-75
ref|XP_002280346.1| PREDICTED: WD repeat-containing protein 25-l...   285   3e-75
ref|XP_002319259.1| predicted protein [Populus trichocarpa] gi|2...   277   8e-73
ref|XP_003556021.1| PREDICTED: WD repeat-containing protein 25-l...   269   2e-70
emb|CAN83694.1| hypothetical protein VITISV_013363 [Vitis vinifera]   268   4e-70

>emb|CBI20464.3| unnamed protein product [Vitis vinifera]
          Length = 506

 Score =  285 bits (729), Expect = 3e-75
 Identities = 136/177 (76%), Positives = 157/177 (88%), Gaps = 1/177 (0%)
 Frame = +1

Query: 1   IQWSPTHAHLLASAGMDY-VCVWNVWSTEGQRKARVFNYHNAAVKHLRWSHDGLSLLSCG 177
           IQWSPTHAHLLASAGMD+ +C+WN WS + Q+KAR F+YHNAAVK ++W   GLS+LSCG
Sbjct: 215 IQWSPTHAHLLASAGMDHAICIWNAWSRD-QKKAREFSYHNAAVKDVKWLQQGLSVLSCG 273

Query: 178 YDCSSRLVDVEKGIQTQLFKEDQVLGVIKFHPDNCSLFISGGSKGLLRLWDIRVGRVVQE 357
           YDCSSRL+DVEKG+QTQ+F EDQV+GVIK HPDN +LF+SGGSKG LRLWDIR G+VV E
Sbjct: 274 YDCSSRLIDVEKGLQTQIFTEDQVVGVIKLHPDNSNLFLSGGSKGRLRLWDIRTGKVVHE 333

Query: 358 YMRNLGPILDIEFSNDAKQFISSSDISKSNATENSIVVWDVLRQVPLSNQVYVEAYT 528
           Y+R LGPILDIEF+ +AKQFISSSD+S SN +ENSIVVWDV RQVPLSNQVYVEAYT
Sbjct: 334 YIRGLGPILDIEFTVNAKQFISSSDVSGSNMSENSIVVWDVSRQVPLSNQVYVEAYT 390


>ref|XP_002280346.1| PREDICTED: WD repeat-containing protein 25-like [Vitis vinifera]
          Length = 418

 Score =  285 bits (729), Expect = 3e-75
 Identities = 136/177 (76%), Positives = 157/177 (88%), Gaps = 1/177 (0%)
 Frame = +1

Query: 1   IQWSPTHAHLLASAGMDY-VCVWNVWSTEGQRKARVFNYHNAAVKHLRWSHDGLSLLSCG 177
           IQWSPTHAHLLASAGMD+ +C+WN WS + Q+KAR F+YHNAAVK ++W   GLS+LSCG
Sbjct: 127 IQWSPTHAHLLASAGMDHAICIWNAWSRD-QKKAREFSYHNAAVKDVKWLQQGLSVLSCG 185

Query: 178 YDCSSRLVDVEKGIQTQLFKEDQVLGVIKFHPDNCSLFISGGSKGLLRLWDIRVGRVVQE 357
           YDCSSRL+DVEKG+QTQ+F EDQV+GVIK HPDN +LF+SGGSKG LRLWDIR G+VV E
Sbjct: 186 YDCSSRLIDVEKGLQTQIFTEDQVVGVIKLHPDNSNLFLSGGSKGRLRLWDIRTGKVVHE 245

Query: 358 YMRNLGPILDIEFSNDAKQFISSSDISKSNATENSIVVWDVLRQVPLSNQVYVEAYT 528
           Y+R LGPILDIEF+ +AKQFISSSD+S SN +ENSIVVWDV RQVPLSNQVYVEAYT
Sbjct: 246 YIRGLGPILDIEFTVNAKQFISSSDVSGSNMSENSIVVWDVSRQVPLSNQVYVEAYT 302


>ref|XP_002319259.1| predicted protein [Populus trichocarpa] gi|222857635|gb|EEE95182.1|
           predicted protein [Populus trichocarpa]
          Length = 408

 Score =  277 bits (708), Expect = 8e-73
 Identities = 133/177 (75%), Positives = 156/177 (88%), Gaps = 1/177 (0%)
 Frame = +1

Query: 1   IQWSPTHAHLLASAGMDY-VCVWNVWSTEGQRKARVFNYHNAAVKHLRWSHDGLSLLSCG 177
           + WSP+HAHLLASAGMD  VCVWNVWS + Q+ AR+F YHNAAVK ++WS  GLS+LSCG
Sbjct: 117 LDWSPSHAHLLASAGMDQTVCVWNVWSRD-QKIARLFRYHNAAVKDVKWSPQGLSVLSCG 175

Query: 178 YDCSSRLVDVEKGIQTQLFKEDQVLGVIKFHPDNCSLFISGGSKGLLRLWDIRVGRVVQE 357
           YDCSSRL+DVEKGI+TQ+FKEDQV+GVIKF PDN ++F+SGGSKG LRLWDIR G VV+E
Sbjct: 176 YDCSSRLIDVEKGIETQIFKEDQVVGVIKFCPDNSNIFLSGGSKGCLRLWDIRNGNVVRE 235

Query: 358 YMRNLGPILDIEFSNDAKQFISSSDISKSNATENSIVVWDVLRQVPLSNQVYVEAYT 528
           Y+R LGPILD+EF+ + KQFISSSD+S SN +ENSI+VWDV RQVPLSNQVYVEAYT
Sbjct: 236 YIRGLGPILDVEFTINGKQFISSSDVSGSNLSENSIIVWDVSRQVPLSNQVYVEAYT 292


>ref|XP_003556021.1| PREDICTED: WD repeat-containing protein 25-like [Glycine max]
          Length = 359

 Score =  269 bits (688), Expect = 2e-70
 Identities = 123/177 (69%), Positives = 154/177 (87%), Gaps = 1/177 (0%)
 Frame = +1

Query: 1   IQWSPTHAHLLASAGMDY-VCVWNVWSTEGQRKARVFNYHNAAVKHLRWSHDGLSLLSCG 177
           I WS +HAHLLASAGMD+ VC+WNVWS   Q+KA V N+HNAAVK ++WS  G  LLSCG
Sbjct: 68  IHWSSSHAHLLASAGMDHAVCIWNVWS-RNQKKACVLNFHNAAVKDVKWSQQGHFLLSCG 126

Query: 178 YDCSSRLVDVEKGIQTQLFKEDQVLGVIKFHPDNCSLFISGGSKGLLRLWDIRVGRVVQE 357
           YDC+SRL+DVEKG++TQ+F+EDQ++GVIKFHPDN +LF+SGGSKG ++LWD R G++V  
Sbjct: 127 YDCTSRLIDVEKGLETQVFREDQIVGVIKFHPDNSNLFLSGGSKGQVKLWDARTGKIVHN 186

Query: 358 YMRNLGPILDIEFSNDAKQFISSSDISKSNATENSIVVWDVLRQVPLSNQVYVEAYT 528
           Y RNLGPILD+EF+ + KQFISSSD+S+SNA+EN+I+VWDV R++PLSNQVYVEAYT
Sbjct: 187 YNRNLGPILDVEFTMNGKQFISSSDVSQSNASENAIIVWDVSREIPLSNQVYVEAYT 243


>emb|CAN83694.1| hypothetical protein VITISV_013363 [Vitis vinifera]
          Length = 297

 Score =  268 bits (685), Expect = 4e-70
 Identities = 129/170 (75%), Positives = 150/170 (88%), Gaps = 1/170 (0%)
 Frame = +1

Query: 22  AHLLASAGMDY-VCVWNVWSTEGQRKARVFNYHNAAVKHLRWSHDGLSLLSCGYDCSSRL 198
           AHLLASAGMD+ +C+WN WS + Q+KAR F+YHNAAVK ++W   GLS+LSCGYDCSSRL
Sbjct: 13  AHLLASAGMDHAICIWNAWSRD-QKKAREFSYHNAAVKDVKWLQQGLSVLSCGYDCSSRL 71

Query: 199 VDVEKGIQTQLFKEDQVLGVIKFHPDNCSLFISGGSKGLLRLWDIRVGRVVQEYMRNLGP 378
           +DVEKG+QTQ+F EDQV+GVIK HPDN +LF+SGGSKG LRLWDIR G+VV EY+R LGP
Sbjct: 72  IDVEKGLQTQIFTEDQVVGVIKLHPDNSNLFLSGGSKGRLRLWDIRTGKVVHEYIRGLGP 131

Query: 379 ILDIEFSNDAKQFISSSDISKSNATENSIVVWDVLRQVPLSNQVYVEAYT 528
           ILDIEF+ +AKQFISSSD+S SN +ENSIVVWDV RQVPLSNQVYVEAYT
Sbjct: 132 ILDIEFTVNAKQFISSSDVSGSNMSENSIVVWDVSRQVPLSNQVYVEAYT 181


Top