BLASTX nr result

ID: Coptis21_contig00005171 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00005171
         (911 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AFK37681.1| unknown [Lotus japonicus]                              281   1e-73
ref|XP_003556115.1| PREDICTED: uncharacterized protein LOC100797...   280   4e-73
ref|XP_003536460.1| PREDICTED: uncharacterized protein LOC100784...   280   4e-73
ref|XP_002321926.1| predicted protein [Populus trichocarpa] gi|2...   276   4e-72
ref|XP_003592254.1| hypothetical protein MTR_1g100800 [Medicago ...   275   8e-72

>gb|AFK37681.1| unknown [Lotus japonicus]
          Length = 248

 Score =  281 bits (719), Expect = 1e-73
 Identities = 147/253 (58%), Positives = 173/253 (68%), Gaps = 2/253 (0%)
 Frame = -1

Query: 887 MSGGVGPTGSDIKLPREEEVEMKSSNAMNTKTQ-PQSPANTTTPPRRSLLNMRQLNXXXX 711
           MSGGVGPTG DI LP+E+E+E K     N   + PQ P       +    + RQLN    
Sbjct: 1   MSGGVGPTGCDISLPKEQEIEHKEQQDSNKSLKNPQKPTR-----KAGFFSFRQLNCLAL 55

Query: 710 XXXXXXXXXXXVTDIGFVLFSTIYMFFLSRIAFPCLNNAYEPPVFGEKNKILGMYVLVAA 531
                      V D GFV+FS IYM+F+S+IAFP   N+ EP VF  +NK+LG+YVL+ A
Sbjct: 56  VIVLSASGLVSVEDFGFVVFSMIYMYFMSKIAFPLHPNSREPSVFNPQNKLLGLYVLIGA 115

Query: 530 IIGLLLPICYIFHGIFEGDKQGIKAAAPHVFLLASQVFMEGVTFSQGLSLPIRAFVPICY 351
           IIGL  PI YI  GIFEGDK+GIKAAAPHVFLLASQVFMEG+ FS G SLPIRAFVPI Y
Sbjct: 116 IIGLYAPIAYILEGIFEGDKEGIKAAAPHVFLLASQVFMEGIAFSDGFSLPIRAFVPILY 175

Query: 350 NTMRIFTIMDWLTAEIGK-VDDVDSGSDMRLYVGRGLAVANLVLWCFNLFGFLLPVYLPI 174
           N+ RIFTI++W+  EI K   D  SGS  R+Y GR LAVAN+  WCFNLFGFLLPVYLP 
Sbjct: 176 NSTRIFTILEWVKTEIYKSTSDEHSGSYRRMYAGRALAVANMAFWCFNLFGFLLPVYLPK 235

Query: 173 ALKKYYAGNKIKD 135
           A K YY+ +K K+
Sbjct: 236 AFKLYYSVHKEKE 248


>ref|XP_003556115.1| PREDICTED: uncharacterized protein LOC100797452 [Glycine max]
          Length = 249

 Score =  280 bits (715), Expect = 4e-73
 Identities = 144/249 (57%), Positives = 174/249 (69%), Gaps = 1/249 (0%)
 Frame = -1

Query: 887 MSGGVGPTGSDIKLPREEEVEMKSSNAMNTKTQPQSPANTTTPPRRSLLNMRQLNXXXXX 708
           MSGGVGPTGSDI LP+E+EV+ K     ++         TTTP + + L+ R LN     
Sbjct: 1   MSGGVGPTGSDISLPQEQEVDHKEQQEQHSLKNLHKTI-TTTPHKPTFLSFRHLNCLAVV 59

Query: 707 XXXXXXXXXXVTDIGFVLFSTIYMFFLSRIAFPCLNNAYEPP-VFGEKNKILGMYVLVAA 531
                       D  FVLFS IYM+FLS++AFP L+ + E P VF  KNK+L +YV + A
Sbjct: 60  VVLSSSGMVAPEDFAFVLFSIIYMYFLSKMAFPSLHPSKEEPLVFNPKNKLLALYVFIGA 119

Query: 530 IIGLLLPICYIFHGIFEGDKQGIKAAAPHVFLLASQVFMEGVTFSQGLSLPIRAFVPICY 351
           IIGL  PI YI  GIFEGDK+GIKAAAPHVFLL+SQVFMEGV FS   S P+RAFVP+ Y
Sbjct: 120 IIGLYAPIAYILEGIFEGDKEGIKAAAPHVFLLSSQVFMEGVAFSGMFSTPMRAFVPVFY 179

Query: 350 NTMRIFTIMDWLTAEIGKVDDVDSGSDMRLYVGRGLAVANLVLWCFNLFGFLLPVYLPIA 171
           N+ RIFTI+DWL +EI KV++  SGSD R++VGR LAVAN+  WCFNLFGFLLPVYLP  
Sbjct: 180 NSRRIFTIVDWLRSEINKVNEEHSGSDRRIFVGRVLAVANMAFWCFNLFGFLLPVYLPKV 239

Query: 170 LKKYYAGNK 144
            + YYAG+K
Sbjct: 240 FRLYYAGHK 248


>ref|XP_003536460.1| PREDICTED: uncharacterized protein LOC100784533 [Glycine max]
          Length = 249

 Score =  280 bits (715), Expect = 4e-73
 Identities = 146/249 (58%), Positives = 173/249 (69%), Gaps = 1/249 (0%)
 Frame = -1

Query: 887 MSGGVGPTGSDIKLPREEEVEMKSSNAMNTKTQPQSPANTTTPPRRSLLNMRQLNXXXXX 708
           MSGGVGPTGSDI LP+E+EV  K     ++         TTTP + + L+ R LN     
Sbjct: 1   MSGGVGPTGSDISLPQEQEVGHKEPQEQHSLKNLHKTI-TTTPHKPTFLSFRHLNCLAVV 59

Query: 707 XXXXXXXXXXVTDIGFVLFSTIYMFFLSRIAFPCLNNAYEPP-VFGEKNKILGMYVLVAA 531
                       D  FVLFS IYM+FLS++AFP L  + E P VF  KNK+L +YV V A
Sbjct: 60  VVLSASGMVAPEDFAFVLFSIIYMYFLSKMAFPSLLPSKEEPLVFNPKNKVLALYVFVGA 119

Query: 530 IIGLLLPICYIFHGIFEGDKQGIKAAAPHVFLLASQVFMEGVTFSQGLSLPIRAFVPICY 351
           IIGL  PI YI  GIFEGDK+GIKAAAPHVFLL+SQVFMEGV FS   S P+RAFVP+ Y
Sbjct: 120 IIGLYAPIAYILEGIFEGDKEGIKAAAPHVFLLSSQVFMEGVAFSGRFSTPMRAFVPVFY 179

Query: 350 NTMRIFTIMDWLTAEIGKVDDVDSGSDMRLYVGRGLAVANLVLWCFNLFGFLLPVYLPIA 171
           N+ RIFTI+DWL +EI KV++V SGSD R++VGR LAVAN+  WCFNLFGFLLPVYLP  
Sbjct: 180 NSRRIFTIVDWLRSEINKVNEVHSGSDRRIFVGRVLAVANMAFWCFNLFGFLLPVYLPKV 239

Query: 170 LKKYYAGNK 144
            + YYAG+K
Sbjct: 240 FRLYYAGHK 248


>ref|XP_002321926.1| predicted protein [Populus trichocarpa] gi|222868922|gb|EEF06053.1|
           predicted protein [Populus trichocarpa]
          Length = 248

 Score =  276 bits (707), Expect = 4e-72
 Identities = 142/251 (56%), Positives = 168/251 (66%)
 Frame = -1

Query: 887 MSGGVGPTGSDIKLPREEEVEMKSSNAMNTKTQPQSPANTTTPPRRSLLNMRQLNXXXXX 708
           MSGGVGPT +DI LP E E E K    + +   P+S   TTT  +   L+ RQLN     
Sbjct: 1   MSGGVGPTCNDISLPNEREQEQKLQEDLASLKNPKS---TTTSKKAGFLSFRQLNVLAVM 57

Query: 707 XXXXXXXXXXVTDIGFVLFSTIYMFFLSRIAFPCLNNAYEPPVFGEKNKILGMYVLVAAI 528
                       D  FV+FS IY++F S++AFP  N   +  VF  KNKIL +YV V AI
Sbjct: 58  TVFAASGMVSPEDFAFVVFSIIYLYFFSKVAFPTTNPPRDSVVFDPKNKILRLYVFVGAI 117

Query: 527 IGLLLPICYIFHGIFEGDKQGIKAAAPHVFLLASQVFMEGVTFSQGLSLPIRAFVPICYN 348
           IGL LPI YIF GIFEGDK+GIKAAAPHVFLLA+QVFMEGV  S   S+PIR FVP+ YN
Sbjct: 118 IGLFLPIAYIFEGIFEGDKEGIKAAAPHVFLLAAQVFMEGVASSDRFSIPIRVFVPVFYN 177

Query: 347 TMRIFTIMDWLTAEIGKVDDVDSGSDMRLYVGRGLAVANLVLWCFNLFGFLLPVYLPIAL 168
           + RIFT++DWL  EI K +    GS  RL++GR LAVANL  WCFNLFGFLLPVY+P A 
Sbjct: 178 SRRIFTLVDWLRDEISKAEQDYGGSTWRLHIGRALAVANLAFWCFNLFGFLLPVYIPRAF 237

Query: 167 KKYYAGNKIKD 135
           KKYY+G K+KD
Sbjct: 238 KKYYSGFKVKD 248


>ref|XP_003592254.1| hypothetical protein MTR_1g100800 [Medicago truncatula]
           gi|355481302|gb|AES62505.1| hypothetical protein
           MTR_1g100800 [Medicago truncatula]
          Length = 246

 Score =  275 bits (704), Expect = 8e-72
 Identities = 143/251 (56%), Positives = 170/251 (67%), Gaps = 2/251 (0%)
 Frame = -1

Query: 887 MSGGVGPTGSDIKLPREE-EVEMKSSNAMNTKTQPQSPANTTTPPRR-SLLNMRQLNXXX 714
           MSGGVGPTG DI LP+EE E+E K     +         +T+TP R+ S L+ RQLN   
Sbjct: 1   MSGGVGPTGCDISLPKEEQEIEHKEEQDKSLNK------STSTPQRKTSFLSFRQLNCLA 54

Query: 713 XXXXXXXXXXXXVTDIGFVLFSTIYMFFLSRIAFPCLNNAYEPPVFGEKNKILGMYVLVA 534
                         D GFVLFS IYM F+S++AFP   +  +PP+F ++ KIL +YV + 
Sbjct: 55  VVVVLSASGMVSPEDFGFVLFSVIYMCFISKVAFPSHPSKEQPPIFTQQIKILKIYVFIG 114

Query: 533 AIIGLLLPICYIFHGIFEGDKQGIKAAAPHVFLLASQVFMEGVTFSQGLSLPIRAFVPIC 354
           AIIGL  PI YI HGIFEGDK+GIKAA PHVFLLASQVFMEGV FS G S PIRAFVP+ 
Sbjct: 115 AIIGLYAPIAYILHGIFEGDKEGIKAATPHVFLLASQVFMEGVAFSNGFSSPIRAFVPVI 174

Query: 353 YNTMRIFTIMDWLTAEIGKVDDVDSGSDMRLYVGRGLAVANLVLWCFNLFGFLLPVYLPI 174
           YN+ RIFTI+DWL  EI KV +  SGS  R+Y GR LAVAN+  WCFNLFGFL+PVYLP 
Sbjct: 175 YNSRRIFTIVDWLRDEISKVGEEHSGSYKRIYAGRALAVANMAFWCFNLFGFLIPVYLPR 234

Query: 173 ALKKYYAGNKI 141
             K YY+  K+
Sbjct: 235 VFKAYYSSQKV 245


Top