BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00005036
         (1876 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN65486.1| hypothetical protein VITISV_003680 [Vitis vinifera]   243   e-126
emb|CBI33123.3| unnamed protein product [Vitis vinifera]              243   e-126
ref|XP_002262798.2| PREDICTED: transcription initiation factor I...   243   e-126
ref|XP_002519387.1| tfiif-alpha, putative [Ricinus communis] gi|...   236   e-115
ref|XP_002308775.1| predicted protein [Populus trichocarpa] gi|2...   214   e-110

>emb|CAN65486.1| hypothetical protein VITISV_003680 [Vitis vinifera]
          Length = 435

 Score =  243 bits (621), Expect(2) = e-126
 Identities = 144/289 (49%), Positives = 161/289 (55%)
 Frame = -3

Query: 1379 KNRLGLNKXXXXXXXXXXXXXXXXXXXXXXXXXXDWEHEEIFTDDDEAVGNDPEEREDLA 1200
            KNRLGLNK                          DWEHEEIFTDDDEAVGNDPEEREDLA
Sbjct: 149  KNRLGLNKRSGDDDEEGPRGGDHDLDDDDIEKGDDWEHEEIFTDDDEAVGNDPEEREDLA 208

Query: 1199 PEVPAPPEIKQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLNXXXXXXXXXXXXXXX 1020
            PEVPAPPEIKQ                                 +               
Sbjct: 209  PEVPAPPEIKQDEEDEDDSNEEEGGLSKSGKELKKLLGKAAGMNDSDAEDDDDDEEEDE- 267

Query: 1019 EIGMSPVLAPKQKDTPKEEPIDNSPSKTLAGSVXXXXXXXXXXXXXXXXXGDDTKSVNGA 840
             IG+SPVLAPKQKD PKEEP DNSP K+   S                  GDD K+ NG 
Sbjct: 268  -IGLSPVLAPKQKDVPKEEPADNSPMKSAPASARSTPPTSKSSKGKRKSNGDDMKTTNGG 326

Query: 839  SAKKAKTENDSKSSTKDGSASAPRGGTVAQKGSASTIKTESESPVGPVTEDEIRAVLLQK 660
              KK KTEN+SKSS KD   S  +    A+   +S++KT S S  GPVTEDEIRAVLLQK
Sbjct: 327  PPKKVKTENESKSSAKDEGPSPSKVTATAKGTPSSSVKTGSTSSAGPVTEDEIRAVLLQK 386

Query: 659  SPVTTQDLVAKFKSRLKGSRDKAAFADILKKISKIQKVNGSSFVVLREK 513
            +PVTTQDLVAKFK+RLK   DK AFADIL++ISKIQK NG ++VVLR+K
Sbjct: 387  APVTTQDLVAKFKARLKSQEDKKAFADILRRISKIQKTNGPNYVVLRDK 435



 Score =  237 bits (604), Expect(2) = e-126
 Identities = 114/132 (86%), Positives = 122/132 (92%), Gaps = 2/132 (1%)
 Frame = -1

Query: 1876 EKYKNKPWLLEDETGQFQYHGQLEGSQSATYYLLVMQQGKEFVAIPAGSWYNFNKVAQYK 1697
            EKYKNKPWLLEDETGQ+QYHGQLEGSQSATYYLL+MQ GKEFVAIPAGSWYNFNKVAQYK
Sbjct: 7    EKYKNKPWLLEDETGQYQYHGQLEGSQSATYYLLMMQ-GKEFVAIPAGSWYNFNKVAQYK 65

Query: 1696 QLTLEEAEEKMKNRRKTADGYQRWMMKAANNGPAAFGETEKFDEKDTGGAT--GRGNKKA 1523
            QLTLEEAEEKMKNRR+TADGYQRWMMKAANNGPAAFGE EK D+K+TGGA   GRG KK 
Sbjct: 66   QLTLEEAEEKMKNRRRTADGYQRWMMKAANNGPAAFGEVEKLDDKETGGAAGGGRGRKKQ 125

Query: 1522 TADDDEGNASDR 1487
            T D++EGN SD+
Sbjct: 126  TGDEEEGNVSDK 137


>emb|CBI33123.3| unnamed protein product [Vitis vinifera]
          Length = 539

 Score =  243 bits (620), Expect(2) = e-126
 Identities = 147/290 (50%), Positives = 163/290 (56%), Gaps = 1/290 (0%)
 Frame = -3

Query: 1379 KNRLGLNKXXXXXXXXXXXXXXXXXXXXXXXXXXDWEHEEIFTDDDEAVGNDPEEREDLA 1200
            KNRLGLNK                          DWEHEEIFTDDDEAVGNDPEEREDLA
Sbjct: 253  KNRLGLNKRSGDDDEEGPRGGDHDLDDDDIEKGDDWEHEEIFTDDDEAVGNDPEEREDLA 312

Query: 1199 PEVPAPPEIKQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLNXXXXXXXXXXXXXXX 1020
            PEVPAPPEIKQ                                 +               
Sbjct: 313  PEVPAPPEIKQDEEDEDDSNEEEGGLSKSGKELKKLLGKAAGMNDSDAEDDDDDEEEDE- 371

Query: 1019 EIGMSPVLAPKQKDTPKEEPIDNSPSKTLAGSVXXXXXXXXXXXXXXXXXGDDTKSVNGA 840
             IG+SPVLAPKQKD PKEEP DNSP K+   S                  GDD K+ NG 
Sbjct: 372  -IGLSPVLAPKQKDVPKEEPADNSPMKSATASARSTPPTSKSSKGKRKSNGDDMKTTNGG 430

Query: 839  SAKKAKTENDSKSSTKDGSASAPRGGTVAQKGS-ASTIKTESESPVGPVTEDEIRAVLLQ 663
              KK KTEN+SKSS KD   S P   T   KG+ +S++KT S S  GPVTEDEIRAVLLQ
Sbjct: 431  PPKKVKTENESKSSAKDEGPS-PSKVTATPKGTPSSSVKTGSTSSAGPVTEDEIRAVLLQ 489

Query: 662  KSPVTTQDLVAKFKSRLKGSRDKAAFADILKKISKIQKVNGSSFVVLREK 513
            K+PVTTQDLVAKFK+RLK   DK AFADIL++ISKIQK NG ++VVLR+K
Sbjct: 490  KAPVTTQDLVAKFKARLKSQEDKKAFADILRRISKIQKTNGPNYVVLRDK 539



 Score =  237 bits (604), Expect(2) = e-126
 Identities = 114/132 (86%), Positives = 122/132 (92%), Gaps = 2/132 (1%)
 Frame = -1

Query: 1876 EKYKNKPWLLEDETGQFQYHGQLEGSQSATYYLLVMQQGKEFVAIPAGSWYNFNKVAQYK 1697
            EKYKNKPWLLEDETGQ+QYHGQLEGSQSATYYLL+MQ GKEFVAIPAGSWYNFNKVAQYK
Sbjct: 111  EKYKNKPWLLEDETGQYQYHGQLEGSQSATYYLLMMQ-GKEFVAIPAGSWYNFNKVAQYK 169

Query: 1696 QLTLEEAEEKMKNRRKTADGYQRWMMKAANNGPAAFGETEKFDEKDTGGAT--GRGNKKA 1523
            QLTLEEAEEKMKNRR+TADGYQRWMMKAANNGPAAFGE EK D+K+TGGA   GRG KK 
Sbjct: 170  QLTLEEAEEKMKNRRRTADGYQRWMMKAANNGPAAFGEVEKLDDKETGGAAGGGRGRKKQ 229

Query: 1522 TADDDEGNASDR 1487
            T D++EGN SD+
Sbjct: 230  TGDEEEGNVSDK 241


>ref|XP_002262798.2| PREDICTED: transcription initiation factor IIF subunit alpha-like
            [Vitis vinifera]
          Length = 534

 Score =  243 bits (620), Expect(2) = e-126
 Identities = 147/290 (50%), Positives = 163/290 (56%), Gaps = 1/290 (0%)
 Frame = -3

Query: 1379 KNRLGLNKXXXXXXXXXXXXXXXXXXXXXXXXXXDWEHEEIFTDDDEAVGNDPEEREDLA 1200
            KNRLGLNK                          DWEHEEIFTDDDEAVGNDPEEREDLA
Sbjct: 248  KNRLGLNKRSGDDDEEGPRGGDHDLDDDDIEKGDDWEHEEIFTDDDEAVGNDPEEREDLA 307

Query: 1199 PEVPAPPEIKQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLNXXXXXXXXXXXXXXX 1020
            PEVPAPPEIKQ                                 +               
Sbjct: 308  PEVPAPPEIKQDEEDEDDSNEEEGGLSKSGKELKKLLGKAAGMNDSDAEDDDDDEEEDE- 366

Query: 1019 EIGMSPVLAPKQKDTPKEEPIDNSPSKTLAGSVXXXXXXXXXXXXXXXXXGDDTKSVNGA 840
             IG+SPVLAPKQKD PKEEP DNSP K+   S                  GDD K+ NG 
Sbjct: 367  -IGLSPVLAPKQKDVPKEEPADNSPMKSATASARSTPPTSKSSKGKRKSNGDDMKTTNGG 425

Query: 839  SAKKAKTENDSKSSTKDGSASAPRGGTVAQKGS-ASTIKTESESPVGPVTEDEIRAVLLQ 663
              KK KTEN+SKSS KD   S P   T   KG+ +S++KT S S  GPVTEDEIRAVLLQ
Sbjct: 426  PPKKVKTENESKSSAKDEGPS-PSKVTATPKGTPSSSVKTGSTSSAGPVTEDEIRAVLLQ 484

Query: 662  KSPVTTQDLVAKFKSRLKGSRDKAAFADILKKISKIQKVNGSSFVVLREK 513
            K+PVTTQDLVAKFK+RLK   DK AFADIL++ISKIQK NG ++VVLR+K
Sbjct: 485  KAPVTTQDLVAKFKARLKSQEDKKAFADILRRISKIQKTNGPNYVVLRDK 534



 Score =  237 bits (604), Expect(2) = e-126
 Identities = 114/132 (86%), Positives = 122/132 (92%), Gaps = 2/132 (1%)
 Frame = -1

Query: 1876 EKYKNKPWLLEDETGQFQYHGQLEGSQSATYYLLVMQQGKEFVAIPAGSWYNFNKVAQYK 1697
            EKYKNKPWLLEDETGQ+QYHGQLEGSQSATYYLL+MQ GKEFVAIPAGSWYNFNKVAQYK
Sbjct: 106  EKYKNKPWLLEDETGQYQYHGQLEGSQSATYYLLMMQ-GKEFVAIPAGSWYNFNKVAQYK 164

Query: 1696 QLTLEEAEEKMKNRRKTADGYQRWMMKAANNGPAAFGETEKFDEKDTGGAT--GRGNKKA 1523
            QLTLEEAEEKMKNRR+TADGYQRWMMKAANNGPAAFGE EK D+K+TGGA   GRG KK 
Sbjct: 165  QLTLEEAEEKMKNRRRTADGYQRWMMKAANNGPAAFGEVEKLDDKETGGAAGGGRGRKKQ 224

Query: 1522 TADDDEGNASDR 1487
            T D++EGN SD+
Sbjct: 225  TGDEEEGNVSDK 236


>ref|XP_002519387.1| tfiif-alpha, putative [Ricinus communis] gi|223541454|gb|EEF43004.1|
            tfiif-alpha, putative [Ricinus communis]
          Length = 533

 Score =  236 bits (602), Expect(2) = e-115
 Identities = 111/131 (84%), Positives = 120/131 (91%)
 Frame = -1

Query: 1876 EKYKNKPWLLEDETGQFQYHGQLEGSQSATYYLLVMQQGKEFVAIPAGSWYNFNKVAQYK 1697
            EKYKN+PWLLEDETGQFQY G LEGSQSATYYLL++Q GKEFVAIPA SWYNFNKVAQYK
Sbjct: 112  EKYKNRPWLLEDETGQFQYQGHLEGSQSATYYLLILQ-GKEFVAIPASSWYNFNKVAQYK 170

Query: 1696 QLTLEEAEEKMKNRRKTADGYQRWMMKAANNGPAAFGETEKFDEKDTGGATGRGNKKATA 1517
            QLTLEEAEEKM+NRRKTADGY+RWMMKAANNGPAAFGE EK D+KD+G A+GRG KKA  
Sbjct: 171  QLTLEEAEEKMRNRRKTADGYERWMMKAANNGPAAFGEVEKLDDKDSGAASGRGRKKAAG 230

Query: 1516 DDDEGNASDRG 1484
            DD+EGN SDRG
Sbjct: 231  DDEEGNVSDRG 241



 Score =  206 bits (525), Expect(2) = e-115
 Identities = 134/290 (46%), Positives = 155/290 (53%), Gaps = 1/290 (0%)
 Frame = -3

Query: 1379 KNRLGLNKXXXXXXXXXXXXXXXXXXXXXXXXXXDWEHEEIFTDDDEAVGNDPEEREDLA 1200
            KNRLGLNK                          DWEHEEIFTDDDEAVGND EEREDLA
Sbjct: 252  KNRLGLNKRGGDDDEEGPRGGDHDIDDDDIEKGDDWEHEEIFTDDDEAVGNDREEREDLA 311

Query: 1199 PEVPAPPEIKQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLNXXXXXXXXXXXXXXX 1020
            PEVPAPPEIKQ                                 N               
Sbjct: 312  PEVPAPPEIKQDEDDEDEENEEGGLSKSGKELKKLLGRAGGL--NDSDAEDDDDDDDMDE 369

Query: 1019 EIGMSPVLAPKQKDTPKEEPIDNSPSKTL-AGSVXXXXXXXXXXXXXXXXXGDDTKSVNG 843
            ++ +SPVLAPKQ  TPKEEP DNSP+K + + S                   D+ K  N 
Sbjct: 370  DVSISPVLAPKQ--TPKEEPADNSPAKPMTSASSKGTPSTSKSAKGKRKLNSDEAKQTNV 427

Query: 842  ASAKKAKTENDSKSSTKDGSASAPRGGTVAQKGSASTIKTESESPVGPVTEDEIRAVLLQ 663
            A  KK KTEN+ K + K+ SA   +  +   K +  + KT S SPV   TE+EIRAVLLQ
Sbjct: 428  APQKKVKTENELKPTVKEESAPTSKS-SATPKAAPPSAKTGSTSPV---TEEEIRAVLLQ 483

Query: 662  KSPVTTQDLVAKFKSRLKGSRDKAAFADILKKISKIQKVNGSSFVVLREK 513
              PVTTQDLVA+FKSRLK S DK AFADIL++ISKIQK +GSS+VVLR+K
Sbjct: 484  NGPVTTQDLVARFKSRLKSSEDKKAFADILRRISKIQKTSGSSYVVLRDK 533


>ref|XP_002308775.1| predicted protein [Populus trichocarpa] gi|222854751|gb|EEE92298.1|
            predicted protein [Populus trichocarpa]
          Length = 541

 Score =  214 bits (545), Expect(2) = e-110
 Identities = 109/134 (81%), Positives = 115/134 (85%), Gaps = 3/134 (2%)
 Frame = -1

Query: 1876 EKYKNKPWLLEDETGQFQYHGQLEGSQSATYYLLVMQQGKEFVAIPAGSWY--NFNKVAQ 1703
            EK+KNKPWLLEDETGQFQY G LEGSQSATYYLL+M  GKEFVAIPAGSWY  NFNKVA 
Sbjct: 111  EKFKNKPWLLEDETGQFQYQGHLEGSQSATYYLLMMS-GKEFVAIPAGSWYGYNFNKVAH 169

Query: 1702 YKQLTLEEAEEKMKNRRKTADGYQRWMMKAANNGPAAFGETEKFDEKDTGGATGR-GNKK 1526
            YKQLTLEEAEEKMKNRRKTADGY+RWMMKAA+NG AAFGE EK D+KD   A GR G KK
Sbjct: 170  YKQLTLEEAEEKMKNRRKTADGYERWMMKAAHNGAAAFGEVEKPDDKDGVSAGGRGGRKK 229

Query: 1525 ATADDDEGNASDRG 1484
            A  DDDEGN SD+G
Sbjct: 230  ANGDDDEGNVSDKG 243



 Score =  212 bits (540), Expect(2) = e-110
 Identities = 138/292 (47%), Positives = 157/292 (53%), Gaps = 3/292 (1%)
 Frame = -3

Query: 1379 KNRLGLNKXXXXXXXXXXXXXXXXXXXXXXXXXXDWEHEEIFTDDDEAVGNDPEEREDLA 1200
            K+RLGLNK                          DWEHEEIFTDDDEAV  DPEEREDLA
Sbjct: 254  KSRLGLNKGGGDDDEEGPRGGDLDMDDDDIEKGDDWEHEEIFTDDDEAVAIDPEEREDLA 313

Query: 1199 PEVPAPPEIKQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLNXXXXXXXXXXXXXXX 1020
            PEVPAPPEIKQ                                 +               
Sbjct: 314  PEVPAPPEIKQDEEDEDEENEEGGLSKSGKELKKLLGKANGLNESDAEDDDDDDDMDDD- 372

Query: 1019 EIGMSPVLAPKQKDT-PKEEPIDNSPSK-TLAGSVXXXXXXXXXXXXXXXXXGDDTKSVN 846
               +SPVLAPKQKD  PKEEP DNSP+K T  GS                   DD K+ N
Sbjct: 373  ---ISPVLAPKQKDAVPKEEPADNSPAKPTPPGSAKGTPSTSKSAKGKRKLNADDAKTSN 429

Query: 845  GASAKKAKTENDSKSSTKDGSASAPRGGTVAQKGSASTIKTESES-PVGPVTEDEIRAVL 669
            GA  KK KTEN+ K + K+ S+ A +G T   K   S+ KT   S P GPVTE+EIRAVL
Sbjct: 430  GAPVKKVKTENEVKPTVKEESSPATKG-TATPKIMPSSSKTGPTSGPTGPVTEEEIRAVL 488

Query: 668  LQKSPVTTQDLVAKFKSRLKGSRDKAAFADILKKISKIQKVNGSSFVVLREK 513
            LQ  PVTTQDLVA+FKSRL+   DK AFADIL++ISKIQK +GS+FVVLR+K
Sbjct: 489  LQNGPVTTQDLVARFKSRLRTPEDKKAFADILRRISKIQKTSGSNFVVLRDK 540